Literature DB >> 21294639

SOLID3: a multiplex antibody microarray-based optical sensor instrument for in situ life detection in planetary exploration.

Víctor Parro1, Graciela de Diego-Castilla, José A Rodríguez-Manfredi, Luis A Rivas, Yolanda Blanco-López, Eduardo Sebastián, Julio Romeral, Carlos Compostizo, Pedro L Herrero, Adolfo García-Marín, Mercedes Moreno-Paz, Miriam García-Villadangos, Patricia Cruz-Gil, Verónica Peinado, Javier Martín-Soler, Juan Pérez-Mercader, Javier Gómez-Elvira.   

Abstract

The search for unequivocal signs of life on other planetary bodies is one of the major challenges for astrobiology. The failure to detect organic molecules on the surface of Mars by measuring volatile compounds after sample heating, together with the new knowledge of martian soil chemistry, has prompted the astrobiological community to develop new methods and technologies. Based on protein microarray technology, we have designed and built a series of instruments called SOLID (for "Signs Of LIfe Detector") for automatic in situ detection and identification of substances or analytes from liquid and solid samples (soil, sediments, or powder). Here, we present the SOLID3 instrument, which is able to perform both sandwich and competitive immunoassays and consists of two separate functional units: a Sample Preparation Unit (SPU) for 10 different extractions by ultrasonication and a Sample Analysis Unit (SAU) for fluorescent immunoassays. The SAU consists of five different flow cells, with an antibody microarray in each one (2000 spots). It is also equipped with an exclusive optical package and a charge-coupled device (CCD) for fluorescent detection. We demonstrated the performance of SOLID3 in the detection of a broad range of molecular-sized compounds, which range from peptides and proteins to whole cells and spores, with sensitivities at 1-2 ppb (ng mL⁻¹) for biomolecules and 10⁴ to 10³ spores per milliliter. We report its application in the detection of acidophilic microorganisms in the Río Tinto Mars analogue and report the absence of substantial negative effects on the immunoassay in the presence of 50 mM perchlorate (20 times higher than that found at the Phoenix landing site). Our SOLID instrument concept is an excellent option with which to detect biomolecules because it avoids the high-temperature treatments that may destroy organic matter in the presence of martian oxidants.

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Year:  2011        PMID: 21294639     DOI: 10.1089/ast.2010.0501

Source DB:  PubMed          Journal:  Astrobiology        ISSN: 1557-8070            Impact factor:   4.335


  20 in total

1.  A microbial oasis in the hypersaline Atacama subsurface discovered by a life detector chip: implications for the search for life on Mars.

Authors:  Victor Parro; Graciela de Diego-Castilla; Mercedes Moreno-Paz; Yolanda Blanco; Patricia Cruz-Gil; José A Rodríguez-Manfredi; David Fernández-Remolar; Felipe Gómez; Manuel J Gómez; Luis A Rivas; Cecilia Demergasso; Alex Echeverría; Viviana N Urtuvia; Marta Ruiz-Bermejo; Miriam García-Villadangos; Marina Postigo; Mónica Sánchez-Román; Guillermo Chong-Díaz; Javier Gómez-Elvira
Journal:  Astrobiology       Date:  2011-12-09       Impact factor: 4.335

2.  Detection of peptidic sequences in the ancient acidic sediments of Río Tinto, Spain.

Authors:  María Colín-García; Basem Kanawati; Mourad Harir; Phillippe Schmitt-Kopplin; Ricardo Amils; Victor Parro; Miriam García; David Fernández-Remolar
Journal:  Orig Life Evol Biosph       Date:  2011-12-03       Impact factor: 1.950

3.  Preservation of Biomarkers from Cyanobacteria Mixed with Mars-Like Regolith Under Simulated Martian Atmosphere and UV Flux.

Authors:  Mickael Baqué; Cyprien Verseux; Ute Böttger; Elke Rabbow; Jean-Pierre Paul de Vera; Daniela Billi
Journal:  Orig Life Evol Biosph       Date:  2015-11-03       Impact factor: 1.950

4.  Experimental Protocol for Detecting Cyanobacteria in Liquid and Solid Samples with an Antibody Microarray Chip.

Authors:  Yolanda Blanco; Mercedes Moreno-Paz; Victor Parro
Journal:  J Vis Exp       Date:  2017-02-07       Impact factor: 1.355

5.  Focused ultrasound extraction versus microwave-assisted extraction for extraterrestrial objects analysis.

Authors:  Ramzi Timoumi; Pascaline François; Aurelie Le Postollec; Michel Dobrijevic; Brian Grégoire; Pauline Poinot; Claude Geffroy-Rodier
Journal:  Anal Bioanal Chem       Date:  2022-03-10       Impact factor: 4.142

6.  Effects of Gamma and Electron Radiation on the Structural Integrity of Organic Molecules and Macromolecular Biomarkers Measured by Microarray Immunoassays and Their Astrobiological Implications.

Authors:  Yolanda Blanco; Graciela de Diego-Castilla; Daniel Viúdez-Moreiras; Erika Cavalcante-Silva; José Antonio Rodríguez-Manfredi; Alfonso F Davila; Christopher P McKay; Victor Parro
Journal:  Astrobiology       Date:  2018-08-02       Impact factor: 4.335

7.  Detection of macromolecules in desert cyanobacteria mixed with a lunar mineral analogue after space simulations.

Authors:  Mickael Baqué; Cyprien Verseux; Elke Rabbow; Jean-Pierre Paul de Vera; Daniela Billi
Journal:  Orig Life Evol Biosph       Date:  2014-10-30       Impact factor: 1.950

Review 8.  Biota and biomolecules in extreme environments on Earth: implications for life detection on Mars.

Authors:  Joost W Aerts; Wilfred F M Röling; Andreas Elsaesser; Pascale Ehrenfreund
Journal:  Life (Basel)       Date:  2014-10-13

9.  In Situ Field Sequencing and Life Detection in Remote (79°26'N) Canadian High Arctic Permafrost Ice Wedge Microbial Communities.

Authors:  J Goordial; Ianina Altshuler; Katherine Hindson; Kelly Chan-Yam; Evangelos Marcolefas; Lyle G Whyte
Journal:  Front Microbiol       Date:  2017-12-20       Impact factor: 5.640

10.  Is Searching for Martian Life a Priority for the Mars Community?

Authors:  Alberto G Fairén; Victor Parro; Dirk Schulze-Makuch; Lyle Whyte
Journal:  Astrobiology       Date:  2018-01-23       Impact factor: 4.335

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