Literature DB >> 21227759

DNA end resection--unraveling the tail.

Eleni P Mimitou1, Lorraine S Symington.   

Abstract

Homology-dependent repair of DNA double-strand breaks (DSBs) initiates by the 5'-3' resection of the DNA ends to create single-stranded DNA (ssDNA), the substrate for Rad51/RecA binding. Long tracts of ssDNA are also required for activation of the ATR-mediated checkpoint response. Thus, identifying the proteins required and the underlying mechanism for DNA end resection has been an intense area of investigation. Genetic studies in Saccharomyces cerevisiae show that end resection takes place in two steps. Initially, a short oligonucleotide tract is removed from the 5' strand to create an early intermediate with a short 3' overhang. Then in a second step the early intermediate is rapidly processed generating an extensive tract of ssDNA. The first step is dependent on the highly conserved Mre11-Rad50-Xrs2 complex and Sae2, while the second step employs the exonuclease Exo1 and/or the helicase-topoisomerase complex Sgs1-Top3-Rmi1 with the endonuclease Dna2. Here we review recent in vitro and in vivo findings that shed more light into the mechanisms of DSB processing in mitotic and meiotic DSB repair as well as in telomere metabolism.
Copyright © 2010 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21227759      PMCID: PMC3046306          DOI: 10.1016/j.dnarep.2010.12.004

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  47 in total

1.  Endonucleolytic processing of covalent protein-linked DNA double-strand breaks.

Authors:  Matthew J Neale; Jing Pan; Scott Keeney
Journal:  Nature       Date:  2005-08-18       Impact factor: 49.962

2.  Ctp1 is a cell-cycle-regulated protein that functions with Mre11 complex to control double-strand break repair by homologous recombination.

Authors:  Oliver Limbo; Charly Chahwan; Yoshiki Yamada; Robertus A M de Bruin; Curt Wittenberg; Paul Russell
Journal:  Mol Cell       Date:  2007-10-12       Impact factor: 17.970

Review 3.  How telomeres are replicated.

Authors:  Eric Gilson; Vincent Géli
Journal:  Nat Rev Mol Cell Biol       Date:  2007-10       Impact factor: 94.444

Review 4.  Genome instability: a mechanistic view of its causes and consequences.

Authors:  Andrés Aguilera; Belén Gómez-González
Journal:  Nat Rev Genet       Date:  2008-03       Impact factor: 53.242

5.  Contribution of RecFOR machinery of homologous recombination to cell survival after loss of a restriction-modification gene complex.

Authors:  Naofumi Handa; Asao Ichige; Ichizo Kobayashi
Journal:  Microbiology       Date:  2009-04-23       Impact factor: 2.777

6.  Sgs1 helicase and two nucleases Dna2 and Exo1 resect DNA double-strand break ends.

Authors:  Zhu Zhu; Woo-Hyun Chung; Eun Yong Shim; Sang Eun Lee; Grzegorz Ira
Journal:  Cell       Date:  2008-09-19       Impact factor: 41.582

Review 7.  Nonhomologous end joining in yeast.

Authors:  James M Daley; Phillip L Palmbos; Dongliang Wu; Thomas E Wilson
Journal:  Annu Rev Genet       Date:  2005       Impact factor: 16.830

8.  Recruitment and dissociation of nonhomologous end joining proteins at a DNA double-strand break in Saccharomyces cerevisiae.

Authors:  Dongliang Wu; Leana M Topper; Thomas E Wilson
Journal:  Genetics       Date:  2008-02-03       Impact factor: 4.562

9.  The nuclease activity of Mre11 is required for meiosis but not for mating type switching, end joining, or telomere maintenance.

Authors:  S Moreau; J R Ferguson; L S Symington
Journal:  Mol Cell Biol       Date:  1999-01       Impact factor: 4.272

10.  Break dosage, cell cycle stage and DNA replication influence DNA double strand break response.

Authors:  Christian Zierhut; John F X Diffley
Journal:  EMBO J       Date:  2008-05-29       Impact factor: 11.598

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  112 in total

1.  ATP hydrolysis by RAD50 protein switches MRE11 enzyme from endonuclease to exonuclease.

Authors:  Jerzy Majka; Brian Alford; Juan Ausio; Ron M Finn; Cynthia T McMurray
Journal:  J Biol Chem       Date:  2011-11-18       Impact factor: 5.157

2.  Role for Rif1 in the checkpoint response to damaged DNA in Xenopus egg extracts.

Authors:  Sanjay Kumar; Hae Yong Yoo; Akiko Kumagai; Anna Shevchenko; Andrej Shevchenko; William G Dunphy
Journal:  Cell Cycle       Date:  2012-03-15       Impact factor: 4.534

3.  The RecQ4 orthologue Hrq1 is critical for DNA interstrand cross-link repair and genome stability in fission yeast.

Authors:  Lynda M Groocock; John Prudden; J Jefferson P Perry; Michael N Boddy
Journal:  Mol Cell Biol       Date:  2011-11-07       Impact factor: 4.272

4.  Synergic and opposing activities of thermophilic RecQ-like helicase and topoisomerase 3 proteins in Holliday junction processing and replication fork stabilization.

Authors:  Anna Valenti; Mariarita De Felice; Giuseppe Perugino; Anna Bizard; Marc Nadal; Mosè Rossi; Maria Ciaramella
Journal:  J Biol Chem       Date:  2012-06-21       Impact factor: 5.157

5.  Mechanism of DNA damage tolerance.

Authors:  Xin Bi
Journal:  World J Biol Chem       Date:  2015-08-26

6.  Exonuclease of human DNA polymerase gamma disengages its strand displacement function.

Authors:  Quan He; Christie K Shumate; Mark A White; Ian J Molineux; Y Whitney Yin
Journal:  Mitochondrion       Date:  2013-08-30       Impact factor: 4.160

7.  Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint.

Authors:  Catherine A Cremona; Prabha Sarangi; Yan Yang; Lisa E Hang; Sadia Rahman; Xiaolan Zhao
Journal:  Mol Cell       Date:  2012-01-26       Impact factor: 17.970

8.  EXO1 suppresses double-strand break induced homologous recombination between diverged sequences in mammalian cells.

Authors:  Chun-Chin Chen; Elena Avdievich; Yongwei Zhang; Yu Zhang; Kaichun Wei; Kyeryoung Lee; Winfried Edelmann; Maria Jasin; Jeannine R LaRocque
Journal:  DNA Repair (Amst)       Date:  2017-07-10

9.  You break it, you fix it: functions for AID downstream of deamination.

Authors:  Rebecca K Delker; F Nina Papavasiliou
Journal:  Nat Immunol       Date:  2013-11       Impact factor: 25.606

10.  Genetic and biochemical evidences reveal novel insights into the mechanism underlying Saccharomyces cerevisiae Sae2-mediated abrogation of DNA replication stress.

Authors:  Indrajeet Ghodke; K Muniyappa
Journal:  J Biosci       Date:  2016-12       Impact factor: 1.826

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