Literature DB >> 21273975

Microarray-based gene expression studies in ovarian cancer.

Hye Sook Chon1, Johnathan M Lancaster.   

Abstract

BACKGROUND: DNA microarray technology is a powerful genomic tool that has the potential to elucidate the relationship between clinical features of cancers and their underlying biological alterations.
METHODS: We performed a systemic search in PubMed and Medline databases for recently published articles. The search terms used included "genome-wide," "microarrays," "ovarian cancer," "prognosis, " "gene expression profiling, " "molecular marker, " and "molecular biomarker. "
RESULTS: Genome-wide expression profiling using DNA microarray technology has enhanced our understanding of the genes that influence ovarian cancer development, histopathologic subtype, progression, response to therapy, and overall survival.
CONCLUSIONS: Gene expression profiling has demonstrated its utility in ovarian cancer research. It is hoped that with technologic, statistical, and bioinformatic advances, the reliability and reproducibility of this technique will increase, spawning clinical applications that may enhance our understanding of the disease and our ability to care for patients in the future.

Entities:  

Mesh:

Year:  2011        PMID: 21273975     DOI: 10.1177/107327481101800102

Source DB:  PubMed          Journal:  Cancer Control        ISSN: 1073-2748            Impact factor:   3.302


  20 in total

1.  RNA Sequencing of Carboplatin- and Paclitaxel-Resistant Endometrial Cancer Cells Reveals New Stratification Markers and Molecular Targets for Cancer Treatment.

Authors:  Raffaele Hellweg; Ashley Mooneyham; Zenas Chang; Mihir Shetty; Edith Emmings; Yoshie Iizuka; Christopher Clark; Timothy Starr; Juan H Abrahante; Florian Schütz; Gottfried Konecny; Peter Argenta; Martina Bazzaro
Journal:  Horm Cancer       Date:  2018-06-27       Impact factor: 3.869

2.  Next-generation sequencing and microarray-based interrogation of microRNAs from formalin-fixed, paraffin-embedded tissue: preliminary assessment of cross-platform concordance.

Authors:  Andrew D Kelly; Katherine E Hill; Mick Correll; Lan Hu; Yaoyu E Wang; Renee Rubio; Shenghua Duan; John Quackenbush; Dimitrios Spentzos
Journal:  Genomics       Date:  2013-04-03       Impact factor: 5.736

3.  ZNF385B and VEGFA are strongly differentially expressed in serous ovarian carcinomas and correlate with survival.

Authors:  Bente Vilming Elgaaen; Ole Kristoffer Olstad; Leiv Sandvik; Elin Odegaard; Torill Sauer; Anne Cathrine Staff; Kaare M Gautvik
Journal:  PLoS One       Date:  2012-09-28       Impact factor: 3.240

4.  Identification of a chrXq27.3 microRNA cluster associated with early relapse in advanced stage ovarian cancer patients.

Authors:  Marina Bagnoli; Loris De Cecco; Anna Granata; Roberta Nicoletti; Edoardo Marchesi; Paola Alberti; Barbara Valeri; Massimo Libra; Mattia Barbareschi; Francesco Raspagliesi; Delia Mezzanzanica; Silvana Canevari
Journal:  Oncotarget       Date:  2011-12

5.  Transcriptional profiling of formalin fixed paraffin embedded tissue: pitfalls and recommendations for identifying biologically relevant changes.

Authors:  Matilda Rentoft; Philip John Coates; Göran Laurell; Karin Nylander
Journal:  PLoS One       Date:  2012-04-17       Impact factor: 3.240

6.  Optimizing molecular-targeted therapies in ovarian cancer: the renewed surge of interest in ovarian cancer biomarkers and cell signaling pathways.

Authors:  Donavon Hiss
Journal:  J Oncol       Date:  2012-02-06       Impact factor: 4.375

7.  An integrated analysis of the effects of microRNA and mRNA on esophageal squamous cell carcinoma.

Authors:  Yong Yang; Dianbo Li; Yang Yang; Gening Jiang
Journal:  Mol Med Rep       Date:  2015-03-27       Impact factor: 2.952

8.  High-prevalence and broad spectrum of Cell Adhesion and Extracellular Matrix gene pathway mutations in epithelial ovarian cancer.

Authors:  Arash Rafii; Najeeb M Halabi; Joel A Malek
Journal:  J Clin Bioinforma       Date:  2012-09-24

9.  StRAP: an integrated resource for profiling high-throughput cancer genomic data from stress response studies.

Authors:  Seth Johnson; Biju Issac; Shuping Zhao; Mohit Bisht; Orieta Celiku; Philip Tofilon; Kevin Camphausen; Uma Shankavaram
Journal:  PLoS One       Date:  2012-12-17       Impact factor: 3.240

Review 10.  Comparative meta-analysis of prognostic gene signatures for late-stage ovarian cancer.

Authors:  Levi Waldron; Benjamin Haibe-Kains; Aedín C Culhane; Markus Riester; Jie Ding; Xin Victoria Wang; Mahnaz Ahmadifar; Svitlana Tyekucheva; Christoph Bernau; Thomas Risch; Benjamin Frederick Ganzfried; Curtis Huttenhower; Michael Birrer; Giovanni Parmigiani
Journal:  J Natl Cancer Inst       Date:  2014-04-03       Impact factor: 11.816

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