Literature DB >> 21206021

Cloning, expression, crystallization and preliminary X-ray crystallographic analysis of the co-chaperonin XoGroES from Xanthomonas oryzae pv. oryzae.

Thanh Thi Ngoc Doan1, Sampath Natarajan, Na-Hyun Song, Jisun Kim, Jin-Kwang Kim, Seung-hwan Kim, Pham Tan Viet, Jeong-Gu Kim, Byoung-Moo Lee, Yeh-Jin Ahn, Lin-Woo Kang.   

Abstract

Bacterial blight (BB), a devastating disease caused by Xanthomonas oryzae pv. oryzae (Xoo), causes serious production losses of rice in Asian countries. Protein misfolding may interfere with the function of proteins in all living cells and must be prevented to avoid cellular disaster. All cells naturally contain molecular chaperones that assist the unfolded proteins in folding into the native structure. One of the well characterized chaperone complexes is GroEL-GroES. GroEL, which consists of two chambers, captures misfolded proteins and refolds them. GroES is a co-chaperonin protein that assists the GroEL protein as a lid that temporarily closes the chamber during the folding process. Xoo4289, the GroES gene from Xoo, was cloned and expressed for X-ray crystallographic study. The purified protein (XoGroES) was crystallized using the hanging-drop vapour-diffusion method and a crystal diffracted to 2.0 Å resolution. The crystal belonged to the hexagonal space group P6(1), with unit-cell parameters a=64.4, c=36.5 Å. The crystal contains a single molecule in the asymmetric unit, with a corresponding VM of 2.05 Å3 Da(-1) and a solvent content of 39.9%.

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Year:  2010        PMID: 21206021      PMCID: PMC3079969          DOI: 10.1107/S1744309110038820

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  Mycobacterium tuberculosis chaperonin 10 heptamers self-associate through their biologically active loops.

Authors:  Michael M Roberts; Alun R Coker; Gianluca Fossati; Paolo Mascagni; Anthony R M Coates; Steve P Wood
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

2.  Caging helps proteins fold.

Authors:  D Thirumalai; Dmitri K Klimov; George H Lorimer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-23       Impact factor: 11.205

3.  Genomic approaches to antibacterial discovery.

Authors:  David J Payne; Michael N Gwynn; David J Holmes; Marty Rosenberg
Journal:  Methods Mol Biol       Date:  2004

Review 4.  Drugs for bad bugs: confronting the challenges of antibacterial discovery.

Authors:  David J Payne; Michael N Gwynn; David J Holmes; David L Pompliano
Journal:  Nat Rev Drug Discov       Date:  2006-12-08       Impact factor: 84.694

5.  The crystal structure of the asymmetric GroEL-GroES-(ADP)7 chaperonin complex.

Authors:  Z Xu; A L Horwich; P B Sigler
Journal:  Nature       Date:  1997-08-21       Impact factor: 49.962

6.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

7.  Chaperonin from Thermus thermophilus can protect several enzymes from irreversible heat denaturation by capturing denaturation intermediate.

Authors:  H Taguchi; M Yoshida
Journal:  J Biol Chem       Date:  1993-03-15       Impact factor: 5.157

8.  T-cell recognition of mycobacterial GroES peptides in Thai leprosy patients and contacts.

Authors:  B Chua-Intra; S Peerapakorn; N Davey; S Jurcevic; M Busson; H M Vordermeier; C Pirayavaraporn; J Ivanyi
Journal:  Infect Immun       Date:  1998-10       Impact factor: 3.441

9.  Structure of the heat shock protein chaperonin-10 of Mycobacterium leprae.

Authors:  S C Mande; V Mehra; B R Bloom; W G Hol
Journal:  Science       Date:  1996-01-12       Impact factor: 47.728

Review 10.  Structure and function in GroEL-mediated protein folding.

Authors:  P B Sigler; Z Xu; H S Rye; S G Burston; W A Fenton; A L Horwich
Journal:  Annu Rev Biochem       Date:  1998       Impact factor: 23.643

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