Literature DB >> 21231929

Identification of an AluY-mediated deletion of exon 5 in the CPOX gene by MLPA analysis in patients with hereditary coproporphyria.

M Barbaro1, M Kotajärvi, P Harper, Y Floderus.   

Abstract

Hereditary coproporphyria (HCP) is an autosomal dominantly inherited hepatic porphyria, caused by a mutation in the coproporphyrinogen oxidase (CPOX) gene. The genetic defect leads to a partial defect of CPOX, the sixth enzyme involved in haem biosynthesis. Affected individuals can develop acute life-threatening attacks of neurovisceral symptoms and/or more rarely cutaneous symptoms such as skin fragility and blistering. The identification of the genetic defect in HCP families is of crucial importance to detect the carrier status which allows counselling to prevent possible triggering factors, e.g. certain drugs, alcohol, or fasting. In a total of nine Swedish HCP families, routine gene sequence analysis had identified a causative mutation in only five. In the present study, using an in-house developed synthetic probe set for multiplex ligation-dependent probe amplification (MLPA) analysis, we detected a deletion of the fifth exon in the CPOX gene in the remaining four families. The deletion is 3381 bp in size and has originated by an Alu-mediated mechanism. This finding emphasizes the usefulness of MLPA analysis as a complement to gene sequencing for comprehensive genetic diagnostics in HCP patients.
© 2011 John Wiley & Sons A/S.

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Year:  2011        PMID: 21231929     DOI: 10.1111/j.1399-0004.2011.01628.x

Source DB:  PubMed          Journal:  Clin Genet        ISSN: 0009-9163            Impact factor:   4.438


  4 in total

Review 1.  Porphyria Diagnostics-Part 1: A Brief Overview of the Porphyrias.

Authors:  Vaithamanithi-Mudumbai Sadagopa Ramanujam; Karl Elmo Anderson
Journal:  Curr Protoc Hum Genet       Date:  2015-07-01

2.  Detection of exon skipping events in BRCA1 RNA using MLPA kit P002.

Authors:  Rita D Brandão; Demis Tserpelis; Encarna Gómez García; Marinus J Blok
Journal:  Mol Biol Rep       Date:  2012-02-17       Impact factor: 2.316

3.  An Alu insertion map of the Indian population: identification and analysis in 1021 genomes of the IndiGen project.

Authors:  P Prakrithi; Khushboo Singhal; Disha Sharma; Abhinav Jain; Rahul C Bhoyar; Mohamed Imran; Vigneshwar Senthilvel; Mohit Kumar Divakar; Anushree Mishra; Vinod Scaria; Sridhar Sivasubbu; Mitali Mukerji
Journal:  NAR Genom Bioinform       Date:  2022-02-15

4.  Partial protoporphyrinogen oxidase (PPOX) gene deletions, due to different Alu-mediated mechanisms, identified by MLPA analysis in patients with variegate porphyria.

Authors:  Michela Barbaro; Maire Kotajärvi; Pauline Harper; Ylva Floderus
Journal:  Orphanet J Rare Dis       Date:  2013-01-16       Impact factor: 4.123

  4 in total

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