Literature DB >> 21270730

Irving-Williams order in the framework of connectivity index ³χv enables simultaneous prediction of stability constants of bivalent transition metal complexes.

Ante Milicevic1, Gina Branica, Nenad Raos.   

Abstract

Logarithms of stability constants, log K₁ and log β₂, of the first transition series metal mono- and bis-complexes with any of four aliphatic amino acids (glycine, alanine, valine and leucine) decrease monotonously with third order valence connectivity index, ³χv, from Cu²+ to Mn²+. While stability of the complexes with the same metal is linearly dependent on ³χv, stability constants of Mn²+, Fe²+, Co²+, and Ni²+complexes with the same ligand show a quadratic dependence on ³χv. As Cu²+ complexes deviate significantly from quadratic functions, models for the simultaneous estimation of the stability constants, yielding r = 0.999 (S.E. = 0.05) and r = 0.998 (S.E. = 0.11), for log K₁ and log β₂, respectively, were developed only for Mn²+, Fe²+, Co²+, and Ni²+ complexes with amino acids.

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Year:  2011        PMID: 21270730      PMCID: PMC6259637          DOI: 10.3390/molecules16021103

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


1. Introduction

The Irving-Williams order of stability of bivalent transition metal complexes (Mn2+<Fe2+<Co2+ <Ni2+<<Cu2+>Zn2+) [1,2] is an empirical rule well known to every chemist, but it was rarely used for the quantitative prediction of stability constants. Cannon developed an interpolation formula [3] to predict stability constants of chromium(II) complexes from the constants of copper(II), manganese(II), and zinc(II), but it was later found to be in no way better than similar formulas based on one variable, namely stability constants of copper(II), or merely protonation constant of the ligand [4]. In our systematic attempt to develop regression models based on the third order valence connectivity index (3χ) for the prediction of stability constants of coordination compounds [5,6], we were concerned mostly with the copper(II) and nickel(II) chelates. We developed models not only for the complexes of the same metal, but also the simultaneous prediction of stability constants of copper(II) and nickel(II). This was done by introducing an indicator variable, i.e. assuming that the regression lines for the two metals have the same slope [7,8]. Connectivity, as well as other topological indices [9,10], have found wide range of application in all fields of chemisty [11,12,13,14], but they were not used for the prediction of stability constants of coordination compounds before the appearance of our pioneering work in 1999 [15]. Even now, many chemists are reluctant to use such a simple method, as models based on topological indices really are, to solve such a complex problem as prediction of stability of coordination compounds. However, regression models based on valence connectivity index of the third order are capable of predicting stability constants with an error usually less than 0.3 log K units, and were even successfully used for the evaluation of experimental data obtained by two different electrochemical methods, potentiometry and voltammetry [16]. The regression models were successfully checked on complexes of α-amino acids and their N-alkylated derivatives [16,17], amines [17,18,19] and smaller peptides from dipeptides to pentapeptides [7,20]. Also, we recently applied our model to cadmium(II) complexes with amino acids [21]. The aim of this paper is to make our regression models based on 3χ index more general, i.e. to develop models that would discriminate not only ligands, but metals as well. As complexes of the metals from Irving-Williams order seems ideal for this purpose, we choose stability constants of their mono- and bis-complexes with aliphatic α-amino acids (M stays for metal and B for ligand).

2. Methods

2.1. Calculation of topological indices

We calculated topological indices using a program system E-DRAGON, developed by Todeschini and coworkers [22,23], which is capable of yielding 119 topological indices in a single run, along with many other molecular descriptors [24,25]. Connectivity matrices were constructed with the aid of the Online SMILES Translator and Structure File Generator [26]. All models were developed by using 3χ index (the valence molecular connectivity index of the 3rd order), which was defined as [27,28,29]: where δ(i), δ(j), δ(k), and δ(l) are weights (valence values) of vertices (atoms) i, j, k, and l making up the path of length 3 (three consecutive chemical bonds) in a vertex-weighted molecular graph.Valence value, δ(i), of a vertex i is defined by: where Z(i) is the number of valence electrons belonging to the atom corresponding to vertex i, Z(i) is its atomic number, and H(i) is the number of hydrogen atoms attached to it. For instance, δ values for primary, secondary, tertiary and quaternary carbon atoms are 1, 2, 3, and 4, respectively; for oxygen in the OH group it equals 5, and for NH2 group δ(N) = 3. It has to be pointed out that 3χ is only a member of the family of valence connectivity indices , which differ between each other by the path length, i.e. the number of δ´ sin the summation term, Equation (3). The 3χ indices for all mono- and bis-complexes were calculated from the graph representations of the aqua complexes with two water molecules (Figure 1), assuming that metal in mono-complexes is tetracoordinated, and in bis-complexes hexacoordinated [17,30].
Figure 1

The graph representations for metal(II) mono- (MB) and bis-complex (MB2) with glycine. Heteroatoms are marked with (M), (N), and (O).

The graph representations for metal(II) mono- (MB) and bis-complex (MB2) with glycine. Heteroatoms are marked with (M), (N), and (O).

2.2. Regression calculations

Regression calculations, including the leave-one-out procedure of cross validation, cv, were done using the CROMRsel program [31]. The standard error of cross validation estimate is defined as: where ΔX and N denotes cv residuals and the number of reference points, respectively.

2.3. Stability constants selection

Because of huge variations between experimental stability constants it was important that selected constants were measured under the same conditions (ionic strength, temperature), and preferably in the same laboratory. It was a bit surprising to find out that the most consistent constants were also the oldest, determined in 1950s. They were measured at t = 25 °C, and I = 0.01 or I → 0 mol L−1. If more than one experimental value was referred for a complex, we used mean value in further calculations. Moreover, lack of constants measured at these conditions forced us to include three constants, for Fe(Glycine), Fe(Glycine)2 and Fe(Valine), measured at t = 20 °C, I = 0.01 mol L−1. Unfortunately, appropriate log K1 andlog β2 values for Ni2+ complexes with valine were not found in the literature.

3. Results and Discussion

In this paper we tried to reproduce stability constants of chelates with bivalent metals constituting Irving-Williams order, whose stability grows monotonously (from Mn2+ to Cu2+), by means of valence connectivity index of the 3rd order, 3χ. Therefore, experimental values of stability constants of the metal complexes with four aliphatic α-amino acids (glycine, alanine, valine and leucine) were taken from the literature, Table 1.
Table 1

Experimental stability constants for metal(II) chelates with α-amino acids.

Metal/Ligandlog K1log β2References
Cu/Glycine8.5715.63[32,33,34,35]
Ni/Glycine6.1511.15[32,33]
Co/Glycine5.099.10[32,33]
Fe/Glycine4.307.80[36]
Mn/Glycine3.556.63[32,33]
Cu/Alanine8.4115.21[32,33,37,38]
Ni/Alanine5.9610.66[33]
Co/Alanine4.838.55[32,33,39]
Fe/Alanine 7.30[39]
Mn/Alanine3.136.05[32,33]
Cu/Valine7.9314.45[32]
Co/Valine4.578.24[32]
Fe/Valine 6.80[39]
Mn/Valine2.845.56[32]
Cu/Leucine7.8914.34[32]
Ni/Leucine5.6210.18[40]
Co/Leucine4.528.16[32,40]
Mn/Leucine2.785.45[32]
Experimental stability constants for metal(II) chelates with α-amino acids. It is evident (Figure 2 and Figure 3), that stability constants of the complexes with the same metal decrease linearly with 3χ from glycine to leucine, as we have previously shown [17,30]. Figure 2 and Figure 3 also show that stability of mono- and bis-complexes decreases monotonously from Cu2+ to Mn2+ for complexes with the same ligand. However, the decrease is much more pronounced between Cu2+ and Ni2+ because Cu(II) is the strongest Lewis acid in Irwing-Williams order, and its complexes are therefore unusually stable [2]. Consequently, stability constants of Mn2+, Fe2+, Co2+, and Ni2+ complexes show quadratic dependence on 3χ, but Cu(II) complexes considerably deviate from it (Figure 4).
Figure 2

Experimental values of log K1 vs. connectivity 3χ index for Mn2+, Fe2+, Co2+, Ni2+, and Cu2+ complexes with glycine (G), alanine (A), valine (V) and leucine (L).

Figure 3

Experimental values of log β2 vs. connectivity 3χ index for Mn2+, Fe2+, Co2+, Ni2+, and Cu2+ complexes with glycine (G), alanine (A), valine (V) and leucine (L).

Figure 4

Quadratic dependence of log K1 of Mn2+, Fe2+, Co2+, and Ni2+ complexes with glycine (G) on connectivity index 3χ.

Experimental values of log K1 vs. connectivity 3χ index for Mn2+, Fe2+, Co2+, Ni2+, and Cu2+ complexes with glycine (G), alanine (A), valine (V) and leucine (L). Experimental values of log β2 vs. connectivity 3χ index for Mn2+, Fe2+, Co2+, Ni2+, and Cu2+ complexes with glycine (G), alanine (A), valine (V) and leucine (L). Quadratic dependence of log K1 of Mn2+, Fe2+, Co2+, and Ni2+ complexes with glycine (G) on connectivity index 3χ. Bearing this in mind we developed models for the simultaneous estimation of stability constants of Mn2+, Fe2+, Co2+ and Ni2+ complexes: where 3χ(NiB) and 3χ(NiB2), stand for normalization along x axis in the first two terms, and for normalization along y axis in the third terms. Models gave standard error of cross validation S.E.cv = 0.08 and 0.15, and maximal cv error of 0.13 and 0.29 for log K1 and log β2, respectively (Table 1, Table 2 and Table 3, Figure 5 and Figure 6).
Table 2

Regression models for the estimation of the stability constants of mono- and bis-complexes.

Eq. N DependentvariableRegression coefficientsIntercept (S.E.) r S.E.S.E.cv
a1(S.E.)a2(S.E.)a3(S.E.)
(6)12log K112.2(14)−12.10(55)−0.676(46)7.49(12)0.9990.050.08
(7)14log β 23.10(33)−7.66(36)−0.646(52)14.58(33)0.9980.110.15
Table 3

Theoretical (cross validated) stability constants for metal(II) chelates with α-amino acids, and their 3χ indices.

Metal/Ligandlog K1 (cv)log β2 (cv)3χv(MB)3χv(MB2)
Ni/Glycine6.2111.111.905.37
Co/Glycine5.189.251.995.65
Fe/Glycine4.247.652.105.97
Mn/Glycine3.516.582.246.36
Ni/Alanine5.9310.692.326.02
Co/Alanine4.798.762.426.30
Fe/Alanine 7.132.556.64
Mn/Alanine3.096.102.707.05
Ni/Valine 2.756.89
Co/Valine4.598.322.857.15
Fe/Valine 6.742.967.47
Mn/Valine2.915.643.107.85
Ni/Leucine5.5710.012.857.08
Co/Leucine4.508.162.957.35
Mn/Leucine2.815.483.208.06
Figure 5

Experimental vs. theoretical (fit) log K1 for Mn2+, Fe2+, Co2+, and Ni2+ complexes with glycine, alanine, valine and leucine; r = 0.999, S.E.cv = 0.08.

Figure 6

Experimental vs. theoretical (fit) log β2 for Mn2+, Fe2+, Co2+, and Ni2+ complexes with glycine, alanine, valine and leucine; r = 0.998, S.E.cv = 0.15.

Regression models for the estimation of the stability constants of mono- and bis-complexes. Theoretical (cross validated) stability constants for metal(II) chelates with α-amino acids, and their 3χ indices. Experimental vs. theoretical (fit) log K1 for Mn2+, Fe2+, Co2+, and Ni2+ complexes with glycine, alanine, valine and leucine; r = 0.999, S.E.cv = 0.08. Experimental vs. theoretical (fit) log β2 for Mn2+, Fe2+, Co2+, and Ni2+ complexes with glycine, alanine, valine and leucine; r = 0.998, S.E.cv = 0.15.

4. Conclusions

Our regression models, Equations (6) and (7), clearly show that by using the connectivity index 3χ it is possible to predict stability constants with an error 0.03–0.13 and 0.00–0.29 for log K1 and log β2, respectively, i.e. virtually within the limits of experimental error. Besides, maximal range of experimental values, 0.28 for log K1 of Co(Glycine) and 0.38 for log β2 of Co(Alanine)2, speaks strongly in favor of our model. All this leads to the conclusion that models for the prediction of stability constants based on connectivity index 3χ could provide a chemist the simple and efficient tool for planning his experiments and discussing his results.
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