Literature DB >> 21288763

Pervasive regulation of nucleoid structure and function by nucleoid-associated proteins.

Sylvie Rimsky1, Andrew Travers.   

Abstract

Bacterial DNA is organised in a compact nucleoid body that is tightly associated with the coupled transcription and translation of mRNAs. This structure contains abundant DNA-binding proteins which perform both structural and regulatory roles, and, in Escherichia coli, serve to buffer and organise pervasive DNA superhelicity. We argue that NAPs coordinate regulation of gene expression and superhelicity at the global (or chromosomal) and at local (corresponding to promoter activity and genetic recombination) levels.
Copyright © 2011. Published by Elsevier Ltd.

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Year:  2011        PMID: 21288763     DOI: 10.1016/j.mib.2011.01.003

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  49 in total

1.  Gene order and chromosome dynamics coordinate spatiotemporal gene expression during the bacterial growth cycle.

Authors:  Patrick Sobetzko; Andrew Travers; Georgi Muskhelishvili
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-19       Impact factor: 11.205

Review 2.  Integration of syntactic and semantic properties of the DNA code reveals chromosomes as thermodynamic machines converting energy into information.

Authors:  Georgi Muskhelishvili; Andrew Travers
Journal:  Cell Mol Life Sci       Date:  2013-06-15       Impact factor: 9.261

3.  Involvement of the global regulator H-NS in the survival of Escherichia coli in stationary phase.

Authors:  Savita Chib; Subramony Mahadevan
Journal:  J Bacteriol       Date:  2012-07-27       Impact factor: 3.490

Review 4.  Maintenance of chromosome structure in Pseudomonas aeruginosa.

Authors:  Valentin V Rybenkov
Journal:  FEMS Microbiol Lett       Date:  2014-06-12       Impact factor: 2.742

Review 5.  MukBEF, a chromosomal organizer.

Authors:  Valentin V Rybenkov; Viridiana Herrera; Zoya M Petrushenko; Hang Zhao
Journal:  J Mol Microbiol Biotechnol       Date:  2015-02-17

6.  DNA-Binding Properties of African Swine Fever Virus pA104R, a Histone-Like Protein Involved in Viral Replication and Transcription.

Authors:  Gonçalo Frouco; Ferdinando B Freitas; João Coelho; Alexandre Leitão; Carlos Martins; Fernando Ferreira
Journal:  J Virol       Date:  2017-05-26       Impact factor: 5.103

7.  Biophysics of protein-DNA interactions and chromosome organization.

Authors:  John F Marko
Journal:  Physica A       Date:  2015-01-15       Impact factor: 3.263

8.  HupB, a nucleoid-associated protein of Mycobacterium tuberculosis, is modified by serine/threonine protein kinases in vivo.

Authors:  Meetu Gupta; Andaleeb Sajid; Kirti Sharma; Soumitra Ghosh; Gunjan Arora; Ramandeep Singh; Valakunja Nagaraja; Vibha Tandon; Yogendra Singh
Journal:  J Bacteriol       Date:  2014-05-09       Impact factor: 3.490

Review 9.  Chromosome architecture is a key element of bacterial cellular organization.

Authors:  Jerod L Ptacin; Lucy Shapiro
Journal:  Cell Microbiol       Date:  2012-11-20       Impact factor: 3.715

10.  Variation of the folding and dynamics of the Escherichia coli chromosome with growth conditions.

Authors:  Nastaran Hadizadeh Yazdi; Calin C Guet; Reid C Johnson; John F Marko
Journal:  Mol Microbiol       Date:  2012-12       Impact factor: 3.501

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