Literature DB >> 21238221

Phylogenetic supertrees: Assembling the trees of life.

M J Sanderson1, A Purvis, C Henze.   

Abstract

Systematists and comparative biologists commonly want to make statements about relationships among taxa that have never been collectively included in any single phylogenetic analysis. Construction of phylogenetic 'supertrees' provides one solution. Supertrees are estimates of phylogeny assembled from sets of smaller estimates (source trees) sharing some but not necessarily all their taxa in common. If certain conditions are met, supertrees can retain all or most of the information from the source trees and also make novel statements about relationships of taxa that do not co-occur on any one source tree. Supertrees have commonly been constructed using subjective and informal approaches, but several explicit approaches have recently been proposed.

Year:  1998        PMID: 21238221     DOI: 10.1016/S0169-5347(97)01242-1

Source DB:  PubMed          Journal:  Trends Ecol Evol        ISSN: 0169-5347            Impact factor:   17.712


  45 in total

1.  Hotspots and the conservation of evolutionary history.

Authors:  Wes Sechrest; Thomas M Brooks; Gustavo A B da Fonseca; William R Konstant; Russell A Mittermeier; Andy Purvis; Anthony B Rylands; John L Gittleman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

2.  The evolution of parental care and egg size: a comparative analysis in frogs.

Authors:  Kyle Summers; Christian Sea McKeon; Heather Heying
Journal:  Proc Biol Sci       Date:  2006-03-22       Impact factor: 5.349

3.  Ecology and evolution of mammalian biodiversity.

Authors:  Kate E Jones; Kamran Safi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-09-12       Impact factor: 6.237

4.  An application of supertree methods to Mammalian mitogenomic sequences.

Authors:  Véronique Campbell; François-Joseph Lapointe
Journal:  Evol Bioinform Online       Date:  2010-05-12       Impact factor: 1.625

5.  The supertree tool kit.

Authors:  Katie E Davis; Jon Hill
Journal:  BMC Res Notes       Date:  2010-04-08

6.  Mating system drives negative associations between morphological features in Schistosomatidae.

Authors:  Sophie Beltran; Yves Desdevises; Julien Portela; Jérôme Boissier
Journal:  BMC Evol Biol       Date:  2010-08-10       Impact factor: 3.260

7.  Maximum gene-support tree.

Authors:  Yunfeng Shan; Xiu-Qing Li
Journal:  Evol Bioinform Online       Date:  2008-05-15       Impact factor: 1.625

8.  Efficient tree searches with available algorithms.

Authors:  Gonzalo Giribet
Journal:  Evol Bioinform Online       Date:  2007-11-12       Impact factor: 1.625

9.  A new effective method for estimating missing values in the sequence data prior to phylogenetic analysis.

Authors:  Abdoulaye Baniré Diallo; François-Joseph Lapointe; Vladimir Makarenkov
Journal:  Evol Bioinform Online       Date:  2007-02-01       Impact factor: 1.625

10.  A simulation study comparing supertree and combined analysis methods using SMIDGen.

Authors:  M Shel Swenson; François Barbançon; Tandy Warnow; C Randal Linder
Journal:  Algorithms Mol Biol       Date:  2010-01-04       Impact factor: 1.405

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