Literature DB >> 21229996

Theoretical study of formamide decomposition pathways.

Vinh Son Nguyen1, Heather L Abbott, M Michele Dawley, Thomas M Orlando, Jerzy Leszczynski, Minh Tho Nguyen.   

Abstract

The chemical transformations of formamide (NH(2)CHO), a molecule of prebiotic interest as a precursor for biomolecules, are investigated using methods of electronic structure computations and Rice-Rampserger-Kassel-Marcus (RRKM) theory. Specifically, quantum chemical calculations applying the coupled-cluster theory CCSD(T), whose energies are extrapolated to the complete basis set limit (CBS), are carried out to construct the [CH(3)NO] potential energy surface. RRKM theory is then used to systematically examine decomposition channels leading to the formation of small molecules including CO, NH(3), H(2)O, HCN, HNC, H(2), HNCO, and HOCN. The energy barriers for the decarboxylation, dehydrogenation, and dehydration processes are found to be in the range of 73-78 kcal/mol. H(2) loss is predicted to be a one-step process although a two-step process is competitive. CO elimination is found to prefer a two-step pathway involving the carbene isomer NH(2)CHO (aminohydroxymethylene) as an intermediate. This CO-elimination channel is also favored over the one-step H(2) loss, in agreement with experiment. The H(2)O loss is a multistep process passing through a formimic acid conformer, which subsequently undergoes a rate-limiting dehydration. The dehydration appears to be particularly favored in the low-temperature regime. The new feature identifies aminohydroxymethylene as a transient but crucial intermediate in the decarboxylation of formamide.

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Year:  2011        PMID: 21229996     DOI: 10.1021/jp109143j

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  7 in total

1.  Meteorite-catalyzed syntheses of nucleosides and of other prebiotic compounds from formamide under proton irradiation.

Authors:  Raffaele Saladino; Eleonora Carota; Giorgia Botta; Mikhail Kapralov; Gennady N Timoshenko; Alexei Y Rozanov; Eugene Krasavin; Ernesto Di Mauro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-13       Impact factor: 11.205

2.  Theoretical study of formamide decomposition pathways over (6,0) silicon-carbide nanotube.

Authors:  Mehdi D Esrafili; Mozhgan Ghanbari; Roghaye Nurazar; Parisa Nematollahi
Journal:  J Mol Model       Date:  2015-03-19       Impact factor: 1.810

3.  Formation of nucleobases in a Miller-Urey reducing atmosphere.

Authors:  Martin Ferus; Fabio Pietrucci; Antonino Marco Saitta; Antonín Knížek; Petr Kubelík; Ondřej Ivanek; Violetta Shestivska; Svatopluk Civiš
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-10       Impact factor: 11.205

4.  Formamide reaction network in gas phase and solution via a unified theoretical approach: Toward a reconciliation of different prebiotic scenarios.

Authors:  Fabio Pietrucci; Antonino Marco Saitta
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-23       Impact factor: 11.205

5.  Activation Energy Calculations for Formamide-TiO2 and Formamide-Pt Interactions in the Presence of Water.

Authors:  E Dushanov; Kh Kholmurodov; K Yasuoka
Journal:  Open Biochem J       Date:  2013-03-22

6.  Monitoring the Reactivity of Formamide on Amorphous SiO2 by In-Situ UV-Raman Spectroscopy and DFT Modeling.

Authors:  Matteo Signorile; Stefano Pantaleone; Nadia Balucani; Francesca Bonino; Gianmario Martra; Piero Ugliengo
Journal:  Molecules       Date:  2020-05-12       Impact factor: 4.411

7.  Electron ionization of clusters containing the formamide molecule.

Authors:  Harvey-Andres Suarez-Moreno; Lauren Eckermann; Fabio Zappa; Eugene Arthur-Baidoo; Sylwia Ptasińska; Stephan Denifl
Journal:  Eur Phys J D At Mol Opt Phys       Date:  2021-10-20       Impact factor: 1.425

  7 in total

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