Literature DB >> 21296936

Suitability of Vader for transposon-mediated mutagenesis in Aspergillus niger.

Elkbir Hihlal1, Ilka Braumann, Marco van den Berg, Frank Kempken.   

Abstract

The filamentous fungus Aspergillus niger is widely used in biotechnological applications. Strain CBS513.88 is known to harbor 21 copies of the nonautonomous transposon Vader. Upon selection of chlorate-resistant A. niger colonies, one Vader copy was found integrated in the nirA gene. This copy was used for vector construction and development of a transposon-tagging method. Vader showed an excision frequency of about 1 in 2.2 × 10(5) conidiospores. A total of 95 of 97 colonies analyzed exhibited an excision event at the DNA level, and Vader footprints were found. By employing thermal asymmetric interlaced (TAIL)-PCR, the reintegration sites of 21 independent excision events were determined. All reintegration events occurred within or very close to genes. Therefore, this method can be used for transposon mutagenesis in A. niger.

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Year:  2011        PMID: 21296936      PMCID: PMC3067431          DOI: 10.1128/AEM.02688-10

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  21 in total

1.  Transposon impala, a novel tool for gene tagging in the rice blast fungus Magnaporthe grisea.

Authors:  F Villalba; M H Lebrun; A Hua-Van; M J Daboussi; M C Grosjean-Cournoyer
Journal:  Mol Plant Microbe Interact       Date:  2001-03       Impact factor: 4.171

Review 2.  Transposable elements in filamentous fungi.

Authors:  Marie-Josée Daboussi; Pierre Capy
Journal:  Annu Rev Microbiol       Date:  2003       Impact factor: 15.500

3.  Ds-like restless deletion derivatives occur in Tolypocladium inflatum and two foreign hosts, Neurospora crassa and Penicillium chrysogenum.

Authors:  Frank Windhofer; Katarzyna Hauck; David E A Catcheside; Ulrich Kück; Frank Kempken
Journal:  Fungal Genet Biol       Date:  2002-03       Impact factor: 3.495

4.  Tagging of a nitrogen pathway-specific regulator gene in Tolypocladium inflatum by the transposon Restless.

Authors:  F Kempken; U Kück
Journal:  Mol Gen Genet       Date:  2000-03

5.  Identification of essential genes in the human fungal pathogen Aspergillus fumigatus by transposon mutagenesis.

Authors:  Arnaud Firon; François Villalba; Roland Beffa; Christophe D'Enfert
Journal:  Eukaryot Cell       Date:  2003-04

6.  Analysis of a bacterial hygromycin B resistance gene by transcriptional and translational fusions and by DNA sequencing.

Authors:  K R Kaster; S G Burgett; R N Rao; T D Ingolia
Journal:  Nucleic Acids Res       Date:  1983-10-11       Impact factor: 16.971

7.  Heterologous transposition in Aspergillus nidulans.

Authors:  M G Li Destri Nicosia; C Brocard-Masson; S Demais; A Hua Van; M J Daboussi; C Scazzocchio
Journal:  Mol Microbiol       Date:  2001-03       Impact factor: 3.501

8.  Impala, a transposon from Fusarium oxysporum, is active in the genome of Penicillium griseoroseum.

Authors:  Marisa Vieira de Queiroz; Marie Josée Daboussi
Journal:  FEMS Microbiol Lett       Date:  2003-01-28       Impact factor: 2.742

9.  Insertion and excision of the transposable element mariner in Drosophila.

Authors:  G Bryan; D Garza; D Hartl
Journal:  Genetics       Date:  1990-05       Impact factor: 4.562

10.  Primary structure of the trpC gene from Aspergillus nidulans.

Authors:  E J Mullaney; J E Hamer; K A Roberti; M M Yelton; W E Timberlake
Journal:  Mol Gen Genet       Date:  1985
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  2 in total

1.  Random mutagenesis analysis and identification of a novel C2H2-type transcription factor from the nematode-trapping fungus Arthrobotrys oligospora.

Authors:  Dewei Jiang; Jing Zhou; Guizhen Bai; Xinjing Xing; Liyan Tang; Xuewei Yang; Juan Li; Ke-Qin Zhang; Jinkui Yang
Journal:  Sci Rep       Date:  2017-07-17       Impact factor: 4.379

2.  Uncovering the genome-wide transcriptional responses of the filamentous fungus Aspergillus niger to lignocellulose using RNA sequencing.

Authors:  Stéphane Delmas; Steven T Pullan; Sanyasi Gaddipati; Matthew Kokolski; Sunir Malla; Martin J Blythe; Roger Ibbett; Maria Campbell; Susan Liddell; Aziz Aboobaker; Gregory A Tucker; David B Archer
Journal:  PLoS Genet       Date:  2012-08-09       Impact factor: 5.917

  2 in total

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