Literature DB >> 21240367

Anticoagulant effects of thioanalogs of thrombin-binding DNA-aptamer and their stability in the plasma.

G E Pozmogova1, M A Zaitseva, I P Smirnov, A G Shvachko, M A Murina, V I Sergeenko.   

Abstract

In order to create effective therapeutically significant oligonucleotide structures, a series of analogs of thrombin-binding aptamer d(GGTTGGTGTGGTTGG) containing thiophosphoryl substitutions were synthesized. The anticoagulation effects of the resultant thrombin-binding aptamer analogs were evaluated and the effects of local thiomodifications on their structure and function were studied, including the effects on stability in blood plasma and resistance to DNA nucleases. A promising modified oligonucleotide (LL11) was found with the structure modified only in TT loops. It retains antithrombin properties of thrombin-binding aptamer, but is more resistant to biodegradation.

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Year:  2010        PMID: 21240367     DOI: 10.1007/s10517-010-1099-5

Source DB:  PubMed          Journal:  Bull Exp Biol Med        ISSN: 0007-4888            Impact factor:   0.804


  7 in total

1.  Polyanionic Carboxyethyl Peptide Nucleic Acids (ce-PNAs): Synthesis and DNA Binding.

Authors:  Yuliya Kirillova; Nataliya Boyarskaya; Andrey Dezhenkov; Mariya Tankevich; Ivan Prokhorov; Anna Varizhuk; Sergei Eremin; Dmitry Esipov; Igor Smirnov; Galina Pozmogova
Journal:  PLoS One       Date:  2015-10-15       Impact factor: 3.240

2.  Impact of the Position of the Chemically Modified 5-Furyl-2'-Deoxyuridine Nucleoside on the Thrombin DNA Aptamer-Protein Complex: Structural Insights into Aptamer Response from MD Simulations.

Authors:  Preethi Seelam Prabhakar; Richard A Manderville; Stacey D Wetmore
Journal:  Molecules       Date:  2019-08-10       Impact factor: 4.411

3.  Comparison of the 'chemical' and 'structural' approaches to the optimization of the thrombin-binding aptamer.

Authors:  Olga Tatarinova; Vladimir Tsvetkov; Dmitry Basmanov; Nikolay Barinov; Igor Smirnov; Edward Timofeev; Dmitry Kaluzhny; Andrey Chuvilin; Dmitry Klinov; Anna Varizhuk; Galina Pozmogova
Journal:  PLoS One       Date:  2014-02-20       Impact factor: 3.240

Review 4.  Molecular Selection, Modification and Development of Therapeutic Oligonucleotide Aptamers.

Authors:  Yuanyuan Yu; Chao Liang; Quanxia Lv; Defang Li; Xuegong Xu; Baoqin Liu; Aiping Lu; Ge Zhang
Journal:  Int J Mol Sci       Date:  2016-03-11       Impact factor: 5.923

Review 5.  Chemical Modifications of Nucleic Acid Aptamers for Therapeutic Purposes.

Authors:  Shuaijian Ni; Houzong Yao; Lili Wang; Jun Lu; Feng Jiang; Aiping Lu; Ge Zhang
Journal:  Int J Mol Sci       Date:  2017-08-02       Impact factor: 5.923

Review 6.  Aptamers Chemistry: Chemical Modifications and Conjugation Strategies.

Authors:  Fadwa Odeh; Hamdi Nsairat; Walhan Alshaer; Mohammad A Ismail; Ezaldeen Esawi; Baraa Qaqish; Abeer Al Bawab; Said I Ismail
Journal:  Molecules       Date:  2019-12-18       Impact factor: 4.411

Review 7.  Aptamer Applications in Neuroscience.

Authors:  Meric Ozturk; Marit Nilsen-Hamilton; Muslum Ilgu
Journal:  Pharmaceuticals (Basel)       Date:  2021-12-03
  7 in total

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