Literature DB >> 21257687

Sunxiuqinia elliptica gen. nov., sp. nov., a member of the phylum Bacteroidetes isolated from sediment in a sea cucumber farm.

Lingyun Qu1, Fengling Zhu1, Xuguang Hong1, Wei Gao1, Junhui Chen1, Xiuqin Sun1.   

Abstract

Three novel aerobic, elliptic bacteria, designated DQHS4(T), DQHS8 and DQHS15, were isolated from sediment of a seashore pond for sea cucumber culture in Jimo, Qingdao, on the east coast of China. Cells were Gram-, oxidase- and catalase-negative. All three strains grew at 15-42 °C, pH 5-9 and NaCl concentrations between 0.5 and 10%. DNA-DNA hybridization experiments revealed high (>85%) relatedness among the three novel isolates and suggested that the strains constitute a single species. Comparative 16S rRNA gene sequence analysis indicated that these bacteria had less than 90% similarity to all described species of the phylum Bacteroidetes; the closest relative of the three isolates was Prolixibacter bellariivorans F2(T), sharing only 89.6% sequence similarity. The major cellular fatty acids were iso-C(17:0) 3-OH (19.8-20.0%), iso-C(15:0) (16.9-17.3%), anteiso-C(17:1) B and/or iso-C(17:1) I (7.4-8.7%), C(17:0) 2-OH (8.4%), anteiso-C(15:0) (8.2-8.6%) and C(17:1)ω6c (5.6-6.0%). The major respiratory quinone was menaquinone-7 (MK-7) and the DNA G+C content was 41.8-43.5 mol%. Based on the distinct phylogenetic position and the combination of genotypic, phenotypic and chemotaxonomic characteristics, these three strains were considered to represent a novel species of a new genus in the phylum Bacteroidetes, for which the name Sunxiuqinia elliptica gen. nov., sp. nov. is proposed. The type strain of Sunxiuqinia elliptica is DQHS4(T) (=CGMCC 1.9156(T) =NCCB 100301(T) =LMG 25367(T)).

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Year:  2011        PMID: 21257687     DOI: 10.1099/ijs.0.026971-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

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Authors:  Jun Dong; Jinqiu Yu; Qiburi Bao
Journal:  Environ Sci Pollut Res Int       Date:  2018-10-10       Impact factor: 4.223

2.  Analysis of 1,000 Type-Strain Genomes Improves Taxonomic Classification of Bacteroidetes.

Authors:  Marina García-López; Jan P Meier-Kolthoff; Brian J Tindall; Sabine Gronow; Tanja Woyke; Nikos C Kyrpides; Richard L Hahnke; Markus Göker
Journal:  Front Microbiol       Date:  2019-09-23       Impact factor: 5.640

3.  Sunxiuqinia dokdonensis sp. nov., isolated from deep sub-seafloor sediment.

Authors:  Dong-Ho Chang; Jae-Bong Lee; Geun-Hye Lee; Moon-Soo Rhee; Haewon Lee; Kyung Sook Bae; Doo-Sang Park; Byoung-Chan Kim
Journal:  J Microbiol       Date:  2013-12-19       Impact factor: 3.422

4.  Whole-genome sequence of Sunxiuqinia dokdonensis DH1(T), isolated from deep sub-seafloor sediment in Dokdo Island.

Authors:  Sooyeon Lim; Dong-Ho Chang; Byoung-Chan Kim
Journal:  Genom Data       Date:  2016-07-02

5.  Microbial Community Changes in a Chlorinated Solvents Polluted Aquifer Over the Field Scale Treatment With Poly-3-Hydroxybutyrate as Amendment.

Authors:  Bruna Matturro; Lucia Pierro; Emanuela Frascadore; Marco Petrangeli Papini; Simona Rossetti
Journal:  Front Microbiol       Date:  2018-07-24       Impact factor: 5.640

  5 in total

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