Literature DB >> 21230660

Reaction-subdiffusion model of morphogen gradient formation.

S B Yuste1, E Abad, Katja Lindenberg.   

Abstract

We study gradient formation of subdiffusive morphogens. The morphogens are produced at a source point at a constant rate. From there they move subdiffusively and are also subject to degradation at a rate that may depend on location and on time. Our analysis is based on a reaction-subdiffusion equation obtained from a continuous time random-walk model with a long-tailed waiting time distribution that also incorporates an evanescence process. Spatially uniform degradation at a constant rate leads to an exponentially decreasing stationary concentration profile hardly distinguishable from that obtained with normal diffusion. On the other hand, with location-dependent degradation we find a rich gamut of profiles, some qualitatively quite different from those occurring with normal diffusion. We conclude that long-time morphogen concentration profiles are very sensitive to the spatial dependence of the reactivity and may also serve as a sensitive measure of the occurrence of anomalous diffusion.

Mesh:

Year:  2010        PMID: 21230660     DOI: 10.1103/PhysRevE.82.061123

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  6 in total

1.  Kinetics of receptor occupancy during morphogen gradient formation.

Authors:  Alexander M Berezhkovskii; Stanislav Y Shvartsman
Journal:  J Chem Phys       Date:  2013-06-28       Impact factor: 3.488

2.  Anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium.

Authors:  Hédi Soula; Bertrand Caré; Guillaume Beslon; Hugues Berry
Journal:  Biophys J       Date:  2013-11-05       Impact factor: 4.033

3.  Moving boundary problems governed by anomalous diffusion.

Authors:  Christopher J Vogl; Michael J Miksis; Stephen H Davis
Journal:  Proc Math Phys Eng Sci       Date:  2012-06-20       Impact factor: 2.704

4.  Reply to the comment by V. P. Shkilev on "anomalous versus slowed-down Brownian diffusion in the ligand-binding equilibrium".

Authors:  Hédi Soula; Bertrand Caré; Guillaume Beslon; Hugues Berry
Journal:  Biophys J       Date:  2014-06-03       Impact factor: 4.033

5.  Time Fractional Fisher-KPP and Fitzhugh-Nagumo Equations.

Authors:  Christopher N Angstmann; Bruce I Henry
Journal:  Entropy (Basel)       Date:  2020-09-16       Impact factor: 2.524

6.  Computational modeling reveals optimal strategy for kinase transport by microtubules to nerve terminals.

Authors:  Yen Ling Koon; Cheng Gee Koh; Keng-Hwee Chiam
Journal:  PLoS One       Date:  2014-04-01       Impact factor: 3.240

  6 in total

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