| Literature DB >> 21203292 |
Hong Dae Choi, Pil Ja Seo, Byeng Wha Son, Uk Lee.
Abstract
The title compound, C(13)H(14)O(3)S, was prepared by alkaline hydrolysis of ethyl 2-(5,7-dimethyl-3-methyl-sulfanyl-1-benzofuran-2-yl)acetate. In the crystal structure, the carboxyl groups are involved in inter-molecular O-H⋯O hydrogen bonds, which link the mol-ecules into centrosymmetric dimers. These dimers are further packed into stacks along the a axis by weak C-H⋯π inter-actions.Entities:
Year: 2008 PMID: 21203292 PMCID: PMC2962211 DOI: 10.1107/S1600536808022988
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H14O3S | |
| Triclinic, | |
| Hall symbol: -P_1 | Melting point = 420–421 K |
| Mo | |
| Cell parameters from 3835 reflections | |
| θ = 2.3–28.3º | |
| α = 80.91 (3)º | µ = 0.26 mm−1 |
| β = 89.86 (3)º | |
| γ = 80.67 (3)º | Block, colourless |
| 0.40 × 0.40 × 0.20 mm |
| Bruker SMART CCD diffractometer | 2344 independent reflections |
| Radiation source: fine-focus sealed tube | 2156 reflections with |
| Monochromator: graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 26.0º |
| θmin = 1.2º | |
| φ and ω scans | |
| Absorption correction: none | |
| 4707 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2344 reflections | Δρmax = 0.38 e Å−3 |
| 161 parameters | Δρmin = −0.41 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S | 0.85977 (13) | 0.34264 (8) | 0.36615 (3) | 0.0254 (2) | |
| O1 | 0.4166 (3) | 0.8236 (2) | 0.27417 (9) | 0.0223 (4) | |
| O2 | 0.2357 (4) | 0.9616 (2) | 0.44893 (10) | 0.0272 (4) | |
| O3 | 0.6544 (4) | 0.7728 (2) | 0.47532 (11) | 0.0282 (4) | |
| H3O | 0.685 (8) | 0.848 (5) | 0.494 (2) | 0.049 (11)* | |
| C1 | 0.6982 (5) | 0.5473 (3) | 0.30908 (14) | 0.0214 (5) | |
| C2 | 0.7803 (5) | 0.6242 (3) | 0.23378 (14) | 0.0232 (5) | |
| C3 | 0.9867 (5) | 0.5690 (3) | 0.18203 (15) | 0.0268 (5) | |
| H3 | 1.1098 | 0.4574 | 0.1936 | 0.032* | |
| C4 | 1.0055 (6) | 0.6834 (4) | 0.11284 (15) | 0.0293 (6) | |
| C5 | 0.8179 (6) | 0.8526 (3) | 0.09713 (15) | 0.0306 (6) | |
| H5 | 0.8332 | 0.9275 | 0.0505 | 0.037* | |
| C6 | 0.6115 (6) | 0.9133 (3) | 0.14758 (15) | 0.0279 (5) | |
| C7 | 0.6010 (5) | 0.7931 (3) | 0.21521 (14) | 0.0231 (5) | |
| C8 | 0.4821 (5) | 0.6706 (3) | 0.32972 (13) | 0.0211 (5) | |
| C9 | 1.2248 (6) | 0.6283 (4) | 0.05502 (17) | 0.0400 (7) | |
| H9A | 1.4113 | 0.6436 | 0.0718 | 0.060* | |
| H9B | 1.1762 | 0.7043 | 0.0063 | 0.060* | |
| H9C | 1.2265 | 0.5021 | 0.0502 | 0.060* | |
| C10 | 0.4134 (6) | 1.0944 (3) | 0.13076 (17) | 0.0359 (6) | |
| H10A | 0.2325 | 1.0833 | 0.1544 | 0.054* | |
| H10B | 0.3842 | 1.1291 | 0.0764 | 0.054* | |
| H10C | 0.4972 | 1.1864 | 0.1508 | 0.054* | |
| C11 | 0.3130 (5) | 0.6760 (3) | 0.40038 (13) | 0.0225 (5) | |
| H11A | 0.3482 | 0.5562 | 0.4324 | 0.027* | |
| H11B | 0.1099 | 0.7050 | 0.3869 | 0.027* | |
| C12 | 0.3944 (5) | 0.8187 (3) | 0.44444 (13) | 0.0195 (5) | |
| C13 | 0.7336 (6) | 0.1752 (3) | 0.31692 (18) | 0.0360 (6) | |
| H13A | 0.5277 | 0.1920 | 0.3176 | 0.054* | |
| H13B | 0.8110 | 0.0538 | 0.3421 | 0.054* | |
| H13C | 0.7950 | 0.1908 | 0.2649 | 0.054* |
| S | 0.0300 (3) | 0.0185 (3) | 0.0271 (3) | −0.0028 (2) | −0.0065 (2) | −0.0025 (2) |
| O1 | 0.0275 (8) | 0.0163 (7) | 0.0230 (9) | −0.0025 (6) | 0.0001 (6) | −0.0039 (6) |
| O2 | 0.0275 (9) | 0.0214 (8) | 0.0334 (10) | −0.0003 (7) | −0.0053 (7) | −0.0105 (7) |
| O3 | 0.0251 (9) | 0.0248 (9) | 0.0370 (10) | −0.0017 (7) | −0.0069 (7) | −0.0140 (8) |
| C1 | 0.0254 (11) | 0.0162 (10) | 0.0241 (12) | −0.0044 (8) | −0.0027 (9) | −0.0063 (9) |
| C2 | 0.0256 (12) | 0.0200 (11) | 0.0263 (12) | −0.0079 (9) | −0.0025 (9) | −0.0066 (9) |
| C3 | 0.0267 (12) | 0.0261 (12) | 0.0297 (13) | −0.0068 (9) | 0.0006 (10) | −0.0084 (10) |
| C4 | 0.0334 (13) | 0.0314 (13) | 0.0289 (13) | −0.0150 (10) | 0.0057 (10) | −0.0125 (10) |
| C5 | 0.0418 (15) | 0.0292 (13) | 0.0235 (13) | −0.0155 (11) | 0.0006 (10) | −0.0024 (10) |
| C6 | 0.0366 (13) | 0.0209 (11) | 0.0281 (13) | −0.0092 (10) | −0.0021 (10) | −0.0051 (10) |
| C7 | 0.0280 (12) | 0.0209 (11) | 0.0227 (12) | −0.0074 (9) | −0.0006 (9) | −0.0066 (9) |
| C8 | 0.0256 (11) | 0.0170 (10) | 0.0223 (11) | −0.0066 (8) | −0.0045 (9) | −0.0045 (9) |
| C9 | 0.0449 (16) | 0.0437 (16) | 0.0368 (15) | −0.0173 (13) | 0.0140 (13) | −0.0125 (13) |
| C10 | 0.0480 (16) | 0.0247 (13) | 0.0318 (14) | −0.0035 (11) | −0.0049 (12) | 0.0031 (11) |
| C11 | 0.0252 (11) | 0.0191 (10) | 0.0253 (12) | −0.0074 (9) | 0.0000 (9) | −0.0059 (9) |
| C12 | 0.0218 (11) | 0.0188 (10) | 0.0193 (11) | −0.0071 (8) | 0.0025 (8) | −0.0035 (8) |
| C13 | 0.0439 (15) | 0.0200 (11) | 0.0452 (16) | −0.0068 (11) | −0.0132 (12) | −0.0066 (11) |
| S—C1 | 1.755 (2) | C5—H5 | 0.9300 |
| S—C13 | 1.808 (3) | C6—C7 | 1.384 (4) |
| O1—C8 | 1.379 (3) | C6—C10 | 1.503 (4) |
| O1—C7 | 1.380 (3) | C8—C11 | 1.484 (3) |
| O2—C12 | 1.215 (3) | C9—H9A | 0.9600 |
| O3—C12 | 1.316 (3) | C9—H9B | 0.9600 |
| O3—H3O | 0.73 (4) | C9—H9C | 0.9600 |
| C1—C8 | 1.351 (3) | C10—H10A | 0.9600 |
| C1—C2 | 1.443 (3) | C10—H10B | 0.9600 |
| C2—C7 | 1.393 (3) | C10—H10C | 0.9600 |
| C2—C3 | 1.394 (3) | C11—C12 | 1.514 (3) |
| C3—C4 | 1.389 (4) | C11—H11A | 0.9700 |
| C3—H3 | 0.9300 | C11—H11B | 0.9700 |
| C4—C5 | 1.410 (4) | C13—H13A | 0.9600 |
| C4—C9 | 1.509 (4) | C13—H13B | 0.9600 |
| C5—C6 | 1.390 (4) | C13—H13C | 0.9600 |
| C1—S—C13 | 100.58 (12) | C4—C9—H9A | 109.5 |
| C8—O1—C7 | 105.62 (18) | C4—C9—H9B | 109.5 |
| C12—O3—H3O | 109 (3) | H9A—C9—H9B | 109.5 |
| C8—C1—C2 | 106.3 (2) | C4—C9—H9C | 109.5 |
| C8—C1—S | 126.10 (19) | H9A—C9—H9C | 109.5 |
| C2—C1—S | 127.50 (18) | H9B—C9—H9C | 109.5 |
| C7—C2—C3 | 119.3 (2) | C6—C10—H10A | 109.5 |
| C7—C2—C1 | 105.7 (2) | C6—C10—H10B | 109.5 |
| C3—C2—C1 | 135.1 (2) | H10A—C10—H10B | 109.5 |
| C4—C3—C2 | 118.9 (2) | C6—C10—H10C | 109.5 |
| C4—C3—H3 | 120.6 | H10A—C10—H10C | 109.5 |
| C2—C3—H3 | 120.6 | H10B—C10—H10C | 109.5 |
| C3—C4—C5 | 119.3 (2) | C8—C11—C12 | 110.56 (18) |
| C3—C4—C9 | 120.6 (3) | C8—C11—H11A | 109.5 |
| C5—C4—C9 | 120.1 (2) | C12—C11—H11A | 109.5 |
| C6—C5—C4 | 123.5 (2) | C8—C11—H11B | 109.5 |
| C6—C5—H5 | 118.3 | C12—C11—H11B | 109.5 |
| C4—C5—H5 | 118.3 | H11A—C11—H11B | 108.1 |
| C7—C6—C5 | 114.6 (2) | O2—C12—O3 | 124.3 (2) |
| C7—C6—C10 | 122.1 (2) | O2—C12—C11 | 122.7 (2) |
| C5—C6—C10 | 123.3 (2) | O3—C12—C11 | 112.94 (19) |
| O1—C7—C6 | 125.3 (2) | S—C13—H13A | 109.5 |
| O1—C7—C2 | 110.3 (2) | S—C13—H13B | 109.5 |
| C6—C7—C2 | 124.4 (2) | H13A—C13—H13B | 109.5 |
| C1—C8—O1 | 112.1 (2) | S—C13—H13C | 109.5 |
| C1—C8—C11 | 132.8 (2) | H13A—C13—H13C | 109.5 |
| O1—C8—C11 | 115.00 (19) | H13B—C13—H13C | 109.5 |
| C13—S—C1—C8 | 110.5 (2) | C10—C6—C7—O1 | −0.8 (4) |
| C13—S—C1—C2 | −74.3 (2) | C5—C6—C7—C2 | 0.5 (3) |
| C8—C1—C2—C7 | 0.2 (2) | C10—C6—C7—C2 | −179.7 (2) |
| S—C1—C2—C7 | −175.77 (17) | C3—C2—C7—O1 | −178.87 (19) |
| C8—C1—C2—C3 | 179.0 (2) | C1—C2—C7—O1 | 0.2 (2) |
| S—C1—C2—C3 | 3.0 (4) | C3—C2—C7—C6 | 0.1 (3) |
| C7—C2—C3—C4 | −0.7 (3) | C1—C2—C7—C6 | 179.1 (2) |
| C1—C2—C3—C4 | −179.4 (2) | C2—C1—C8—O1 | −0.5 (2) |
| C2—C3—C4—C5 | 0.6 (3) | S—C1—C8—O1 | 175.57 (15) |
| C2—C3—C4—C9 | −179.7 (2) | C2—C1—C8—C11 | −177.8 (2) |
| C3—C4—C5—C6 | 0.0 (4) | S—C1—C8—C11 | −1.8 (4) |
| C9—C4—C5—C6 | −179.6 (2) | C7—O1—C8—C1 | 0.5 (2) |
| C4—C5—C6—C7 | −0.6 (4) | C7—O1—C8—C11 | 178.39 (17) |
| C4—C5—C6—C10 | 179.6 (2) | C1—C8—C11—C12 | 108.4 (3) |
| C8—O1—C7—C6 | −179.4 (2) | O1—C8—C11—C12 | −68.9 (2) |
| C8—O1—C7—C2 | −0.4 (2) | C8—C11—C12—O2 | 109.1 (2) |
| C5—C6—C7—O1 | 179.4 (2) | C8—C11—C12—O3 | −69.6 (2) |
| H··· | ||||
| O3—H3O···O2i | 0.73 (4) | 1.95 (4) | 2.680 (3) | 177 (4) |
| C9—H9A···Cgii | 0.96 | 2.72 | 3.621 (4) | 156 |
Hydrogen-bond geometry (Å, °)
Cg is the centroid of the C2–C7 ring.
| H⋯ | ||||
|---|---|---|---|---|
| O3—H3O⋯O2i | 0.73 (4) | 1.95 (4) | 2.680 (3) | 177 (4) |
| C9—H9 | 0.96 | 2.72 | 3.621 (4) | 156 |
Symmetry codes: (i) ; (ii) .