Literature DB >> 21203276

3,6-Bis(3,4,5-trimethoxy-phen-yl)-1,2,4-triazolo[3,4-b][1,3,4]thia-diazole.

Hai-Tang Du, Hai-Jun Du, Weiyi Zhou.   

Abstract

In the mol-ecule of the title compound, C(21)H(22)N(4)O(6)S, the planar central heterocyclic ring system is oriented with respect to the trimethoxy-phenyl rings at dihedral angles of 2.60 (5) and 3.60 (6)°. Intra-molecular C-H⋯N and C-H⋯S hydrogen bonds result in the formation of planar five- and six-membered rings. In the crystal structure, inter-molecular C-H⋯O hydrogen bonds link the mol-ecules. There is a C-H⋯π contact between a methyl group and a trimethoxy-phenyl ring, and a π-π contact between the central heterocyclic ring system and a trimethoxy-phenyl ring [centroid-centroid distance = 3.640 (1) Å].

Entities:  

Year:  2008        PMID: 21203276      PMCID: PMC2962044          DOI: 10.1107/S1600536808022502

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Karabasanagouda et al. (2007 ▶); Mathew et al. (2007 ▶).

Experimental

Crystal data

C21H22N4O6S M = 458.49 Triclinic, a = 8.6762 (17) Å b = 8.9289 (18) Å c = 13.735 (3) Å α = 94.50 (3)° β = 90.82 (3)° γ = 90.47 (3)° V = 1060.6 (4) Å3 Z = 2 Mo Kα radiation μ = 0.20 mm−1 T = 113 (2) K 0.22 × 0.20 × 0.10 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.957, T max = 0.980 6899 measured reflections 3720 independent reflections 3102 reflections with I > 2σ(I) R int = 0.022

Refinement

R[F 2 > 2σ(F 2)] = 0.044 wR(F 2) = 0.137 S = 1.19 3720 reflections 295 parameters H-atom parameters constrained Δρmax = 0.93 e Å−3 Δρmin = −0.56 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808022502/hk2498sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022502/hk2498Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C21H22N4O6SZ = 2
Mr = 458.49F000 = 480
Triclinic, P1Dx = 1.436 Mg m3
Hall symbol: -P 1Melting point: 423 K
a = 8.6762 (17) ÅMo Kα radiation λ = 0.71073 Å
b = 8.9289 (18) ÅCell parameters from 3022 reflections
c = 13.735 (3) Åθ = 2.8–27.9º
α = 94.50 (3)ºµ = 0.20 mm1
β = 90.82 (3)ºT = 113 (2) K
γ = 90.47 (3)ºPrism, colorless
V = 1060.6 (4) Å30.22 × 0.20 × 0.10 mm
Rigaku Saturn CCD area-detector diffractometer3720 independent reflections
Radiation source: rotating anode3102 reflections with I > 2σ(I)
Monochromator: confocalRint = 0.022
T = 113(2) Kθmax = 25.0º
ω scansθmin = 2.8º
Absorption correction: multi-scan(CrystalClear; Rigaku/MSC, 2005)h = −7→10
Tmin = 0.957, Tmax = 0.980k = −10→10
6899 measured reflectionsl = −15→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.044H-atom parameters constrained
wR(F2) = 0.137  w = 1/[σ2(Fo2) + (0.0797P)2 + 0.2575P] where P = (Fo2 + 2Fc2)/3
S = 1.19(Δ/σ)max = 0.003
3720 reflectionsΔρmax = 0.93 e Å3
295 parametersΔρmin = −0.55 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.50010 (6)0.76590 (6)0.89162 (4)0.01987 (19)
O1−0.04182 (18)0.27249 (17)1.14986 (12)0.0270 (4)
O2−0.17317 (18)0.40003 (18)1.31069 (12)0.0282 (4)
O3−0.09095 (19)0.67584 (18)1.38496 (11)0.0290 (4)
O40.6387 (2)0.3996 (2)0.57836 (12)0.0352 (4)
O50.5139 (3)0.1310 (2)0.59409 (12)0.0457 (5)
O60.3352 (2)0.07371 (18)0.74567 (12)0.0305 (4)
N10.2808 (2)0.88200 (19)1.13007 (13)0.0207 (4)
N20.3818 (2)0.9307 (2)1.06090 (13)0.0220 (4)
N30.31915 (19)0.69318 (18)1.02331 (12)0.0161 (4)
N40.3240 (2)0.56265 (19)0.96337 (12)0.0173 (4)
C10.1406 (2)0.6468 (2)1.16140 (15)0.0175 (4)
C20.1044 (2)0.5002 (2)1.12685 (15)0.0197 (5)
H20.14770.45831.06950.024*
C30.0031 (2)0.4170 (2)1.17875 (16)0.0204 (5)
C4−0.0631 (2)0.4788 (2)1.26440 (16)0.0209 (5)
C5−0.0226 (2)0.6260 (2)1.29933 (15)0.0205 (5)
C60.0775 (2)0.7102 (2)1.24824 (14)0.0193 (5)
H60.10290.80821.27130.023*
C70.0400 (3)0.1984 (3)1.07097 (18)0.0311 (6)
H7A0.02410.25051.01310.047*
H7B0.00290.09691.05960.047*
H7C0.14800.19811.08710.047*
C8−0.1128 (3)0.3006 (3)1.37736 (19)0.0356 (6)
H8A−0.04560.23001.34350.053*
H8B−0.19610.24751.40510.053*
H8C−0.05610.35721.42850.053*
C9−0.0618 (3)0.8283 (3)1.41985 (17)0.0354 (6)
H9A0.04690.84351.43080.053*
H9B−0.11520.85041.48000.053*
H9C−0.09760.89361.37220.053*
C100.2438 (2)0.7397 (2)1.10791 (15)0.0184 (5)
C110.4024 (2)0.8140 (2)0.99828 (15)0.0178 (4)
C120.4137 (2)0.5860 (2)0.89114 (15)0.0175 (4)
C130.4421 (2)0.4679 (2)0.81339 (15)0.0179 (5)
C140.5310 (2)0.4968 (3)0.73302 (15)0.0218 (5)
H140.57420.59160.72830.026*
C150.5545 (3)0.3832 (3)0.66039 (16)0.0260 (5)
C160.4910 (3)0.2408 (3)0.66800 (16)0.0285 (5)
C170.3990 (3)0.2149 (2)0.74754 (16)0.0233 (5)
C180.3746 (2)0.3271 (2)0.82064 (15)0.0201 (5)
H180.31400.30900.87390.024*
C190.6870 (3)0.5477 (3)0.56178 (19)0.0390 (6)
H19A0.59950.61310.56470.058*
H19B0.73250.54760.49850.058*
H19C0.76150.58270.61090.058*
C200.5942 (4)−0.0017 (3)0.6225 (2)0.0512 (8)
H20A0.64910.02230.68300.077*
H20B0.6657−0.03430.57270.077*
H20C0.5207−0.08060.63070.077*
C210.2401 (3)0.0431 (3)0.82573 (17)0.0280 (5)
H21A0.29910.05700.88550.042*
H21B0.2029−0.05870.81710.042*
H21C0.15430.11050.82860.042*
U11U22U33U12U13U23
S10.0218 (3)0.0164 (3)0.0217 (3)−0.0034 (2)0.0056 (2)0.0029 (2)
O10.0264 (9)0.0190 (8)0.0353 (9)−0.0065 (7)0.0089 (7)−0.0005 (7)
O20.0202 (8)0.0324 (9)0.0340 (9)−0.0024 (7)0.0086 (7)0.0152 (7)
O30.0334 (9)0.0306 (9)0.0232 (8)0.0000 (7)0.0118 (7)0.0019 (7)
O40.0383 (10)0.0439 (11)0.0231 (8)−0.0078 (8)0.0124 (7)−0.0015 (7)
O50.0724 (14)0.0362 (10)0.0262 (9)−0.0092 (10)0.0121 (9)−0.0138 (8)
O60.0376 (10)0.0214 (8)0.0315 (9)−0.0086 (7)0.0036 (7)−0.0039 (7)
N10.0232 (10)0.0171 (9)0.0219 (9)−0.0036 (7)0.0039 (8)0.0027 (7)
N20.0260 (10)0.0176 (9)0.0226 (9)−0.0041 (8)0.0069 (8)0.0029 (7)
N30.0166 (9)0.0137 (8)0.0181 (9)−0.0016 (7)0.0019 (7)0.0022 (7)
N40.0177 (9)0.0148 (9)0.0194 (9)−0.0006 (7)0.0010 (7)0.0013 (7)
C10.0142 (10)0.0191 (10)0.0197 (10)0.0005 (8)0.0003 (8)0.0049 (8)
C20.0172 (11)0.0219 (11)0.0203 (11)−0.0007 (9)0.0046 (9)0.0018 (9)
C30.0175 (11)0.0172 (10)0.0270 (11)−0.0017 (8)0.0006 (9)0.0044 (9)
C40.0152 (10)0.0232 (11)0.0256 (11)−0.0002 (8)0.0031 (9)0.0086 (9)
C50.0187 (11)0.0252 (12)0.0181 (10)0.0043 (9)0.0023 (9)0.0049 (9)
C60.0206 (11)0.0181 (10)0.0193 (11)0.0014 (9)−0.0008 (9)0.0025 (8)
C70.0317 (13)0.0234 (12)0.0373 (14)−0.0052 (10)0.0068 (11)−0.0041 (10)
C80.0365 (14)0.0379 (14)0.0351 (14)−0.0037 (11)0.0067 (11)0.0187 (11)
C90.0519 (17)0.0324 (14)0.0218 (12)0.0057 (12)0.0101 (11)−0.0018 (10)
C100.0184 (11)0.0192 (10)0.0177 (10)0.0007 (8)0.0004 (8)0.0018 (8)
C110.0174 (10)0.0161 (10)0.0205 (10)−0.0034 (8)0.0005 (8)0.0060 (8)
C120.0159 (10)0.0175 (10)0.0195 (10)0.0008 (8)−0.0010 (8)0.0049 (8)
C130.0155 (10)0.0203 (11)0.0181 (10)0.0007 (8)−0.0017 (8)0.0028 (8)
C140.0189 (11)0.0260 (11)0.0207 (11)−0.0031 (9)0.0001 (9)0.0034 (9)
C150.0228 (12)0.0371 (13)0.0179 (11)−0.0019 (10)0.0032 (9)0.0006 (9)
C160.0325 (13)0.0310 (13)0.0204 (11)−0.0034 (10)0.0021 (10)−0.0072 (10)
C170.0249 (12)0.0190 (11)0.0253 (12)−0.0028 (9)−0.0031 (9)−0.0020 (9)
C180.0181 (11)0.0227 (11)0.0198 (10)0.0006 (9)0.0003 (9)0.0025 (9)
C190.0391 (10)0.0433 (10)0.0349 (9)−0.0054 (8)0.0068 (8)0.0050 (8)
C200.0504 (11)0.0500 (11)0.0512 (11)0.0040 (9)0.0021 (9)−0.0090 (9)
C210.0274 (13)0.0211 (11)0.0357 (13)−0.0031 (10)−0.0010 (10)0.0035 (10)
S1—C111.729 (2)C6—H60.9300
S1—C121.766 (2)C7—H7A0.9600
O1—C31.372 (3)C7—H7B0.9600
O1—C71.426 (3)C7—H7C0.9600
O2—C41.374 (3)C8—H8A0.9600
O2—C81.422 (3)C8—H8B0.9600
O3—C51.369 (3)C8—H8C0.9600
O3—C91.427 (3)C9—H9A0.9600
O4—C151.369 (3)C9—H9B0.9600
O4—C191.420 (3)C9—H9C0.9600
O5—C161.372 (3)C12—C131.465 (3)
O5—C201.456 (4)C13—C181.394 (3)
O6—C171.371 (3)C13—C141.395 (3)
O6—C211.426 (3)C14—C151.384 (3)
N1—C101.319 (3)C14—H140.9300
N1—N21.394 (3)C15—C161.394 (3)
N2—C111.313 (3)C16—C171.395 (3)
N3—C111.363 (3)C17—C181.382 (3)
N3—N41.374 (2)C18—H180.9300
N3—C101.379 (3)C19—H19A0.9600
N4—C121.299 (3)C19—H19B0.9600
C1—C21.389 (3)C19—H19C0.9600
C1—C61.400 (3)C20—H20A0.9600
C1—C101.460 (3)C20—H20B0.9600
C2—C31.387 (3)C20—H20C0.9600
C2—H20.9300C21—H21A0.9600
C3—C41.393 (3)C21—H21B0.9600
C4—C51.403 (3)C21—H21C0.9600
C5—C61.380 (3)
C11—S1—C1287.61 (10)H9A—C9—H9C109.5
C3—O1—C7116.73 (17)H9B—C9—H9C109.5
C4—O2—C8114.35 (17)N1—C10—N3107.57 (18)
C5—O3—C9116.88 (18)N1—C10—C1127.0 (2)
C15—O4—C19116.8 (2)N3—C10—C1125.41 (19)
C16—O5—C20115.3 (2)N2—C11—N3110.97 (18)
C17—O6—C21116.75 (17)N2—C11—S1139.70 (16)
C10—N1—N2109.70 (17)N3—C11—S1109.32 (15)
C11—N2—N1105.61 (16)N4—C12—C13121.29 (19)
C11—N3—N4118.40 (17)N4—C12—S1116.85 (16)
C11—N3—C10106.15 (17)C13—C12—S1121.85 (16)
N4—N3—C10135.43 (17)C18—C13—C14120.9 (2)
C12—N4—N3107.81 (17)C18—C13—C12118.23 (19)
C2—C1—C6120.74 (19)C14—C13—C12120.9 (2)
C2—C1—C10121.14 (19)C15—C14—C13119.4 (2)
C6—C1—C10118.12 (19)C15—C14—H14120.3
C3—C2—C1119.3 (2)C13—C14—H14120.3
C3—C2—H2120.4O4—C15—C14124.2 (2)
C1—C2—H2120.4O4—C15—C16115.5 (2)
O1—C3—C2123.7 (2)C14—C15—C16120.3 (2)
O1—C3—C4115.37 (19)O5—C16—C15119.0 (2)
C2—C3—C4120.9 (2)O5—C16—C17121.3 (2)
O2—C4—C3120.4 (2)C15—C16—C17119.6 (2)
O2—C4—C5120.5 (2)O6—C17—C18124.0 (2)
C3—C4—C5118.98 (19)O6—C17—C16115.1 (2)
O3—C5—C6124.52 (19)C18—C17—C16120.8 (2)
O3—C5—C4114.81 (19)C17—C18—C13119.0 (2)
C6—C5—C4120.67 (19)C17—C18—H18120.5
C5—C6—C1119.37 (19)C13—C18—H18120.5
C5—C6—H6120.3O4—C19—H19A109.5
C1—C6—H6120.3O4—C19—H19B109.5
O1—C7—H7A109.5H19A—C19—H19B109.5
O1—C7—H7B109.5O4—C19—H19C109.5
H7A—C7—H7B109.5H19A—C19—H19C109.5
O1—C7—H7C109.5H19B—C19—H19C109.5
H7A—C7—H7C109.5O5—C20—H20A109.5
H7B—C7—H7C109.5O5—C20—H20B109.5
O2—C8—H8A109.5H20A—C20—H20B109.5
O2—C8—H8B109.5O5—C20—H20C109.5
H8A—C8—H8B109.5H20A—C20—H20C109.5
O2—C8—H8C109.5H20B—C20—H20C109.5
H8A—C8—H8C109.5O6—C21—H21A109.5
H8B—C8—H8C109.5O6—C21—H21B109.5
O3—C9—H9A109.5H21A—C21—H21B109.5
O3—C9—H9B109.5O6—C21—H21C109.5
H9A—C9—H9B109.5H21A—C21—H21C109.5
O3—C9—H9C109.5H21B—C21—H21C109.5
C10—N1—N2—C110.1 (2)N4—N3—C11—N2177.96 (17)
C11—N3—N4—C120.1 (2)C10—N3—C11—N2−0.6 (2)
C10—N3—N4—C12178.2 (2)N4—N3—C11—S1−0.9 (2)
C6—C1—C2—C30.8 (3)C10—N3—C11—S1−179.49 (13)
C10—C1—C2—C3−178.50 (19)C12—S1—C11—N2−177.3 (3)
C7—O1—C3—C210.3 (3)C12—S1—C11—N31.03 (15)
C7—O1—C3—C4−171.13 (19)N3—N4—C12—C13−179.48 (17)
C1—C2—C3—O1178.88 (19)N3—N4—C12—S10.8 (2)
C1—C2—C3—C40.4 (3)C11—S1—C12—N4−1.12 (17)
C8—O2—C4—C386.6 (3)C11—S1—C12—C13179.16 (18)
C8—O2—C4—C5−97.3 (2)N4—C12—C13—C18−2.4 (3)
O1—C3—C4—O2−4.2 (3)S1—C12—C13—C18177.34 (15)
C2—C3—C4—O2174.44 (19)N4—C12—C13—C14176.02 (19)
O1—C3—C4—C5179.64 (19)S1—C12—C13—C14−4.3 (3)
C2—C3—C4—C5−1.7 (3)C18—C13—C14—C15−1.1 (3)
C9—O3—C5—C63.6 (3)C12—C13—C14—C15−179.42 (19)
C9—O3—C5—C4−175.7 (2)C19—O4—C15—C14−8.6 (3)
O2—C4—C5—O35.2 (3)C19—O4—C15—C16171.6 (2)
C3—C4—C5—O3−178.67 (18)C13—C14—C15—O4179.6 (2)
O2—C4—C5—C6−174.19 (18)C13—C14—C15—C16−0.6 (3)
C3—C4—C5—C62.0 (3)C20—O5—C16—C15119.7 (3)
O3—C5—C6—C1179.86 (19)C20—O5—C16—C17−63.8 (3)
C4—C5—C6—C1−0.9 (3)O4—C15—C16—O5−1.3 (3)
C2—C1—C6—C5−0.5 (3)C14—C15—C16—O5178.9 (2)
C10—C1—C6—C5178.77 (18)O4—C15—C16—C17−177.9 (2)
N2—N1—C10—N3−0.4 (2)C14—C15—C16—C172.3 (4)
N2—N1—C10—C1−179.76 (19)C21—O6—C17—C18−1.0 (3)
C11—N3—C10—N10.6 (2)C21—O6—C17—C16−179.9 (2)
N4—N3—C10—N1−177.6 (2)O5—C16—C17—O60.1 (3)
C11—N3—C10—C1179.98 (19)C15—C16—C17—O6176.6 (2)
N4—N3—C10—C11.7 (4)O5—C16—C17—C18−178.8 (2)
C2—C1—C10—N1176.3 (2)C15—C16—C17—C18−2.3 (4)
C6—C1—C10—N1−3.1 (3)O6—C17—C18—C13−178.1 (2)
C2—C1—C10—N3−2.9 (3)C16—C17—C18—C130.7 (3)
C6—C1—C10—N3177.75 (18)C14—C13—C18—C171.1 (3)
N1—N2—C11—N30.4 (2)C12—C13—C18—C17179.43 (19)
N1—N2—C11—S1178.7 (2)
D—H···AD—HH···AD···AD—H···A
C2—H2···N40.932.363.047 (3)130
C14—H14···S10.932.723.130 (3)108
C19—H19B···O3i0.962.533.384 (2)148
C21—H21B···O1ii0.962.433.331 (3)156
C19—H19C···Cg3iii0.963.304.057 (3)137
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯N40.932.363.047 (3)130
C14—H14⋯S10.932.723.130 (3)108
C19—H19B⋯O3i0.962.533.384 (2)148
C21—H21B⋯O1ii0.962.433.331 (3)156
C19—H19CCg3iii0.963.304.057 (3)137

Symmetry codes: (i) ; (ii) ; (iii) . Cg3 is the centroid of the trimethoxyphenyl ring C1–C6.

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Studies on synthesis and pharmacological activities of 3,6-disubstituted-1,2,4-triazolo[3,4-b]-1,3,4-thiadiazoles and their dihydro analogues.

Authors:  Vinod Mathew; J Keshavayya; V P Vaidya; D Giles
Journal:  Eur J Med Chem       Date:  2007-01-09       Impact factor: 6.514

3.  Synthesis and antimicrobial activities of some novel 1,2,4-triazolo[3,4-b]-1,3,4-thiadiazoles and 1,2,4-triazolo[3,4-b]-1,3,4-thiadiazines carrying thioalkyl and sulphonyl phenoxy moieties.

Authors:  T Karabasanagouda; Airody Vasudeva Adhikari; N Suchetha Shetty
Journal:  Eur J Med Chem       Date:  2006-12-06       Impact factor: 6.514

  3 in total
  1 in total

1.  Structural and Energetic Properties of Weak Noncovalent Interactions in Two Closely Related 3,6-Disubstituted-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazole Derivatives: In Vitro Cyclooxygenase Activity, Crystallography, and Computational Investigations.

Authors:  Lamya H Al-Wahaibi; Sekar Karthikeyan; Olivier Blacque; Amal A El-Masry; Hanan M Hassan; M Judith Percino; Ali A El-Emam; Subbiah Thamotharan
Journal:  ACS Omega       Date:  2022-09-16
  1 in total

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