Literature DB >> 21290439

Broadening deoxysugar glycodiversity: natural and engineered transaldolases unlock a complementary substrate space.

Madhura Rale1, Sarah Schneider, Georg A Sprenger, Anne K Samland, Wolf-Dieter Fessner.   

Abstract

The majority of prokaryotic drugs are produced in glycosylated form, with the deoxygenation level in the sugar moiety having a profound influence on the drug's bioprofile. Chemical deoxygenation is challenging due to the need for tedious protective group manipulations. For a direct biocatalytic de novo generation of deoxysugars by carboligation, with regiocontrol over deoxygenation sites determined by the choice of enzyme and aldol components, we have investigated the substrate scope of the F178Y mutant of transaldolase B, TalB(F178Y), and fructose 6-phosphate aldolase, FSA, from E. coli against a panel of variously deoxygenated aldehydes and ketones as aldol acceptors and donors, respectively. Independent of substrate structure, both enzymes catalyze a stereospecific carboligation resulting in the D-threo configuration. In combination, these enzymes have allowed the preparation of a total of 22 out of 24 deoxygenated ketose-type products, many of which are inaccessible by available enzymes, from a [3×8] substrate matrix. Although aliphatic and hydroxylated aliphatic aldehydes were good substrates, D-lactaldehyde was found to be an inhibitor possibly as a consequence of inactive substrate binding to the catalytic Lys residue. A 1-hydroxy-2-alkanone moiety was identified as a common requirement for the donor substrate, whereas propanone and butanone were inactive. For reactions involving dihydroxypropanone, TalB(F178Y) proved to be the superior catalyst, whereas for reactions involving 1-hydroxybutanone, FSA is the only choice; for conversions using hydroxypropanone, both TalB(F178Y) and FSA are suitable. Structure-guided mutagenesis of Ser176 to Ala in the distant binding pocket of TalB(F178Y), in analogy with the FSA active site, further improved the acceptance of hydroxypropanone. Together, these catalysts are valuable new entries to an expanding toolbox of biocatalytic carboligation and complement each other well in their addressable constitutional space for the stereospecific preparation of deoxysugars.
Copyright © 2011 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

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Year:  2011        PMID: 21290439     DOI: 10.1002/chem.201002942

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  7 in total

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2.  Redesign of substrate specificity and identification of the aminoglycoside binding residues of Eis from Mycobacterium tuberculosis.

Authors:  Benjamin C Jennings; Kristin J Labby; Keith D Green; Sylvie Garneau-Tsodikova
Journal:  Biochemistry       Date:  2013-07-16       Impact factor: 3.162

Review 3.  Anticancer agents that counteract tumor glycolysis.

Authors:  Carlotta Granchi; Filippo Minutolo
Journal:  ChemMedChem       Date:  2012-06-08       Impact factor: 3.466

Review 4.  Computational tools for rational protein engineering of aldolases.

Authors:  Michael Widmann; Jürgen Pleiss; Anne K Samland
Journal:  Comput Struct Biotechnol J       Date:  2012-11-13       Impact factor: 7.271

5.  Complete Switch of Reaction Specificity of an Aldolase by Directed Evolution In Vitro: Synthesis of Generic Aliphatic Aldol Products.

Authors:  Sebastian Junker; Raquel Roldan; Henk-Jan Joosten; Pere Clapés; Wolf-Dieter Fessner
Journal:  Angew Chem Int Ed Engl       Date:  2018-07-04       Impact factor: 15.336

6.  Non-natural Aldol Reactions Enable the Design and Construction of Novel One-Carbon Assimilation Pathways in vitro.

Authors:  Yufeng Mao; Qianqian Yuan; Xue Yang; Pi Liu; Ying Cheng; Jiahao Luo; Huanhuan Liu; Yonghong Yao; Hongbing Sun; Tao Cai; Hongwu Ma
Journal:  Front Microbiol       Date:  2021-06-02       Impact factor: 5.640

7.  Biocatalytic Aldol Addition of Simple Aliphatic Nucleophiles to Hydroxyaldehydes.

Authors:  Raquel Roldán; Karel Hernandez; Jesús Joglar; Jordi Bujons; Teodor Parella; Israel Sánchez-Moreno; Virgil Hélaine; Marielle Lemaire; Christine Guérard-Hélaine; Wolf-Dieter Fessner; Pere Clapés
Journal:  ACS Catal       Date:  2018-08-08       Impact factor: 13.084

  7 in total

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