Literature DB >> 21288713

Structural regulation of cullin-RING ubiquitin ligase complexes.

David M Duda1, Daniel C Scott, Matthew F Calabrese, Erik S Zimmerman, Ning Zheng, Brenda A Schulman.   

Abstract

Cullin-RING ligases (CRLs) compose the largest class of E3 ubiquitin ligases. CRLs are modular, multisubunit enzymes, comprising interchangeable substrate receptors dedicated to particular Cullin-RING catalytic cores. Recent structural studies have revealed numerous ways in which CRL E3 ligase activities are controlled, including multimodal E3 ligase activation by covalent attachment of the ubiquitin-like protein NEDD8, inhibition of CRL assembly/activity by CAND1, and several mechanisms of regulated substrate recruitment. These features highlight the potential for CRL activities to be tuned in responses to diverse cellular cues, and for modulating CRL functions through small-molecule agonists or antagonists. As the second installment of a two-review series, this article focuses on recent structural studies advancing our knowledge of how CRL activities are regulated.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21288713      PMCID: PMC3151539          DOI: 10.1016/j.sbi.2011.01.003

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  48 in total

1.  The bacterial effector Cif interferes with SCF ubiquitin ligase function by inhibiting deneddylation of Cullin1.

Authors:  Hanako Morikawa; Minsoo Kim; Hitomi Mimuro; Claire Punginelli; Tomohiro Koyama; Shinya Nagai; Atsushi Miyawaki; Kazuhiro Iwai; Chihiro Sasakawa
Journal:  Biochem Biophys Res Commun       Date:  2010-09-17       Impact factor: 3.575

2.  Suprafacial orientation of the SCFCdc4 dimer accommodates multiple geometries for substrate ubiquitination.

Authors:  Xiaojing Tang; Stephen Orlicky; Zhenyuan Lin; Andrew Willems; Dante Neculai; Derek Ceccarelli; Frank Mercurio; Brian H Shilton; Frank Sicheri; Mike Tyers
Journal:  Cell       Date:  2007-06-15       Impact factor: 41.582

3.  Mechanism of auxin perception by the TIR1 ubiquitin ligase.

Authors:  Xu Tan; Luz Irina A Calderon-Villalobos; Michal Sharon; Changxue Zheng; Carol V Robinson; Mark Estelle; Ning Zheng
Journal:  Nature       Date:  2007-04-05       Impact factor: 49.962

4.  Symmetrical modularity of the COP9 signalosome complex suggests its multifunctionality.

Authors:  Michal Sharon; Haibin Mao; Elisabetta Boeri Erba; Elaine Stephens; Ning Zheng; Carol V Robinson
Journal:  Structure       Date:  2009-01-14       Impact factor: 5.006

5.  Promotion of NEDD-CUL1 conjugate cleavage by COP9 signalosome.

Authors:  S Lyapina; G Cope; A Shevchenko; G Serino; T Tsuge; C Zhou; D A Wolf; N Wei; A Shevchenko; R J Deshaies
Journal:  Science       Date:  2001-05-03       Impact factor: 47.728

6.  Structural basis of sugar-recognizing ubiquitin ligase.

Authors:  Tsunehiro Mizushima; Takeshi Hirao; Yukiko Yoshida; Soo Jae Lee; Tomoki Chiba; Kazuhiro Iwai; Yoshiki Yamaguchi; Koichi Kato; Tomitake Tsukihara; Keiji Tanaka
Journal:  Nat Struct Mol Biol       Date:  2004-02-29       Impact factor: 15.369

7.  Structure of a beta-TrCP1-Skp1-beta-catenin complex: destruction motif binding and lysine specificity of the SCF(beta-TrCP1) ubiquitin ligase.

Authors:  Geng Wu; Guozhou Xu; Brenda A Schulman; Philip D Jeffrey; J Wade Harper; Nikola P Pavletich
Journal:  Mol Cell       Date:  2003-06       Impact factor: 17.970

8.  E2-RING expansion of the NEDD8 cascade confers specificity to cullin modification.

Authors:  Danny T Huang; Olivier Ayrault; Harold W Hunt; Asad M Taherbhoy; David M Duda; Daniel C Scott; Laura A Borg; Geoffrey Neale; Peter J Murray; Martine F Roussel; Brenda A Schulman
Journal:  Mol Cell       Date:  2009-02-27       Impact factor: 17.970

9.  Glutamine deamidation and dysfunction of ubiquitin/NEDD8 induced by a bacterial effector family.

Authors:  Jixin Cui; Qing Yao; Shan Li; Xiaojun Ding; Qiuhe Lu; Haibin Mao; Liping Liu; Ning Zheng; She Chen; Feng Shao
Journal:  Science       Date:  2010-08-05       Impact factor: 47.728

10.  Multimodal activation of the ubiquitin ligase SCF by Nedd8 conjugation.

Authors:  Anjanabha Saha; Raymond J Deshaies
Journal:  Mol Cell       Date:  2008-10-10       Impact factor: 17.970

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  104 in total

1.  Structural basis for autoinhibition and phosphorylation-dependent activation of c-Cbl.

Authors:  Hao Dou; Lori Buetow; Andreas Hock; Gary J Sibbet; Karen H Vousden; Danny T Huang
Journal:  Nat Struct Mol Biol       Date:  2012-01-22       Impact factor: 15.369

Review 2.  Regulation of Parkin E3 ubiquitin ligase activity.

Authors:  Helen Walden; R Julio Martinez-Torres
Journal:  Cell Mol Life Sci       Date:  2012-04-19       Impact factor: 9.261

Review 3.  Shaping the landscape: mechanistic consequences of ubiquitin modification of chromatin.

Authors:  Sigurd Braun; Hiten D Madhani
Journal:  EMBO Rep       Date:  2012-06-29       Impact factor: 8.807

4.  Cullin neddylation may allosterically tune polyubiquitin chain length and topology.

Authors:  Melis Onel; Fidan Sumbul; Jin Liu; Ruth Nussinov; Turkan Haliloglu
Journal:  Biochem J       Date:  2017-02-20       Impact factor: 3.857

5.  SCFFBXO22 targets HDM2 for degradation and modulates breast cancer cell invasion and metastasis.

Authors:  Jin Bai; Kenneth Wu; Meng-Han Cao; Yingying Yang; Yu Pan; Hui Liu; Yizhou He; Yoko Itahana; Lan Huang; Jun-Nian Zheng; Zhen-Qiang Pan
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-28       Impact factor: 11.205

Review 6.  Ubiquitination-mediated degradation of cell cycle-related proteins by F-box proteins.

Authors:  Nana Zheng; Zhiwei Wang; Wenyi Wei
Journal:  Int J Biochem Cell Biol       Date:  2016-02-06       Impact factor: 5.085

7.  Constitutive activation of the Nrf2/Keap1 pathway in insecticide-resistant strains of Drosophila.

Authors:  Jyoti R Misra; Geanette Lam; Carl S Thummel
Journal:  Insect Biochem Mol Biol       Date:  2013-10-05       Impact factor: 4.714

8.  The SCFβ-TRCP E3 ubiquitin ligase complex targets Lipin1 for ubiquitination and degradation to promote hepatic lipogenesis.

Authors:  Kouhei Shimizu; Hidefumi Fukushima; Kohei Ogura; Evan C Lien; Naoe Taira Nihira; Jinfang Zhang; Brian J North; Ailan Guo; Katsuyuki Nagashima; Tadashi Nakagawa; Seira Hoshikawa; Asami Watahiki; Koji Okabe; Aya Yamada; Alex Toker; John M Asara; Satoshi Fukumoto; Keiichi I Nakayama; Keiko Nakayama; Hiroyuki Inuzuka; Wenyi Wei
Journal:  Sci Signal       Date:  2017-01-03       Impact factor: 8.192

9.  Conformational flexibility and rotation of the RING domain in activation of cullin-RING ligases.

Authors:  Simin Rahighi; Ivan Dikic
Journal:  Nat Struct Mol Biol       Date:  2011-08-03       Impact factor: 15.369

Review 10.  Structural and functional insights to ubiquitin-like protein conjugation.

Authors:  Frederick C Streich; Christopher D Lima
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

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