Literature DB >> 21224206

The diversity and molecular modelling analysis of B₁₂ and B₁₂-independent glycerol dehydratases.

Yuemin Liu1, August A Gallo, Rakesh K Bajpai, Andrei Chistoserdov, Andrew Nelson, Leah Segura, Wu Xu.   

Abstract

To broaden our knowledge on the diversity of glycerol dehydratases, comprehensive sequence and molecular modelling analyses of these enzymes were performed. Our sequence analysis showed that B₁₂-dependent and B₁₂-independent glycerol dehydratases are not related, suggesting that they evolved from different ancestors. Second, our study demonstrated that a gene fusion event occurred between α and β subunits of B₁₂-dependent glycerol dehydratases in several bacteria during enzyme evolution. In addition, our sequence and molecular modelling analyses revealed more B₁₂-independent glycerol dehydratases including hypothetical proteins. Furthermore, we found that some microorganisms contain both B₁₂-dependent and B₁₂-independent glycerol dehydratases in their genomes.

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Year:  2010        PMID: 21224206     DOI: 10.1504/IJBRA.2010.037988

Source DB:  PubMed          Journal:  Int J Bioinform Res Appl        ISSN: 1744-5485


  5 in total

1.  All-atomic molecular dynamic studies of human CDK8: insight into the A-loop, point mutations and binding with its partner CycC.

Authors:  Wu Xu; Benjamin Amire-Brahimi; Xiao-Jun Xie; Liying Huang; Jun-Yuan Ji
Journal:  Comput Biol Chem       Date:  2014-04-03       Impact factor: 2.877

2.  Bcl10 is an essential regulator for A20 gene expression.

Authors:  Wu Xu; Liquan Xue; Yi Sun; Aline Henry; Jennifer M Battle; Mathieu Micault; Stephan W Morris
Journal:  J Physiol Biochem       Date:  2013-05-16       Impact factor: 4.158

Review 3.  Production of 3-Hydroxypropanoic Acid From Glycerol by Metabolically Engineered Bacteria.

Authors:  Carsten Jers; Aida Kalantari; Abhroop Garg; Ivan Mijakovic
Journal:  Front Bioeng Biotechnol       Date:  2019-05-24

4.  2-Butanol and butanone production in Saccharomyces cerevisiae through combination of a B12 dependent dehydratase and a secondary alcohol dehydrogenase using a TEV-based expression system.

Authors:  Payam Ghiaci; Joakim Norbeck; Christer Larsson
Journal:  PLoS One       Date:  2014-07-23       Impact factor: 3.240

5.  Evolutionary and Functional Relationships of the dha Regulon by Genomic Context Analysis.

Authors:  Marinalva Martins-Pinheiro; Wanessa C Lima; Huma Asif; Cláudio A Oller; Carlos F M Menck
Journal:  PLoS One       Date:  2016-03-03       Impact factor: 3.240

  5 in total

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