Literature DB >> 21207295

Liquid chromatography-mass spectrometry (LC-MS)-based lipidomics for studies of body fluids and tissues.

Heli Nygren1, Tuulikki Seppänen-Laakso, Sandra Castillo, Tuulia Hyötyläinen, Matej Orešič.   

Abstract

In this paper, analytical methodologies for the global profiling of lipids in serum and tissue samples are reported. The sample preparation is based on a modified Folch extraction, and the analysis is carried out with ultrahigh-performance liquid chromatography combined with mass spectrometry (UPLC-MS). For further identification, MS(n) mass spectrometry is carried out utilizing an LTQ-Orbitrap mass spectrometry as the detector. Such a system affords determination of accurate masses and is thus a highly useful tool for lipid identification. The repeatability of the analysis proved to be good, with relative standard errors for spiked samples being between 4.51 and 10.44%. The throughput of the methodology described here is over 100 samples a day.

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Year:  2011        PMID: 21207295     DOI: 10.1007/978-1-61737-985-7_15

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  49 in total

1.  Concentrations of Purine Metabolites Are Elevated in Fluids from Adults and Infants and in Livers from Mice Fed Diets Depleted of Bovine Milk Exosomes and their RNA Cargos.

Authors:  Ana Aguilar-Lozano; Scott Baier; Ryan Grove; Jiang Shu; David Giraud; Amy Leiferman; Kelly E Mercer; Juan Cui; Thomas M Badger; Jiri Adamec; Aline Andres; Janos Zempleni
Journal:  J Nutr       Date:  2018-12-01       Impact factor: 4.798

Review 2.  Metabolomics: A Primer.

Authors:  Xiaojing Liu; Jason W Locasale
Journal:  Trends Biochem Sci       Date:  2017-02-11       Impact factor: 13.807

Review 3.  Metabolomics in the studies of islet autoimmunity and type 1 diabetes.

Authors:  Matej Oresic
Journal:  Rev Diabet Stud       Date:  2012-12-28

4.  Human gut microbes impact host serum metabolome and insulin sensitivity.

Authors:  Helle Krogh Pedersen; Valborg Gudmundsdottir; Henrik Bjørn Nielsen; Tuulia Hyotylainen; Trine Nielsen; Benjamin A H Jensen; Kristoffer Forslund; Falk Hildebrand; Edi Prifti; Gwen Falony; Emmanuelle Le Chatelier; Florence Levenez; Joel Doré; Ismo Mattila; Damian R Plichta; Päivi Pöhö; Lars I Hellgren; Manimozhiyan Arumugam; Shinichi Sunagawa; Sara Vieira-Silva; Torben Jørgensen; Jacob Bak Holm; Kajetan Trošt; Karsten Kristiansen; Susanne Brix; Jeroen Raes; Jun Wang; Torben Hansen; Peer Bork; Søren Brunak; Matej Oresic; S Dusko Ehrlich; Oluf Pedersen
Journal:  Nature       Date:  2016-07-13       Impact factor: 49.962

5.  Metabolome and fecal microbiota in monozygotic twin pairs discordant for weight: a Big Mac challenge.

Authors:  Isabel Bondia-Pons; Johanna Maukonen; Ismo Mattila; Aila Rissanen; Maria Saarela; Jaakko Kaprio; Antti Hakkarainen; Jesper Lundbom; Nina Lundbom; Tuulia Hyötyläinen; Kirsi H Pietiläinen; Matej Orešič
Journal:  FASEB J       Date:  2014-05-20       Impact factor: 5.191

6.  Triomics Analysis of Imatinib-Treated Myeloma Cells Connects Kinase Inhibition to RNA Processing and Decreased Lipid Biosynthesis.

Authors:  Susanne B Breitkopf; Min Yuan; Katja P Helenius; Costas A Lyssiotis; John M Asara
Journal:  Anal Chem       Date:  2015-10-12       Impact factor: 6.986

7.  Interaction between dietary lipids and gut microbiota regulates hepatic cholesterol metabolism.

Authors:  Robert Caesar; Heli Nygren; Matej Orešič; Fredrik Bäckhed
Journal:  J Lipid Res       Date:  2016-01-18       Impact factor: 5.922

8.  Hyperosmolarity-induced lipid droplet formation depends on ceramide production by neutral sphingomyelinase 2.

Authors:  Alexandra Robciuc; Tuulia Hyötyläinen; Matti Jauhiainen; Juha M Holopainen
Journal:  J Lipid Res       Date:  2012-08-15       Impact factor: 5.922

9.  Prediction of non-alcoholic fatty-liver disease and liver fat content by serum molecular lipids.

Authors:  Matej Orešič; Tuulia Hyötyläinen; Anna Kotronen; Peddinti Gopalacharyulu; Heli Nygren; Johanna Arola; Sandra Castillo; Ismo Mattila; Antti Hakkarainen; Ronald J H Borra; Miikka-Juhani Honka; An Verrijken; Sven Francque; Patricia Iozzo; Marja Leivonen; Nabil Jaser; Anne Juuti; Thorkild I A Sørensen; Pirjo Nuutila; Luc Van Gaal; Hannele Yki-Järvinen
Journal:  Diabetologia       Date:  2013-07-04       Impact factor: 10.122

10.  In-depth structural characterization of phospholipids by pairing solution photochemical reaction with charge inversion ion/ion chemistry.

Authors:  Elissia T Franklin; Stella K Betancourt; Caitlin E Randolph; Scott A McLuckey; Yu Xia
Journal:  Anal Bioanal Chem       Date:  2019-01-07       Impact factor: 4.142

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