Literature DB >> 21214261

Arsenate replacing phosphate: alternative life chemistries and ion promiscuity.

Dan S Tawfik1, Ronald E Viola.   

Abstract

A newly identified bacterial strain that can grow in the presence of arsenate and possibly in the absence of phosphate, has raised much interest, but also fueled an active debate. Can arsenate substitute for phosphate in some or possibly in most of the absolutely essential phosphate-based biomolecules, including DNA? If so, then the possibility of alternative, arsenic-based life forms must be considered. The physicochemical similarity of these two oxyanions speaks in favor of this idea. However, arsenate-esters and arsenate-diesters in particular are extremely unstable in aqueous media. Here, we explore the potential of arsenate to be used as substrate by phosphate-utilizing enzymes. We review the existing literature on arsenate enzymology, that intriguingly, dates back to the 1930s. We address the issue of how and to what degree proteins can distinguish between arsenate and phosphate and what is known in general about oxyanion specificity. We also discuss how phosphate-arsenate promiscuity may affect evolutionary transitions between phosphate- and arsenate-based biochemistry. Finally, we highlight potential applications of arsenate as a structural and mechanistic probe of enzymes whose catalyzed reactions involve the making or breaking of phosphoester bonds.

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Year:  2011        PMID: 21214261      PMCID: PMC3070116          DOI: 10.1021/bi200002a

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  25 in total

1.  Elucidation of the phosphate binding mode of DING proteins revealed by subangstrom X-ray crystallography.

Authors:  Dorothee Liebschner; Mikael Elias; Sèbastien Moniot; Bertrand Fournier; Ken Scott; Christian Jelsch; Benoit Guillot; Claude Lecomte; Eric Chabrière
Journal:  J Am Chem Soc       Date:  2009-06-10       Impact factor: 15.419

2.  New insights into bacterial acquisition of phosphorus in the surface ocean.

Authors:  Angelicque E White
Journal:  Proc Natl Acad Sci U S A       Date:  2009-12-08       Impact factor: 11.205

3.  Self-assembly of the binuclear metal center of phosphotriesterase.

Authors:  H Shim; F M Raushel
Journal:  Biochemistry       Date:  2000-06-27       Impact factor: 3.162

4.  The mechanism of pyrophosphorolysis of RNA by RNA polymerase. Endowment of RNA polymerase with artificial exonuclease activity.

Authors:  T A Rozovskaya; V O Rechinsky; R S Bibilashvili; N B Tarusova; R M Khomutov; H B Dixon
Journal:  Biochem J       Date:  1984-12-01       Impact factor: 3.857

Review 5.  Arsenic toxicity in mammals and aquatic animals: a comparative biochemical approach.

Authors:  Juliane Ventura-Lima; Maurício Reis Bogo; José M Monserrat
Journal:  Ecotoxicol Environ Saf       Date:  2010-11-26       Impact factor: 6.291

6.  Structural basis for discrimination between oxyanion substrates or inhibitors in aspartate-beta-semialdehyde dehydrogenase.

Authors:  Christopher R Faehnle; Julio Blanco; Ronald E Viola
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

7.  Synthesis of 3-arsonopyruvate and its interaction with phosphoenolpyruvate mutase.

Authors:  S Chawla; E K Mutenda; H B Dixon; S Freeman; A W Smith
Journal:  Biochem J       Date:  1995-06-15       Impact factor: 3.857

8.  Reduction and binding of arsenate and dimethylarsinate by glutathione: a magnetic resonance study.

Authors:  M Delnomdedieu; M M Basti; J D Otvos; D J Thomas
Journal:  Chem Biol Interact       Date:  1994-02       Impact factor: 5.192

9.  Recombination and replication in DNA repair of heavily irradiated Deinococcus radiodurans.

Authors:  Dea Slade; Ariel B Lindner; Gregory Paul; Miroslav Radman
Journal:  Cell       Date:  2009-03-20       Impact factor: 41.582

10.  Conservation of structure and activity in Plasmodium purine nucleoside phosphorylases.

Authors:  Apirat Chaikuad; R Leo Brady
Journal:  BMC Struct Biol       Date:  2009-07-03
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  24 in total

1.  Draft genome of halomonas species strain GFAJ-1 (ATCC BAA-2256).

Authors:  Le T Phung; Simon Silver; William L Trimble; Jack A Gilbert
Journal:  J Bacteriol       Date:  2012-04       Impact factor: 3.490

2.  Association of Urinary and Blood Concentrations of Heavy Metals with Measures of Bone Mineral Density Loss: a Data Mining Approach with the Results from the National Health and Nutrition Examination Survey.

Authors:  João Paulo B Ximenez; Ariane Zamarioli; Melissa A Kacena; Rommel Melgaço Barbosa; Fernando Barbosa
Journal:  Biol Trace Elem Res       Date:  2020-04-30       Impact factor: 3.738

3.  Genomic potential for arsenic efflux and methylation varies among global Prochlorococcus populations.

Authors:  Jaclyn K Saunders; Gabrielle Rocap
Journal:  ISME J       Date:  2015-07-07       Impact factor: 10.302

4.  Natural Arsenate DNA?

Authors:  Peter E Nielsen
Journal:  Artif DNA PNA XNA       Date:  2011-01

5.  Controversy over the report on a bacterium that feeds on arsenic.

Authors:  Dipanwita Sengupta; Madhab K Chattopadhyay
Journal:  J Biosci       Date:  2011-09       Impact factor: 1.826

6.  Phosphate-Arsenic Interactions in Halophilic Microorganisms of the Microbial Mat from Laguna Tebenquiche: from the Microenvironment to the Genomes.

Authors:  L A Saona; M Soria; V Durán-Toro; L Wörmer; J Milucka; E Castro-Nallar; C Meneses; M Contreras; M E Farías
Journal:  Microb Ecol       Date:  2021-01-02       Impact factor: 4.552

Review 7.  Uptake, Metabolic Effects and Toxicity of Arsenate and Arsenite in Astrocytes.

Authors:  Ralf Dringen; Sabrina Spiller; Sarah Neumann; Yvonne Koehler
Journal:  Neurochem Res       Date:  2015-04-11       Impact factor: 3.996

8.  The molecular basis of phosphate discrimination in arsenate-rich environments.

Authors:  Mikael Elias; Alon Wellner; Korina Goldin-Azulay; Eric Chabriere; Julia A Vorholt; Tobias J Erb; Dan S Tawfik
Journal:  Nature       Date:  2012-10-03       Impact factor: 49.962

9.  Are rice (Oryza sativa L.) phosphate transporters regulated similarly by phosphate and arsenate? A comprehensive study.

Authors:  E Marie Muehe; Jochen F Eisele; Birgit Daus; Andreas Kappler; Klaus Harter; Christina Chaban
Journal:  Plant Mol Biol       Date:  2014-04-12       Impact factor: 4.076

10.  Characterization of arsenate uptake by cultured primary rat astrocytes.

Authors:  Yvonne Koehler; Ralf Dringen
Journal:  Neurochem Res       Date:  2013-06-01       Impact factor: 3.996

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