Literature DB >> 21217639

Determination of transcription factor binding.

Edwin Cheung, Yijun Ruan.   

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Year:  2011        PMID： 21217639     DOI： 10.1038/ng0111-11

Source DB:  PubMed          Journal:  Nat Genet        ISSN： 1061-4036            Impact factor:   38.330


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  8 in total

1.  Opening of compacted chromatin by early developmental transcription factors HNF3 (FoxA) and GATA-4.

Authors:  Lisa Ann Cirillo; Frank Robert Lin; Isabel Cuesta; Dara Friedman; Michal Jarnik; Kenneth S Zaret
Journal:  Mol Cell       Date:  2002-02       Impact factor: 17.970

2.  Genome-wide analysis of estrogen receptor binding sites.

Authors:  Jason S Carroll; Clifford A Meyer; Jun Song; Wei Li; Timothy R Geistlinger; Jérôme Eeckhoute; Alexander S Brodsky; Erika Krasnickas Keeton; Kirsten C Fertuck; Giles F Hall; Qianben Wang; Stefan Bekiranov; Victor Sementchenko; Edward A Fox; Pamela A Silver; Thomas R Gingeras; X Shirley Liu; Myles Brown
Journal:  Nat Genet       Date:  2006-10-01       Impact factor: 38.330

3.  FoxA1 translates epigenetic signatures into enhancer-driven lineage-specific transcription.

Authors:  Mathieu Lupien; Jérôme Eeckhoute; Clifford A Meyer; Qianben Wang; Yong Zhang; Wei Li; Jason S Carroll; X Shirley Liu; Myles Brown
Journal:  Cell       Date:  2008-03-21       Impact factor: 41.582

Review 4.  Oestrogen-receptor-mediated transcription and the influence of co-factors and chromatin state.

Authors:  Kelly A Green; Jason S Carroll
Journal:  Nat Rev Cancer       Date:  2007-09       Impact factor: 60.716

5.  Binding of the winged-helix transcription factor HNF3 to a linker histone site on the nucleosome.

Authors:  L A Cirillo; C E McPherson; P Bossard; K Stevens; S Cherian; E Y Shim; K L Clark; S K Burley; K S Zaret
Journal:  EMBO J       Date:  1998-01-02       Impact factor: 11.598

6.  An oestrogen-receptor-alpha-bound human chromatin interactome.

Authors:  Melissa J Fullwood; Mei Hui Liu; You Fu Pan; Jun Liu; Han Xu; Yusoff Bin Mohamed; Yuriy L Orlov; Stoyan Velkov; Andrea Ho; Poh Huay Mei; Elaine G Y Chew; Phillips Yao Hui Huang; Willem-Jan Welboren; Yuyuan Han; Hong Sain Ooi; Pramila N Ariyaratne; Vinsensius B Vega; Yanquan Luo; Peck Yean Tan; Pei Ye Choy; K D Senali Abayratna Wansa; Bing Zhao; Kar Sian Lim; Shi Chi Leow; Jit Sin Yow; Roy Joseph; Haixia Li; Kartiki V Desai; Jane S Thomsen; Yew Kok Lee; R Krishna Murthy Karuturi; Thoreau Herve; Guillaume Bourque; Hendrik G Stunnenberg; Xiaoan Ruan; Valere Cacheux-Rataboul; Wing-Kin Sung; Edison T Liu; Chia-Lin Wei; Edwin Cheung; Yijun Ruan
Journal:  Nature       Date:  2009-11-05       Impact factor: 49.962

7.  FOXA1 is a key determinant of estrogen receptor function and endocrine response.

Authors:  Antoni Hurtado; Kelly A Holmes; Caryn S Ross-Innes; Dominic Schmidt; Jason S Carroll
Journal:  Nat Genet       Date:  2010-12-12       Impact factor: 38.330

8.  Whole-genome cartography of estrogen receptor alpha binding sites.

Authors:  Chin-Yo Lin; Vinsensius B Vega; Jane S Thomsen; Tao Zhang; Say Li Kong; Min Xie; Kuo Ping Chiu; Leonard Lipovich; Daniel H Barnett; Fabio Stossi; Ailing Yeo; Joshy George; Vladimir A Kuznetsov; Yew Kok Lee; Tze Howe Charn; Nallasivam Palanisamy; Lance D Miller; Edwin Cheung; Benita S Katzenellenbogen; Yijun Ruan; Guillaume Bourque; Chia-Lin Wei; Edison T Liu
Journal:  PLoS Genet       Date:  2007-04-17       Impact factor: 5.917
  8 in total
  2 in total

1.  Establishment of active chromatin structure at enhancer elements by mixed-lineage leukemia 1 to initiate estrogen-dependent gene expression.

Authors:  Kwang Won Jeong; Claudia Andreu-Vieyra; Jueng Soo You; Peter A Jones; Michael R Stallcup
Journal:  Nucleic Acids Res       Date:  2013-11-27       Impact factor: 16.971

2.  Genomic feature extraction and comparison based on global alignment of ChIP-sequencing data.

Authors:  Binhua Tang
Journal:  Bioengineered       Date:  2016-09-30       Impact factor: 3.269
  2 in total

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