Literature DB >> 21287613

Structures of parasitic CDPK domains point to a common mechanism of activation.

Amy K Wernimont1, Merhnaz Amani, Wei Qiu, Juan C Pizarro, Jennifer D Artz, Yu-Hui Lin, Jocelyn Lew, Ashley Hutchinson, Raymond Hui.   

Abstract

We recently determined the first structures of inactivated and calcium-activated calcium-dependent protein kinases (CDPKs) from Apicomplexa. Calcium binding triggered a large conformational change that constituted a new mechanism in calcium signaling and a novel EF-hand fold (CAD, for CDPK activation domain). Thus we set out to determine if this mechanism was universal to all CDPKs. We solved additional CDPK structures, including one from the species Plasmodium. We highlight the similarities in sequence and structure across apicomplexan and plant CDPKs, and strengthen our observations that this novel mechanism could be universal to canonical CDPKs. Our new structures demonstrate more detailed steps in the mechanism of calcium activation and possible key players in regulation. Residues involved in making the largest conformational change are the most conserved across Apicomplexa, leading us to propose that the mechanism is indeed conserved. CpCDPK3_CAD and PfCDPK_CAD were captured at a possible intermediate conformation, lending insight into the order of activation steps. PfCDPK3_CAD adopts an activated fold, despite having an inactive EF-hand sequence in the N-terminal lobe. We propose that for most apicomplexan CDPKs, the mode of activation will be similar to that seen in our structures, while specific regulation of the inactive and active forms will require further investigation.
Copyright © 2010 Wiley-Liss, Inc.

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Year:  2010        PMID: 21287613     DOI: 10.1002/prot.22919

Source DB:  PubMed          Journal:  Proteins        ISSN: 0887-3585


  36 in total

1.  Autophosphorylation Affects Substrate-Binding Affinity of Tobacco Ca2+-Dependent Protein Kinase1.

Authors:  Takeshi Ito; Sarahmi Ishida; Shota Oe; Jutarou Fukazawa; Yohsuke Takahashi
Journal:  Plant Physiol       Date:  2017-06-21       Impact factor: 8.340

2.  Novel insights into the regulation of malarial calcium-dependent protein kinase 1.

Authors:  Anwar Ahmed; Kavita Gaadhe; Guru Prasad Sharma; Narendra Kumar; Mirela Neculai; Raymond Hui; Debasisa Mohanty; Pushkar Sharma
Journal:  FASEB J       Date:  2012-04-25       Impact factor: 5.191

Review 3.  Calcium and reactive oxygen species rule the waves of signaling.

Authors:  Leonie Steinhorst; Jörg Kudla
Journal:  Plant Physiol       Date:  2013-07-29       Impact factor: 8.340

Review 4.  Calcium-dependent protein kinases: hubs in plant stress signaling and development.

Authors:  Philipp Schulz; Marco Herde; Tina Romeis
Journal:  Plant Physiol       Date:  2013-09-06       Impact factor: 8.340

5.  The Toxoplasma gondii calcium-dependent protein kinase 7 is involved in early steps of parasite division and is crucial for parasite survival.

Authors:  Juliette Morlon-Guyot; Laurence Berry; Chun-Ti Chen; Marc-Jan Gubbels; Maryse Lebrun; Wassim Daher
Journal:  Cell Microbiol       Date:  2013-09-09       Impact factor: 3.715

6.  Analysis of Noncanonical Calcium-Dependent Protein Kinases in Toxoplasma gondii by Targeted Gene Deletion Using CRISPR/Cas9.

Authors:  Shaojun Long; Qiuling Wang; L David Sibley
Journal:  Infect Immun       Date:  2016-04-22       Impact factor: 3.441

7.  CDPKs of Cryptosporidium parvum--stage-specific expression in vitro.

Authors:  Manja Etzold; Matthias Lendner; Arwid Daugschies; Viktor Dyachenko
Journal:  Parasitol Res       Date:  2014-05-09       Impact factor: 2.289

8.  Genome-wide identification, classification, and expression analysis of CDPK and its closely related gene families in poplar (Populus trichocarpa).

Authors:  Ran Zuo; Ruibo Hu; Guohua Chai; Meiling Xu; Guang Qi; Yingzhen Kong; Gongke Zhou
Journal:  Mol Biol Rep       Date:  2012-12-15       Impact factor: 2.316

9.  Structure of the STRA6 receptor for retinol uptake.

Authors:  Yunting Chen; Oliver B Clarke; Jonathan Kim; Sean Stowe; Youn-Kyung Kim; Zahra Assur; Michael Cavalier; Raquel Godoy-Ruiz; Desiree C von Alpen; Chiara Manzini; William S Blaner; Joachim Frank; Loredana Quadro; David J Weber; Lawrence Shapiro; Wayne A Hendrickson; Filippo Mancia
Journal:  Science       Date:  2016-08-26       Impact factor: 47.728

10.  Optimizing small molecule inhibitors of calcium-dependent protein kinase 1 to prevent infection by Toxoplasma gondii.

Authors:  Sebastian Lourido; Chao Zhang; Michael S Lopez; Keliang Tang; Jennifer Barks; Qiuling Wang; Scott A Wildman; Kevan M Shokat; L David Sibley
Journal:  J Med Chem       Date:  2013-03-26       Impact factor: 7.446

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