Literature DB >> 21230328

Exact equilibrium-state solution of an intracellular complex formation model: kA↔P reaction in a small volume.

Zoran Konkoli1.   

Abstract

A generic model of complex formation in small volumes was studied under the assumption of perfect mixing. Particles A react in clusters, and each reaction converts k A particles into a P particle. The back reaction is also allowed. The equilibrium state of the model is solved exactly. Fluctuations in product particle number are reduced by increasing the degree of cooperativity k. Three qualitatively distinct reactant fluctuation characteristics emerge.

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Year:  2010        PMID: 21230328     DOI: 10.1103/PhysRevE.82.041922

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  4 in total

1.  A danger of low copy numbers for inferring incorrect cooperativity degree.

Authors:  Zoran Konkoli
Journal:  Theor Biol Med Model       Date:  2010-11-01       Impact factor: 2.432

2.  Safe uses of Hill's model: an exact comparison with the Adair-Klotz model.

Authors:  Zoran Konkoli
Journal:  Theor Biol Med Model       Date:  2011-04-26       Impact factor: 2.432

3.  Barriers to transmission of transcriptional noise in a c-fos c-jun pathway.

Authors:  Khyati Shah; Sanjay Tyagi
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

4.  The circadian oscillator analysed at the single-transcript level.

Authors:  Nicholas E Phillips; Alice Hugues; Jake Yeung; Eric Durandau; Damien Nicolas; Felix Naef
Journal:  Mol Syst Biol       Date:  2021-03       Impact factor: 11.429

  4 in total

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