Literature DB >> 21204011

Crystal structure of the C-terminal domain of the ɛ subunit of human translation initiation factor eIF2B.

Jia Wei1, Minze Jia, Cheng Zhang, Mingzhu Wang, Feng Gao, Hang Xu, Weimin Gong.   

Abstract

Eukaryotic translation initiation factor eIF2B, the guanine nucleotide exchange factor (GEF) for eIF2, catalyzes conversion of eIF2·GDP to eIF2·GTP. The eIF2B is composed of five subunits, α, β, γ, δ and ɛ, within which the ɛ subunit is responsible for catalyzing the guanine exchange reaction. Here we present the crystal structure of the C-terminal domain of human eIF2Bɛ (eIF2Bɛ-CTD) at 2.0-Å resolution. The structure resembles a HEAT motif and three charge-rich areas on its surface can be identified. When compared to yeast eIF2Bɛ-CTD, one area involves highly conserved AA boxes while the other two are only partially conserved. In addition, the previously reported mutations in human eIF2Bɛ-CTD, which are related to the loss of the GEF activity and human VWM disease, have been discussed. Based on the structure, most of such mutations tend to destabilize the HEAT motif.

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Year:  2010        PMID: 21204011      PMCID: PMC4875318          DOI: 10.1007/s13238-010-0070-6

Source DB:  PubMed          Journal:  Protein Cell        ISSN: 1674-800X            Impact factor:   14.870


  47 in total

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Review 2.  Gene-specific regulation by general translation factors.

Authors:  Thomas E Dever
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3.  Electrostatics of nanosystems: application to microtubules and the ribosome.

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Review 4.  Translation initiation: structures, mechanisms and evolution.

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Journal:  Q Rev Biophys       Date:  2004 Aug-Nov       Impact factor: 5.318

5.  An eIF5/eIF2 complex antagonizes guanine nucleotide exchange by eIF2B during translation initiation.

Authors:  Chingakham Ranjit Singh; Bumjun Lee; Tsuyoshi Udagawa; Sarah S Mohammad-Qureshi; Yasufumi Yamamoto; Graham D Pavitt; Katsura Asano
Journal:  EMBO J       Date:  2006-09-21       Impact factor: 11.598

6.  Version 1.2 of the Crystallography and NMR system.

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Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

7.  Eukaryotic initiation factor 2B: identification of multiple phosphorylation sites in the epsilon-subunit and their functions in vivo.

Authors:  X Wang; F E Paulin; L E Campbell; E Gomez; K O'Brien; N Morrice; C G Proud
Journal:  EMBO J       Date:  2001-08-15       Impact factor: 11.598

8.  Characterization of the initiation factor eIF2B and its regulation in Drosophila melanogaster.

Authors:  D D Williams; G D Pavitt; C G Proud
Journal:  J Biol Chem       Date:  2000-11-01       Impact factor: 5.157

9.  Specific interaction of eukaryotic translation initiation factor 5 (eIF5) with the beta-subunit of eIF2.

Authors:  S Das; T Maiti; K Das; U Maitra
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10.  Automated MAD and MIR structure solution.

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  10 in total

1.  eIF2B and the Integrated Stress Response: A Structural and Mechanistic View.

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2.  eIF2B-catalyzed nucleotide exchange and phosphoregulation by the integrated stress response.

Authors:  Lillian R Kenner; Aditya A Anand; Henry C Nguyen; Alexander G Myasnikov; Carolin J Klose; Lea A McGeever; Jordan C Tsai; Lakshmi E Miller-Vedam; Peter Walter; Adam Frost
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3.  Novel mechanisms of eIF2B action and regulation by eIF2α phosphorylation.

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Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

4.  Vanishing white matter: Eukaryotic initiation factor 2B model and the impact of missense mutations.

Authors:  Inna Slynko; Stephanie Nguyen; Eline M C Hamilton; Lisanne E Wisse; Iwan J P de Esch; Chris de Graaf; John B Bruning; Christopher G Proud; Truus E M Abbink; Marjo S van der Knaap
Journal:  Mol Genet Genomic Med       Date:  2021-01-12       Impact factor: 2.183

Review 5.  The metaphorical swiss army knife: The multitude and diverse roles of HEAT domains in eukaryotic translation initiation.

Authors:  Daniel Friedrich; Assen Marintchev; Haribabu Arthanari
Journal:  Nucleic Acids Res       Date:  2022-06-10       Impact factor: 19.160

6.  Comparative Transcriptome Analysis on the Regulatory Mechanism of Thoracic Ganglia in Eriocheir sinensis at Post-Molt and Inter-Molt Stages.

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7.  The PCI domains are "winged" HEAT domains.

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Journal:  PLoS One       Date:  2022-09-12       Impact factor: 3.752

Review 8.  Mechanism and Regulation of Protein Synthesis in Saccharomyces cerevisiae.

Authors:  Thomas E Dever; Terri Goss Kinzy; Graham D Pavitt
Journal:  Genetics       Date:  2016-05       Impact factor: 4.562

9.  eIF2B conformation and assembly state regulate the integrated stress response.

Authors:  Morgane Boone; Lan Wang; Rosalie Lawrence; Michael Schoof; Adam Frost; Peter Walter
Journal:  Elife       Date:  2021-03-10       Impact factor: 8.140

10.  A yeast purification system for human translation initiation factors eIF2 and eIF2Bε and their use in the diagnosis of CACH/VWM disease.

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Journal:  PLoS One       Date:  2013-01-15       Impact factor: 3.240

  10 in total

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