Literature DB >> 21230500

Queueing induced by bidirectional motor motion near the end of a microtubule.

Peter Ashwin1, Congping Lin, Gero Steinberg.   

Abstract

Recent live observations of motors in long-range microtubule (MT) dependent transport in the fungus Ustilago maydis have reported bidirectional motion of dynein and an accumulation of the motors at the polymerization-active (the plus-end) of the microtubule. Quantitative data derived from in vivo observation of dynein has enabled us to develop an accurate, quantitatively-valid asymmetric simple exclusion process (ASEP) model that describes the coordinated motion of anterograde and retrograde motors sharing a single oriented microtubule. We give approximate expressions for the size and distribution of the accumulation, and discuss queueing properties for motors entering this accumulation. We show for this ASEP model, that the mean accumulation can be modeled as an M/M/∞ queue that is Poisson distributed with mean F(arr)/p(d), where F(arr) is the flux of motors that arrives at the tip and p(d) is the rate at which individual motors change direction from anterograde to retrograde motion. Deviations from this can in principle be used to gain information about other processes at work in the accumulation. Furthermore, our work is a significant step toward a mathematical description of the complex interactions of motors in cellular long-range transport of organelles.

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Year:  2010        PMID: 21230500     DOI: 10.1103/PhysRevE.82.051907

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  6 in total

1.  Motor Protein Accumulation on Antiparallel Microtubule Overlaps.

Authors:  Hui-Shun Kuan; Meredith D Betterton
Journal:  Biophys J       Date:  2016-05-10       Impact factor: 4.033

2.  Controlled and stochastic retention concentrates dynein at microtubule ends to keep endosomes on track.

Authors:  Martin Schuster; Sreedhar Kilaru; Peter Ashwin; Congping Lin; Nicholas J Severs; Gero Steinberg
Journal:  EMBO J       Date:  2011-01-28       Impact factor: 11.598

3.  Phase-plane analysis of the totally asymmetric simple exclusion process with binding kinetics and switching between antiparallel lanes.

Authors:  Hui-Shun Kuan; Meredith D Betterton
Journal:  Phys Rev E       Date:  2016-08-29       Impact factor: 2.529

Review 4.  Spatial organization of organelles in fungi: Insights from mathematical modelling.

Authors:  Congping Lin; Gero Steinberg
Journal:  Fungal Genet Biol       Date:  2017-03-25       Impact factor: 3.495

5.  Mathematical model with spatially uniform regulation explains long-range bidirectional transport of early endosomes in fungal hyphae.

Authors:  Jia Gou; Leah Edelstein-Keshet; Jun Allard
Journal:  Mol Biol Cell       Date:  2014-06-18       Impact factor: 4.138

6.  A mathematical understanding of how cytoplasmic dynein walks on microtubules.

Authors:  L Trott; M Hafezparast; A Madzvamuse
Journal:  R Soc Open Sci       Date:  2018-08-08       Impact factor: 2.963

  6 in total

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