Literature DB >> 21206027

Crystallization and preliminary crystallographic analysis of the glycoside hydrolase family 115 α-glucuronidase from Streptomyces pristinaespiralis.

Zui Fujimoto1, Hitomi Ichinose, Peter Biely, Satoshi Kaneko.   

Abstract

α-Glucuronidase from Streptomyces pristinaespiralis (SpGlcA115A) is composed of a single-chain peptide containing a catalytic domain belonging to glycosyl hydrolase family 115, a novel family of hemicellulolytic α-glucuronidases. The enzyme catalyzes the hydrolysis of α-linked 4-O-methylglucuronosyl and glucuronosyl residues from both polymeric xylans and oligosaccharides. SpGlcA115A was crystallized at 293 K using the sitting-drop vapour-diffusion method. The crystals belonged to space group R3 and diffracted to a resolution of 1.9 Å.

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Year:  2010        PMID： 21206027      PMCID： PMC3079975          DOI： 10.1107/S1744309110043721

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN： 1744-3091


  8 in total

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Authors:  G Zaide; D Shallom; S Shulami; G Zolotnitsky; G Golan; T Baasov; G Shoham; Y Shoham
Journal:  Eur J Biochem       Date:  2001-05

2.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

3.  Crystal structure of an Exo-1,5-{alpha}-L-arabinofuranosidase from Streptomyces avermitilis provides insights into the mechanism of substrate discrimination between exo- and endo-type enzymes in glycoside hydrolase family 43.

Authors:  Zui Fujimoto; Hitomi Ichinose; Tomoko Maehara; Mariko Honda; Motomitsu Kitaoka; Satoshi Kaneko
Journal:  J Biol Chem       Date:  2010-08-25       Impact factor: 5.157

4.  An alpha-glucuronidase of Schizophyllum commune acting on polymeric xylan.

Authors:  M Tenkanen; M Siika-aho
Journal:  J Biotechnol       Date:  2000-03-10       Impact factor: 3.307

5.  Endo-beta-1,4-xylanase families: differences in catalytic properties.

Authors:  P Biely; M Vrsanská; M Tenkanen; D Kluepfel
Journal:  J Biotechnol       Date:  1997-09-16       Impact factor: 3.307

6.  A beta-l-Arabinopyranosidase from Streptomyces avermitilis is a novel member of glycoside hydrolase family 27.

Authors:  Hitomi Ichinose; Zui Fujimoto; Mariko Honda; Koichi Harazono; Yukifumi Nishimoto; Atsuko Uzura; Satoshi Kaneko
Journal:  J Biol Chem       Date:  2009-07-16       Impact factor: 5.157

7.  A novel family of hemicellulolytic alpha-glucuronidase.

Authors:  Olena Ryabova; Mária Vrsanská; Satoshi Kaneko; Willem H van Zyl; Peter Biely
Journal:  FEBS Lett       Date:  2009-04-01       Impact factor: 4.124

8.  The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics.

Authors:  Brandi L Cantarel; Pedro M Coutinho; Corinne Rancurel; Thomas Bernard; Vincent Lombard; Bernard Henrissat
Journal:  Nucleic Acids Res       Date:  2008-10-05       Impact factor: 16.971
  8 in total
  5 in total

1.  A GH115 α-glucuronidase structure reveals dimerization-mediated substrate binding and a proton wire potentially important for catalysis.

Authors:  Casper Wilkens; Marlene Vuillemin; Bo Pilgaard; Igor Polikarpov; Jens Preben Morth
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-04-20       Impact factor: 5.699

2.  Biochemical and Structural Characterization of a Five-domain GH115 α-Glucuronidase from the Marine Bacterium Saccharophagus degradans 2-40T.

Authors:  Weijun Wang; Ruoyu Yan; Boguslaw P Nocek; Thu V Vuong; Rosa Di Leo; Xiaohui Xu; Hong Cui; Paul Gatenholm; Guillermo Toriz; Maija Tenkanen; Alexei Savchenko; Emma R Master
Journal:  J Biol Chem       Date:  2016-04-18       Impact factor: 5.157

3.  The coordinated action of glucuronoyl esterase and α-glucuronidase promotes the disassembly of lignin-carbohydrate complexes.

Authors:  Olanrewaju Raji; Jenny Arnling Bååth; Thu V Vuong; Johan Larsbrink; Lisbeth Olsson; Emma R Master
Journal:  FEBS Lett       Date:  2021-01-10       Impact factor: 4.124

4.  Evidence that GH115 α-glucuronidase activity, which is required to degrade plant biomass, is dependent on conformational flexibility.

Authors:  Artur Rogowski; Arnaud Baslé; Cristiane S Farinas; Alexandra Solovyova; Jennifer C Mortimer; Paul Dupree; Harry J Gilbert; David N Bolam
Journal:  J Biol Chem       Date:  2013-11-08       Impact factor: 5.157

5.  The two Rasamsonia emersonii α-glucuronidases, ReGH67 and ReGH115, show a different mode-of-action towards glucuronoxylan and glucuronoxylo-oligosaccharides.

Authors:  Patricia Murciano Martínez; Maaike M Appeldoorn; Harry Gruppen; Mirjam A Kabel
Journal:  Biotechnol Biofuels       Date:  2016-05-18       Impact factor: 6.040
  5 in total

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