Literature DB >> 21221421

COMPUTER-AIDED GLEASON GRADING OF PROSTATE CANCER HISTOPATHOLOGICAL IMAGES USING TEXTON FORESTS.

Parmeshwar Khurd1, Claus Bahlmann, Peter Maday, Ali Kamen, Summer Gibbs-Strauss, Elizabeth M Genega, John V Frangioni.   

Abstract

The Gleason score is the single most important prognostic indicator for prostate cancer candidates and plays a significant role in treatment planning. Histopathological imaging of prostate tissue samples provides the gold standard for obtaining the Gleason score, but the manual assignment of Gleason grades is a labor-intensive and error-prone process. We have developed a texture classification system for automatic and reproducible Gleason grading. Our system characterizes the texture in images belonging to a tumor grade by clustering extracted filter responses at each pixel into textons (basic texture elements). We have used random forests to cluster the filter responses into textons followed by the spatial pyramid match kernel in conjunction with an SVM classifier. We have demonstrated the efficacy of our system in distinguishing between Gleason grades 3 and 4.

Entities:  

Year:  2010        PMID: 21221421      PMCID: PMC3017375          DOI: 10.1109/ISBI.2010.5490096

Source DB:  PubMed          Journal:  Proc IEEE Int Symp Biomed Imaging        ISSN: 1945-7928


  5 in total

1.  Automatic classification for pathological prostate images based on fractal analysis.

Authors:  Po-Whei Huang; Cheng-Hsiung Lee
Journal:  IEEE Trans Med Imaging       Date:  2009-01-19       Impact factor: 10.048

2.  Prostate MR imaging: tissue characterization with pharmacokinetic volume and blood flow parameters and correlation with histologic parameters.

Authors:  Tobias Franiel; Lutz Lüdemann; Birgit Rudolph; Hagen Rehbein; Carsten Stephan; Matthias Taupitz; Dirk Beyersdorff
Journal:  Radiology       Date:  2009-07       Impact factor: 11.105

3.  Multifeature prostate cancer diagnosis and Gleason grading of histological images.

Authors:  Ali Tabesh; Mikhail Teverovskiy; Ho-Yuen Pang; Vinay P Kumar; David Verbel; Angeliki Kotsianti; Olivier Saidi
Journal:  IEEE Trans Med Imaging       Date:  2007-10       Impact factor: 10.048

4.  Virtual microscopy and grid-enabled decision support for large-scale analysis of imaged pathology specimens.

Authors:  Lin Yang; Wenjin Chen; Peter Meer; Gratian Salaru; Lauri A Goodell; Viktors Berstis; David J Foran
Journal:  IEEE Trans Inf Technol Biomed       Date:  2009-04-14

5.  Sampling the spatial patterns of cancer: optimized biopsy procedures for estimating prostate cancer volume and Gleason Score.

Authors:  Yangming Ou; Dinggang Shen; Jianchao Zeng; Leon Sun; Judd Moul; Christos Davatzikos
Journal:  Med Image Anal       Date:  2009-05-23       Impact factor: 8.545

  5 in total
  16 in total

1.  Near-infrared fluorescent digital pathology for the automation of disease diagnosis and biomarker assessment.

Authors:  Summer L Gibbs; Elizabeth Genega; Jeffery Salemi; Vida Kianzad; Haley L Goodwill; Yang Xie; Rafiou Oketokoun; Parmeshwar Khurd; Ali Kamen; John V Frangioni
Journal:  Mol Imaging       Date:  2015       Impact factor: 4.488

2.  Localization of Diagnostically Relevant Regions of Interest in Whole Slide Images: a Comparative Study.

Authors:  Ezgi Mercan; Selim Aksoy; Linda G Shapiro; Donald L Weaver; Tad T Brunyé; Joann G Elmore
Journal:  J Digit Imaging       Date:  2016-08       Impact factor: 4.056

3.  Digital Pathology: Data-Intensive Frontier in Medical Imaging: Health-information sharing, specifically of digital pathology, is the subject of this paper which discusses how sharing the rich images in pathology can stretch the capabilities of all otherwise well-practiced disciplines.

Authors:  Lee A D Cooper; Alexis B Carter; Alton B Farris; Fusheng Wang; Jun Kong; David A Gutman; Patrick Widener; Tony C Pan; Sharath R Cholleti; Ashish Sharma; Tahsin M Kurc; Daniel J Brat; Joel H Saltz
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2012-04       Impact factor: 10.961

Review 4.  Robust Nucleus/Cell Detection and Segmentation in Digital Pathology and Microscopy Images: A Comprehensive Review.

Authors:  Fuyong Xing; Lin Yang
Journal:  IEEE Rev Biomed Eng       Date:  2016-01-06

5.  Computer aided analysis of prostate histopathology images Gleason grading especially for Gleason score 7.

Authors:  Jian Ren; Evita T Sadimin; Daihou Wang; Jonathan I Epstein; David J Foran; Xin Qi
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2015

6.  Assessment of the potential of pathological stains in human prostate cancer.

Authors:  Anchit Khanna; Rani Patil; Abhay Deshmukh
Journal:  J Clin Diagn Res       Date:  2014-01-12

7.  Integrated morphologic analysis for the identification and characterization of disease subtypes.

Authors:  Lee A D Cooper; Jun Kong; David A Gutman; Fusheng Wang; Jingjing Gao; Christina Appin; Sharath Cholleti; Tony Pan; Ashish Sharma; Lisa Scarpace; Tom Mikkelsen; Tahsin Kurc; Carlos S Moreno; Daniel J Brat; Joel H Saltz
Journal:  J Am Med Inform Assoc       Date:  2012-01-24       Impact factor: 4.497

8.  Spatial organization and correlations of cell nuclei in brain tumors.

Authors:  Yang Jiao; Hal Berman; Tim-Rasmus Kiehl; Salvatore Torquato
Journal:  PLoS One       Date:  2011-11-16       Impact factor: 3.240

9.  Automated image based prominent nucleoli detection.

Authors:  Choon K Yap; Emarene M Kalaw; Malay Singh; Kian T Chong; Danilo M Giron; Chao-Hui Huang; Li Cheng; Yan N Law; Hwee Kuan Lee
Journal:  J Pathol Inform       Date:  2015-06-23

10.  A vocabulary for the identification and delineation of teratoma tissue components in hematoxylin and eosin-stained samples.

Authors:  Ramamurthy Bhagavatula; Michael T McCann; Matthew Fickus; Carlos A Castro; John A Ozolek; Jelena Kovacevic
Journal:  J Pathol Inform       Date:  2014-06-30
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