Literature DB >> 21268710

Identification of radiation-induced expression changes in nonimmortalized human T cells.

Era L Pogosova-Agadjanyan1, Wenhong Fan, George E Georges, Jeffrey L Schwartz, Crystal M Kepler, Hana Lee, Amanda L Suchanek, Michelle R Cronk, Ariel Brumbaugh, Julia H Engel, Michi Yukawa, Lue P Zhao, Shelly Heimfeld, Derek L Stirewalt.   

Abstract

In the event of a radiation accident or attack, it will be imperative to quickly assess the amount of radiation exposure to accurately triage victims for appropriate care. RNA-based radiation dosimetry assays offer the potential to rapidly screen thousands of individuals in an efficient and cost-effective manner. However, prior to the development of these assays, it will be critical to identify those genes that will be most useful to delineate different radiation doses. Using global expression profiling, we examined expression changes in nonimmortalized T cells across a wide range of doses (0.15-12 Gy). Because many radiation responses are highly dependent on time, expression changes were examined at three different times (3, 8, and 24 h). Analyses identified 61, 512 and 1310 genes with significant linear dose-dependent expression changes at 3, 8 and 24 h, respectively. Using a stepwise regression procedure, a model was developed to estimate in vitro radiation exposures using the expression of three genes (CDKN1A, PSRC1 and TNFSF4) and validated in an independent test set with 86% accuracy. These findings suggest that RNA-based expression assays for a small subset of genes can be employed to develop clinical biodosimetry assays to be used in assessments of radiation exposure and toxicity.

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Year:  2010        PMID: 21268710      PMCID: PMC3136539          DOI: 10.1667/rr1977.1

Source DB:  PubMed          Journal:  Radiat Res        ISSN: 0033-7587            Impact factor:   2.841


  80 in total

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5.  Microarray analysis of radiation response genes in primary human fibroblasts.

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6.  Identification of differentially expressed genes in human lymphoblastoid cells exposed to irradiation and suppression of radiation-induced apoptosis with antisense oligonucleotides against caspase-4.

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10.  Gene expression signatures that predict radiation exposure in mice and humans.

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  11 in total

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3.  Gene expression as a biomarker for human radiation exposure.

Authors:  Romaica A Omaruddin; Thomas A Roland; H James Wallace; M Ahmad Chaudhry
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4.  X-ray-induced changes in the expression of inflammation-related genes in human peripheral blood.

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5.  Differences in DNA Repair Capacity, Cell Death and Transcriptional Response after Irradiation between a Radiosensitive and a Radioresistant Cell Line.

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6.  GDF-15 gene expression alterations in human lymphoblastoid cells and peripheral blood lymphocytes following exposure to ionizing radiation.

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7.  Candidate gene biodosimetry markers of exposure to external ionizing radiation in human blood: A systematic review.

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8.  Screening of Long Noncoding RNAs Induced by Radiation Using Microarray.

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10.  Transcriptomic responses in mouse blood during the first week after in vivo gamma irradiation.

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