Literature DB >> 21255071

Acidipila rosea gen. nov., sp. nov., an acidophilic chemoorganotrophic bacterium belonging to the phylum Acidobacteria.

Keiko Okamura1, Akiko Kawai, Takeshi Yamada, Akira Hiraishi.   

Abstract

Two strains of aerobic acidophilic chemoorganotrophic bacteria designed strains AP8(T) and AP9 were isolated from acid mine drainage and acidic soil, respectively. These isolates were gram-negative, nonmotile cocci and coccobacilli measuring 0.5-0.8 μm in diameter. Cells were capsulated. Colonies on solid media were pink colored. The pH range for growth was 3.0-6.0 (optimum pH 4.5). Sugars, gluconate, and some amino acids were good carbon and energy sources for growth. The main components of cellular fatty acids were C(15:0) iso and C(16:1) ω7c. Menaquinone-8 was the major quinone. The G+C content of genomic DNA was 59.5%. Both strains had identical sequences of 16S rRNA genes that were most closely related to that of the type strain of Acidobacterium capsulatum (96% similarity). There were major differences between the isolates and A. capsulatum in cell morphology, carbon nutrition, and fatty acid profiles. Based on these phylogenetic and phenotypic data, we propose the name Acidipila rosea gen. nov., sp. nov. to accommodate the novel isolates. The type strain is AP8(T) (NBRC 107607(T), KCTC 23427(T)).
© 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

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Year:  2011        PMID: 21255071     DOI: 10.1111/j.1574-6968.2011.02224.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  14 in total

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Authors:  Jaap S Sinninghe Damsté; W Irene C Rijpstra; Ellen C Hopmans; Bärbel U Foesel; Pia K Wüst; Jörg Overmann; Marcus Tank; Donald A Bryant; Peter F Dunfield; Karen Houghton; Matthew B Stott
Journal:  Appl Environ Microbiol       Date:  2014-06-13       Impact factor: 4.792

2.  Acidicapsa ferrireducens sp. nov., Acidicapsa acidiphila sp. nov., and Granulicella acidiphila sp. nov.: novel acidobacteria isolated from metal-rich acidic waters.

Authors:  Carmen Falagán; Bärbel Foesel; Barrie Johnson
Journal:  Extremophiles       Date:  2017-02-22       Impact factor: 2.395

3.  Terracidiphilus gabretensis gen. nov., sp. nov., an Abundant and Active Forest Soil Acidobacterium Important in Organic Matter Transformation.

Authors:  Paula García-Fraile; Oldrich Benada; Tomáš Cajthaml; Petr Baldrian; Salvador Lladó
Journal:  Appl Environ Microbiol       Date:  2015-11-06       Impact factor: 4.792

4.  Biological consequences of ancient gene acquisition and duplication in the large genome of Candidatus Solibacter usitatus Ellin6076.

Authors:  Jean F Challacombe; Stephanie A Eichorst; Loren Hauser; Miriam Land; Gary Xie; Cheryl R Kuske
Journal:  PLoS One       Date:  2011-09-15       Impact factor: 3.240

5.  A robust PCR primer design platform applied to the detection of Acidobacteria Group 1 in soil.

Authors:  Jason D Gans; John Dunbar; Stephanie A Eichorst; La Verne Gallegos-Graves; Murray Wolinsky; Cheryl R Kuske
Journal:  Nucleic Acids Res       Date:  2012-03-20       Impact factor: 16.971

6.  Complete genome sequence of Granulicella mallensis type strain MP5ACTX8(T), an acidobacterium from tundra soil.

Authors:  Suman R Rawat; Minna K Männistö; Valentin Starovoytov; Lynne Goodwin; Matt Nolan; Loren J Hauser; Miriam Land; Karen Walston Davenport; Tanja Woyke; Max M Häggblom
Journal:  Stand Genomic Sci       Date:  2013-09-30

7.  Soil Acidobacterial 16S rRNA Gene Sequences Reveal Subgroup Level Differences between Savanna-Like Cerrado and Atlantic Forest Brazilian Biomes.

Authors:  Elisa C P Catão; Fabyano A C Lopes; Janaína F Araújo; Alinne P de Castro; Cristine C Barreto; Mercedes M C Bustamante; Betania F Quirino; Ricardo H Krüger
Journal:  Int J Microbiol       Date:  2014-09-15

Review 8.  The Ecology of Acidobacteria: Moving beyond Genes and Genomes.

Authors:  Anna M Kielak; Cristine C Barreto; George A Kowalchuk; Johannes A van Veen; Eiko E Kuramae
Journal:  Front Microbiol       Date:  2016-05-31       Impact factor: 5.640

9.  Cultivated bacterial diversity associated with the carnivorous plant Utricularia breviscapa (Lentibulariaceae) from floodplains in Brazil.

Authors:  Felipe Rezende Lima; Almir José Ferreira; Cristine Gobbo Menezes; Vitor Fernandes Oliveira Miranda; Manuella Nóbrega Dourado; Welington Luiz Araújo
Journal:  Braz J Microbiol       Date:  2018-03-31       Impact factor: 2.476

10.  Complete genome sequence of Granulicella tundricola type strain MP5ACTX9(T), an Acidobacteria from tundra soil.

Authors:  Suman R Rawat; Minna K Männistö; Valentin Starovoytov; Lynne Goodwin; Matt Nolan; Loren Hauser; Miriam Land; Karen Walston Davenport; Tanja Woyke; Max M Häggblom
Journal:  Stand Genomic Sci       Date:  2013-12-05
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