Literature DB >> 21231087

Networks of motifs from sequences of symbols.

Roberta Sinatra1, Daniele Condorelli, Vito Latora.   

Abstract

We introduce a method to convert an ensemble of sequences of symbols into a weighted directed network whose nodes are motifs, while the directed links and their weights are defined from statistically significant co-occurences of two motifs in the same sequence. The analysis of communities of networks of motifs is shown to be able to correlate sequences with functions in the human proteome database, to detect hot topics from online social dialogs, to characterize trajectories of dynamical systems, and it might find other useful applications to process large amounts of data in various fields.

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Year:  2010        PMID: 21231087     DOI: 10.1103/PhysRevLett.105.178702

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  5 in total

1.  A novel symbolization scheme for multichannel recordings with emphasis on phase information and its application to differentiate EEG activity from different mental tasks.

Authors:  Stavros I Dimitriadis; Nikolaos A Laskaris; Vasso Tsirka; Sofia Erimaki; Michael Vourkas; Sifis Micheloyannis; Spiros Fotopoulos
Journal:  Cogn Neurodyn       Date:  2011-12-06       Impact factor: 5.082

2.  Understanding mobility in a social petri dish.

Authors:  Michael Szell; Roberta Sinatra; Giovanni Petri; Stefan Thurner; Vito Latora
Journal:  Sci Rep       Date:  2012-06-14       Impact factor: 4.379

3.  Wikipedia information flow analysis reveals the scale-free architecture of the semantic space.

Authors:  Adolfo Paolo Masucci; Alkiviadis Kalampokis; Victor Martínez Eguíluz; Emilio Hernández-García
Journal:  PLoS One       Date:  2011-02-28       Impact factor: 3.240

4.  Emergence of good conduct, scaling and zipf laws in human behavioral sequences in an online world.

Authors:  Stefan Thurner; Michael Szell; Roberta Sinatra
Journal:  PLoS One       Date:  2012-01-12       Impact factor: 3.240

5.  Markovian language model of the DNA and its information content.

Authors:  S Srivastava; M S Baptista
Journal:  R Soc Open Sci       Date:  2016-01-06       Impact factor: 2.963

  5 in total

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