Literature DB >> 21219028

Effect of morphology of thin DNA films on the electron stimulated desorption of anions.

Nasrin Mirsaleh-Kohan1, Andrew D Bass, Léon Sanche.   

Abstract

We present a comparison between the electron stimulated desorption (ESD) of anions from DNA samples prepared by lyophilization (an example of poorly organized or nonuniform films) and molecular self-assembly (well-ordered films). The lyophilization (or freeze- drying) method is perhaps the most frequently employed technique for forming DNA films for studies of low-energy electron (LEE) interactions leading to DNA damage; however, this technique usually produces nonuniform films with considerable clustering which may affect DNA configuration and enhance sample charging when the film is irradiated. Our results confirm the general validity of ESD measurements obtained with lyophilized samples, but also reveal limitations of lyophilization for LEE studies on DNA films. Specifically we observe some modulation of structures, associated with dissociative electron attachment, in the anion yield functions from different types of DNA film, confirming that conformational factors play a role in the LEE induced damage to DNA.

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Year:  2011        PMID: 21219028      PMCID: PMC3217040          DOI: 10.1063/1.3520562

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  22 in total

1.  Cross sections for low-energy (10-50 eV) electron damage to DNA.

Authors:  B Boudaïffa; P Cloutier; D Hunting; M A Huels; L Sanche
Journal:  Radiat Res       Date:  2002-03       Impact factor: 2.841

2.  Effect of the Condensed Phase on Dissociative Electron Attachment: CH3Cl Condensed on a Kr Surface.

Authors: 
Journal:  Phys Rev Lett       Date:  1995-11-06       Impact factor: 9.161

3.  Mechanism and site of attack for direct damage to DNA by low-energy electrons.

Authors:  X Pan; L Sanche
Journal:  Phys Rev Lett       Date:  2005-05-17       Impact factor: 9.161

4.  Nucleobase orientation and ordering in films of single-stranded DNA on gold.

Authors:  Dmitri Y Petrovykh; V Pérez-Dieste; Aric Opdahl; Hiromi Kimura-Suda; J M Sullivan; Michael J Tarlov; F J Himpsel; Lloyd J Whitman
Journal:  J Am Chem Soc       Date:  2006-01-11       Impact factor: 15.419

5.  Electron energy-loss distributions in solid, dry DNA.

Authors:  J A LaVerne; S M Pimblott
Journal:  Radiat Res       Date:  1995-02       Impact factor: 2.841

6.  Electron stimulated desorption of anionic fragments from films of pure and electron-irradiated thiophene.

Authors:  M N Hedhili; P Cloutier; A D Bass; T E Madey; L Sanche
Journal:  J Chem Phys       Date:  2006-09-07       Impact factor: 3.488

7.  Comparison and assessment of electron cross sections for Monte Carlo track structure codes.

Authors:  S Uehara; H Nikjoo; D T Goodhead
Journal:  Radiat Res       Date:  1999-08       Impact factor: 2.841

8.  X-ray photoelectron spectroscopy analysis of gold surfaces after removal of thiolated DNA oligomers by ultraviolet/ozone treatment.

Authors:  Nasrin Mirsaleh-Kohan; Andrew D Bass; Léon Sanche
Journal:  Langmuir       Date:  2010-05-04       Impact factor: 3.882

9.  DNA damage by low-energy electron impact: dependence on guanine content.

Authors:  T Solomun; H Seitz; H Sturm
Journal:  J Phys Chem B       Date:  2009-08-27       Impact factor: 2.991

10.  Intrinsic and extrinsic factors in anion electron-stimulated desorption: D- from deuterated hydrocarbons condensed on Kr and water ice films.

Authors:  Paweł Mozejko; Andrew D Bass; Luc Parenteau; Léon Sanche
Journal:  J Chem Phys       Date:  2004-11-22       Impact factor: 3.488

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  7 in total

1.  Low energy electron stimulated desorption from DNA films dosed with oxygen.

Authors:  Nasrin Mirsaleh-Kohan; Andrew D Bass; Pierre Cloutier; Sylvain Massey; Léon Sanche
Journal:  J Chem Phys       Date:  2012-06-21       Impact factor: 3.488

2.  Note: transient negative ions as initiators of oxygen fixation in <20 eV electron-irradiated DNA.

Authors:  Sylvain Massey; Andrew D Bass; Léon Sanche
Journal:  J Chem Phys       Date:  2013-11-14       Impact factor: 3.488

3.  Dissociative electron attachment to DNA-diamine thin films: impact of the DNA close environment on the OH- and O- decay channels.

Authors:  Omar Boulanouar; Michel Fromm; Christophe Mavon; Pierre Cloutier; Léon Sanche
Journal:  J Chem Phys       Date:  2013-08-07       Impact factor: 3.488

4.  Electron stimulated desorption of anions from native and brominated single stranded oligonucleotide trimers.

Authors:  Katarzyna Polska; Janusz Rak; Andrew D Bass; Pierre Cloutier; Léon Sanche
Journal:  J Chem Phys       Date:  2012-02-21       Impact factor: 3.488

5.  Loss of cellular transformation efficiency induced by DNA irradiation with low-energy (10 eV) electrons.

Authors:  Saloua Kouass Sahbani; Leon Sanche; Pierre Cloutier; Andrew D Bass; Darel J Hunting
Journal:  J Phys Chem B       Date:  2014-11-10       Impact factor: 2.991

6.  Absolute cross section for low-energy-electron damage to condensed macromolecules: a case study of DNA.

Authors:  Mohammad Rezaee; Pierre Cloutier; Andrew D Bass; Marc Michaud; Darel J Hunting; Léon Sanche
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-09-14

7.  Induction of Strand Breaks in DNA films by Low Energy Electrons and Soft X-ray under Nitrous Oxide Atmosphere.

Authors:  Elahe Alizadeh; Léon Sanche
Journal:  Radiat Phys Chem Oxf Engl 1993       Date:  2012-01-01       Impact factor: 2.858

  7 in total

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