Literature DB >> 21287273

Recent progresses on the genetic basis of the regulation of CO2 acquisition systems in response to CO2 concentration.

Yusuke Matsuda1, Kensuke Nakajima, Masaaki Tachibana.   

Abstract

Marine diatoms, the major primary producer in ocean environment, are known to take up both CO(2) and HCO(3)(-) in seawater and efficiently concentrate them intracellularly, which enable diatom cells to perform high-affinity photosynthesis under limiting CO(2). However, mechanisms so far proposed for the inorganic carbon acquisition in marine diatoms are significantly diverse despite that physiological studies on this aspect have been done with only limited number of species. There are two major hypotheses about this; that is, they take up and concentrate both CO(2) and HCO(3)(-) as inorganic forms, and efficiently supply CO(2) to Rubisco by an aid of carbonic anhydrases (biophysical CO(2)-concentrating mechanism: CCM); and as the other hypothesis, biochemical conversion of HCO(3)(-) into C(4) compounds may play a major role to supply concentrated CO(2) to Rubisco. At moment however, physiological evidence for these hypotheses were not related well to molecular level evidence. In this study, recent progresses in molecular studies on diatom-carbon-metabolism genes were related to the physiological aspects of carbon acquisition. Furthermore, we discussed the mechanisms regulating CO(2) acquisition systems in response to changes in pCO(2). Recent findings about the participation of cAMP in the signaling pathway of CO(2) concentration strongly suggested the occurrences of mammalian-type-signaling pathways in diatoms to respond to changes in pCO(2). In fact, there were considerable numbers of putative adenylyl cyclases, which may take part in the processes of CO(2) signal capturing.

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Year:  2011        PMID: 21287273     DOI: 10.1007/s11120-011-9623-7

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  68 in total

1.  Blue light stimulates cyanobacterial motility via a cAMP signal transduction system.

Authors:  Kazuki Terauchi; Masayuki Ohmori
Journal:  Mol Microbiol       Date:  2004-04       Impact factor: 3.501

2.  Genomic footprints of a cryptic plastid endosymbiosis in diatoms.

Authors:  Ahmed Moustafa; Bánk Beszteri; Uwe G Maier; Chris Bowler; Klaus Valentin; Debashish Bhattacharya
Journal:  Science       Date:  2009-06-26       Impact factor: 47.728

3.  Light-Induced Carbonic Anhydrase Expression in Chlamydomonas reinhardtii.

Authors:  M L Dionisio-Sese; H Fukuzawa; S Miyachi
Journal:  Plant Physiol       Date:  1990-11       Impact factor: 8.340

4.  Unicellular C4 photosynthesis in a marine diatom.

Authors:  J R Reinfelder; A M Kraepiel; F M Morel
Journal:  Nature       Date:  2000-10-26       Impact factor: 49.962

5.  Expression and inhibition of the carboxylating and decarboxylating enzymes in the photosynthetic C4 pathway of marine diatoms.

Authors:  Patrick J McGinn; François M M Morel
Journal:  Plant Physiol       Date:  2007-11-09       Impact factor: 8.340

6.  Induction of CO2 and Bicarbonate Transport in the Green Alga Chlorella ellipsoidea (I. Time Course of Induction of the Two Systems).

Authors:  Y. Matsuda; B. Colman
Journal:  Plant Physiol       Date:  1995-05       Impact factor: 8.340

Review 7.  Signal transduction in the sexual life of Chlamydomonas.

Authors:  L M Quarmby
Journal:  Plant Mol Biol       Date:  1994-12       Impact factor: 4.076

8.  A defined subset of adenylyl cyclases is regulated by bicarbonate ion.

Authors:  Martin J Cann; Arne Hammer; Jie Zhou; Tobias Kanacher
Journal:  J Biol Chem       Date:  2003-06-26       Impact factor: 5.157

9.  A model for carbohydrate metabolism in the diatom Phaeodactylum tricornutum deduced from comparative whole genome analysis.

Authors:  Peter G Kroth; Anthony Chiovitti; Ansgar Gruber; Veronique Martin-Jezequel; Thomas Mock; Micaela Schnitzler Parker; Michele S Stanley; Aaron Kaplan; Lise Caron; Till Weber; Uma Maheswari; E Virginia Armbrust; Chris Bowler
Journal:  PLoS One       Date:  2008-01-09       Impact factor: 3.240

10.  The role of the C4 pathway in carbon accumulation and fixation in a marine diatom.

Authors:  John R Reinfelder; Allen J Milligan; François M M Morel
Journal:  Plant Physiol       Date:  2004-07-30       Impact factor: 8.340

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  19 in total

1.  Inorganic carbon utilization by aquatic photoautotrophs and potential usages of algal primary production.

Authors:  Yusuke Matsuda
Journal:  Photosynth Res       Date:  2011-09-10       Impact factor: 3.573

2.  The minimal CO2-concentrating mechanism of Prochlorococcus spp. MED4 is effective and efficient.

Authors:  Brian M Hopkinson; Jodi N Young; Anna L Tansik; Brian J Binder
Journal:  Plant Physiol       Date:  2014-10-14       Impact factor: 8.340

Review 3.  The role of intraspecific variation in the ecological and evolutionary success of diatoms in changing environments.

Authors:  Anna Godhe; Tatiana Rynearson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-09-05       Impact factor: 6.237

4.  Localization of putative carbonic anhydrases in the marine diatom, Thalassiosira pseudonana.

Authors:  Mio Samukawa; Chen Shen; Brian M Hopkinson; Yusuke Matsuda
Journal:  Photosynth Res       Date:  2014-01-11       Impact factor: 3.573

5.  Localization of enzymes relating to C4 organic acid metabolisms in the marine diatom, Thalassiosira pseudonana.

Authors:  Rie Tanaka; Sae Kikutani; Anggara Mahardika; Yusuke Matsuda
Journal:  Photosynth Res       Date:  2014-01-11       Impact factor: 3.573

6.  The intracellular distribution of inorganic carbon fixing enzymes does not support the presence of a C4 pathway in the diatom Phaeodactylum tricornutum.

Authors:  Daniela Ewe; Masaaki Tachibana; Sae Kikutani; Ansgar Gruber; Carolina Río Bártulos; Grzegorz Konert; Aaron Kaplan; Yusuke Matsuda; Peter G Kroth
Journal:  Photosynth Res       Date:  2018-03-23       Impact factor: 3.573

7.  A transcriptional regulator Sll0794 regulates tolerance to biofuel ethanol in photosynthetic Synechocystis sp. PCC 6803.

Authors:  Zhongdi Song; Lei Chen; Jiangxin Wang; Yinhua Lu; Weihong Jiang; Weiwen Zhang
Journal:  Mol Cell Proteomics       Date:  2014-09-19       Impact factor: 5.911

8.  CO(2)-cAMP-responsive cis-elements targeted by a transcription factor with CREB/ATF-like basic zipper domain in the marine diatom Phaeodactylum tricornutum.

Authors:  Naoki Ohno; Takuya Inoue; Ryosuke Yamashiki; Kensuke Nakajima; Yuhei Kitahara; Mikiko Ishibashi; Yusuke Matsuda
Journal:  Plant Physiol       Date:  2011-11-17       Impact factor: 8.340

Review 9.  Established and potential physiological roles of bicarbonate-sensing soluble adenylyl cyclase (sAC) in aquatic animals.

Authors:  Martin Tresguerres; Katie L Barott; Megan E Barron; Jinae N Roa
Journal:  J Exp Biol       Date:  2014-03-01       Impact factor: 3.312

10.  Light and CO2/cAMP Signal Cross Talk on the Promoter Elements of Chloroplastic β-Carbonic Anhydrase Genes in the Marine Diatom Phaeodactylum tricornutum.

Authors:  Atsushi Tanaka; Naoki Ohno; Kensuke Nakajima; Yusuke Matsuda
Journal:  Plant Physiol       Date:  2015-12-11       Impact factor: 8.340

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