Literature DB >> 21277272

Genetic diversity of 17 Y-short tandem repeats in Indian population.

Tania Ghosh1, D Kalpana, Sanjukta Mukerjee, Meeta Mukherjee, Anil Kumar Sharma, Subhankar Nath, Varsha Rajesh Rathod, Mukesh Kumar Thakar, Ganga Nath Jha.   

Abstract

Seventeen short tandem repeats (DYS389I, DYS390, DYS389II, DYS19, DYS385a/b, DYS393, DYS391, DYS392, DYS439, DYS438, DYS456, DYS458, DYS635, Y(GATA)H4, DYS437, and DYS448) from the non-recombining region of the human Y-chromosome were analyzed in 750 unrelated males representing four major linguistic families of India using AmpFlSTR(®) Yfiler(®) PCR Amplification kit. A total of 612 distinct haplotypes were observed, of which 545 were unique. Rare alleles for the loci DYS456, DYS458, DYS635, Y(GATA)H4, and duplication at the loci DYS389I and DYS389II were also observed. To understand the genetic diversity of the Indian population, and utility of Y-STRs in forensics, the locus diversity, haplotype diversity, and discrimination capacity in all populations was determined. MDS plot based on pairwise Φ(st) and AMOVA revealed the high genetic heterogeneity among the Indian populations due to linguistic diversity and social stratification.
Copyright © 2011 Elsevier Ireland Ltd. All rights reserved.

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Year:  2011        PMID: 21277272     DOI: 10.1016/j.fsigen.2010.12.007

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  6 in total

1.  A genetic portrait of Oraon Indian tribe drawn with 15 autosomal and 17 Y chromosomal STR markers.

Authors:  Pankaj Shrivastava; Toshi Jain; V B Trivedi
Journal:  Int J Legal Med       Date:  2016-02-04       Impact factor: 2.686

2.  Polymorphisms of four pigmentation genes (SLC45A2, SLC24A5, MC1R and TYRP1) among eleven endogamous populations of India.

Authors:  Meeta Mukherjee; Sanjukta Mukerjee; Neeta Sarkar-Roy; Tania Ghosh; D Kalpana; Anil Kumar Sharma
Journal:  J Genet       Date:  2013-04       Impact factor: 1.166

3.  Y-DNA genetic evidence reveals several different ancient origins in the Brahmin population.

Authors:  David G Mahal
Journal:  Mol Genet Genomics       Date:  2020-09-25       Impact factor: 3.291

4.  Y-short tandem repeat haplotype and paternal lineage of the Ezhava population of Kerala, south India.

Authors:  Seema P Nair; Aswathy Geetha; Chippy Jagannath
Journal:  Croat Med J       Date:  2011-06       Impact factor: 1.351

5.  Assessment of Genetic Polymorphisms in the Rewa Population of Central India Using Y-Chromosomal STR Markers.

Authors:  A Mishra; U Gondhali; S Mishra; S K Choudhary
Journal:  Sovrem Tekhnologii Med       Date:  2021-12-28

6.  Genetic and Cultural Reconstruction of the Migration of an Ancient Lineage.

Authors:  Desmond D Mascarenhas; Anupuma Raina; Christopher E Aston; Dharambir K Sanghera
Journal:  Biomed Res Int       Date:  2015-09-30       Impact factor: 3.411

  6 in total

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