Literature DB >> 21232509

SINEs: Short interspersed repeated elements of the eukaryotic genome.

N Okada1.   

Abstract

Much of the eukaryotic genome is composed of a variety of repetitive sequences. Amongst these, there are two kinds of retroposons (sequence elements derived from nonviral cellular RNA): SINEs (short interspersed elements) and LINEs (long interspersed elements). Amplification of SINEs occurs in a single germ cell, and the members of SINEs spread and become fixed in populations through genetic drift. SINEs can be regarded as phylogenetic landmarks: they are specific to one species, a few species, a genus or in some cases a family, indicating a specific time of amplification during evolution. Recent studies concerning the structure and origin of many SINEs revealed that retroposons are more widespread in animal genomes than was previously thought.
Copyright © 1991. Published by Elsevier Ltd.

Entities:  

Year:  1991        PMID: 21232509     DOI: 10.1016/0169-5347(91)90226-N

Source DB:  PubMed          Journal:  Trends Ecol Evol        ISSN: 0169-5347            Impact factor:   17.712


  40 in total

Review 1.  SINEs of the perfect character.

Authors:  D M Hillis
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

2.  Phylogenetic relationships among cetartiodactyls based on insertions of short and long interpersed elements: hippopotamuses are the closest extant relatives of whales.

Authors:  M Nikaido; A P Rooney; N Okada
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-31       Impact factor: 11.205

3.  Phylogenetic relationships among East African haplochromine fish as revealed by short interspersed elements (SINEs).

Authors:  Yohey Terai; Naoko Takezaki; Werner E Mayer; Herbert Tichy; Naoyuki Takahata; Jan Klein; Norihiro Okada
Journal:  J Mol Evol       Date:  2004-01       Impact factor: 2.395

Review 4.  Genome canalization: the coevolution of transposable and interspersed repetitive elements with single copy DNA.

Authors:  R M von Sternberg; G E Novick; G P Gao; R J Herrera
Journal:  Genetica       Date:  1992       Impact factor: 1.082

5.  Evolutionary implications of multiple SINE insertions in an intronic region from diverse mammals.

Authors:  Li Yu; Ya-Ping Zhang
Journal:  Mamm Genome       Date:  2005-10-14       Impact factor: 2.957

6.  A tandemly repeated DNA family originated from SINE-related elements in the European plethodontid salamanders (Amphibia, Urodela).

Authors:  R Batistoni; G Pesole; S Marracci; I Nardi
Journal:  J Mol Evol       Date:  1995-06       Impact factor: 2.395

7.  Characterization of species-specifically amplified SINEs in three salmonid species--chum salmon, pink salmon, and kokanee: the local environment of the genome may be important for the generation of a dominant source gene at a newly retroposed locus.

Authors:  N Takasaki; L Park; M Kaeriyama; A J Gharrett; N Okada
Journal:  J Mol Evol       Date:  1996-02       Impact factor: 2.395

Review 8.  The role of constrained self-organization in genome structural evolution.

Authors:  R von Sternberg
Journal:  Acta Biotheor       Date:  1996-06       Impact factor: 1.774

9.  Talua SINE biology in the genome of the Reticulitermes subterranean termites (Isoptera, Rhinotermitidae).

Authors:  Andrea Luchetti; Barbara Mantovani
Journal:  J Mol Evol       Date:  2009-11-11       Impact factor: 2.395

10.  Primate jumping genes elucidate strepsirrhine phylogeny.

Authors:  Christian Roos; Jürgen Schmitz; Hans Zischler
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-12       Impact factor: 11.205

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