Literature DB >> 21214945

A stem cell niche dominance theorem.

Olaf Wolkenhauer1, Darryl K Shibata, Mihajlo D Mesarović.   

Abstract

BACKGROUND: Multilevelness is a defining characteristic of complex systems. For example, in the intestinal tissue the epithelial lining is organized into crypts that are maintained by a niche of stem cells. The behavior of the system 'as a whole' is considered to emerge from the functioning and interactions of its parts. What we are seeking here is a conceptual framework to demonstrate how the "fate" of intestinal crypts is an emergent property that inherently arises from the complex yet robust underlying biology of stem cells.
RESULTS: We establish a conceptual framework in which to formalize cross-level principles in the context of tissue organization. To this end we provide a definition for stemness, which is the propensity of a cell lineage to contribute to a tissue fate. We do not consider stemness a property of a cell but link it to the process in which a cell lineage contributes towards tissue (mal)function. We furthermore show that the only logically feasible relationship between the stemness of cell lineages and the emergent fate of their tissue, which satisfies the given criteria, is one of dominance from a particular lineage.
CONCLUSIONS: The dominance theorem, conceived and proven in this paper, provides support for the concepts of niche succession and monoclonal conversion in intestinal crypts as bottom-up relations, while crypt fission is postulated to be a top-down principle.

Entities:  

Mesh:

Year:  2011        PMID: 21214945      PMCID: PMC3030540          DOI: 10.1186/1752-0509-5-4

Source DB:  PubMed          Journal:  BMC Syst Biol        ISSN: 1752-0509


  29 in total

1.  Investigating stem cells in human colon by using methylation patterns.

Authors:  Y Yatabe; S Tavaré; D Shibata
Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

2.  Tissue stem cells: definition, plasticity, heterogeneity, self-organization and models--a conceptual approach.

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Journal:  Cells Tissues Organs       Date:  2002       Impact factor: 2.481

Review 3.  Methylation reveals a niche: stem cell succession in human colon crypts.

Authors:  Kyoung-Mee Kim; Darryl Shibata
Journal:  Oncogene       Date:  2002-08-12       Impact factor: 9.867

4.  A stem cell niche theory of intestinal crypt maintenance based on a study of somatic mutation in colonic mucosa.

Authors:  E D Williams; A P Lowes; D Williams; G T Williams
Journal:  Am J Pathol       Date:  1992-10       Impact factor: 4.307

5.  Intestinal stem cell replacement follows a pattern of neutral drift.

Authors:  Carlos Lopez-Garcia; Allon M Klein; Benjamin D Simons; Douglas J Winton
Journal:  Science       Date:  2010-09-23       Impact factor: 47.728

6.  Origin, differentiation and renewal of the four main epithelial cell types in the mouse small intestine. V. Unitarian Theory of the origin of the four epithelial cell types.

Authors:  H Cheng; C P Leblond
Journal:  Am J Anat       Date:  1974-12

7.  Crypt fission in the small intestine and colon. A mechanism for the emergence of G6PD locus-mutated crypts after treatment with mutagens.

Authors:  H S Park; R A Goodlad; N A Wright
Journal:  Am J Pathol       Date:  1995-11       Impact factor: 4.307

Review 8.  Molecular and clinical basis for the regeneration of human gastrointestinal epithelia.

Authors:  Ryuichi Okamoto; Mamoru Watanabe
Journal:  J Gastroenterol       Date:  2004-01       Impact factor: 7.527

9.  Pretumor progression: clonal evolution of human stem cell populations.

Authors:  Peter Calabrese; Simon Tavaré; Darryl Shibata
Journal:  Am J Pathol       Date:  2004-04       Impact factor: 4.307

Review 10.  Stem cells: attributes, cycles, spirals, pitfalls and uncertainties. Lessons for and from the crypt.

Authors:  C S Potten; M Loeffler
Journal:  Development       Date:  1990-12       Impact factor: 6.868

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  2 in total

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2.  Population dynamics of normal and leukaemia stem cells in the haematopoietic stem cell niche show distinct regimes where leukaemia will be controlled.

Authors:  Adam L MacLean; Cristina Lo Celso; Michael P H Stumpf
Journal:  J R Soc Interface       Date:  2013-01-24       Impact factor: 4.118

  2 in total

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