Literature DB >> 21225317

Genetic differentiation in natural populations of a keystone bunchgrass (Aristida stricta) across its native range.

Jyotsna Sharma1, Sheeja George, Madhav Pandey, Jeff Norcini, Hector Perez.   

Abstract

Aristida stricta Michx. (Poaceae) is a perennial bunchgrass native to the Southeastern Coastal Plain of North America where it is a keystone species in the longleaf pine savannas and slash pine flatwoods from southeastern North Carolina to Florida, and westward to the coast of Mississippi. We examined genetic relationships within and among ten populations of A. stricta by using eight inter-simple sequence repeat (ISSR) markers to generate band frequency data for 32 individuals from each sampled population. An analysis of molecular variance showed that 38% of the variation resided among populations while 62% was attributable to variation within populations. Grouping the populations by habitat or by geographic location did not show significant differentiation between the groups. Overall, pair-wise geographic and genetic distances were not correlated. Data indicate that while individuals within each population are genetically diverse, there seemingly are barriers to gene flow across populations leading to their divergence. Each population contains several exclusive loci suggesting that limited gene flow and/or genetic drift are likely leading to this pattern of localization. Our results, coupled with those of the previous studies that presented evidence for local adaptation and phenotypic differences among populations, suggest that there is sufficient differentiation among populations of this species to warrant: (1) maintenance of the existing genetic diversity at individual sites, and (2) use of local seed and plant sources for conservation projects.

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Year:  2011        PMID: 21225317     DOI: 10.1007/s10709-010-9545-x

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  11 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study.

Authors:  G Evanno; S Regnaut; J Goudet
Journal:  Mol Ecol       Date:  2005-07       Impact factor: 6.185

3.  Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data.

Authors:  L Excoffier; P E Smouse; J M Quattro
Journal:  Genetics       Date:  1992-06       Impact factor: 4.562

4.  The homozygosity test of neutrality.

Authors:  G A Watterson
Journal:  Genetics       Date:  1978-02       Impact factor: 4.562

5.  Genetic diversity of the endangered and narrow endemic Piperia yadonii (Orchidaceae) assessed with ISSR polymorphisms.

Authors:  Sheeja George; Jyotsna Sharma; Vern L Yadon
Journal:  Am J Bot       Date:  2009-10-26       Impact factor: 3.844

6.  TreeView: an application to display phylogenetic trees on personal computers.

Authors:  R D Page
Journal:  Comput Appl Biosci       Date:  1996-08

7.  The sampling theory of selectively neutral alleles.

Authors:  W J Ewens
Journal:  Theor Popul Biol       Date:  1972-03       Impact factor: 1.570

8.  Analysis of population genetic structure with RAPD markers.

Authors:  M Lynch; B G Milligan
Journal:  Mol Ecol       Date:  1994-04       Impact factor: 6.185

9.  The detection of disease clustering and a generalized regression approach.

Authors:  N Mantel
Journal:  Cancer Res       Date:  1967-02       Impact factor: 12.701

10.  GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.

Authors:  Rod Peakall; Peter E Smouse
Journal:  Bioinformatics       Date:  2012-07-20       Impact factor: 6.937

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  2 in total

1.  Genetic diversity of Centella asiatica in China analyzed by inter-simple sequence repeat (ISSR) markers: combination analysis with chemical diversity.

Authors:  Xiao-Gang Zhang; Ting Han; Zhi-Gao He; Qiao-Yan Zhang; Lei Zhang; Khalid Rahman; Lu-Ping Qin
Journal:  J Nat Med       Date:  2011-08-19       Impact factor: 2.343

2.  Is genetic structure of the southern pygmy mouse Baiomys musculus (Cricetidae) related to human-induced spatial landscape heterogeneity in a tropical dry forest?

Authors:  Valeria Vargas; David Valenzuela-Galván; Raúl E Alcalá
Journal:  Genetica       Date:  2012-09-18       Impact factor: 1.082

  2 in total

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