Literature DB >> 21203264

3,3'-(Butane-1,4-di-yl)diimidazole-1,1'-diium bis-(triiodide).

Ai-E Shi1, Ying-Hui Yu, Guang-Feng Hou, Jin-Sheng Gao.   

Abstract

The cations and anions of the salt, C(10)H(16)N(4) (2+)·2I(3) (-), are linked by N-H⋯I hydrogen bonds and π-π stacking inter-actions(with interplanar distances of 3.575 and 3.528 Å) into a three-dimensional supra-molecular network. The asymmetric unit contains two anions and two half-cations; each cation is centrosymmetric.

Entities:  

Year:  2008        PMID: 21203264      PMCID: PMC2962153          DOI: 10.1107/S1600536808022393

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For literature on 1,1′-(1,4-butanedi­yl)diimidazole, see: Ma et al. (2003 ▶). For the structure of another 1,1′-(1,4-butanedi­yl)diimidazole-3,3′-diium salt, see: Yu et al. (2008 ▶).

Experimental

Crystal data

C10H16N4 2+·2I3 − M = 953.67 Triclinic, a = 8.4753 (17) Å b = 9.7177 (19) Å c = 14.110 (3) Å α = 95.77 (3)° β = 92.82 (3)° γ = 107.17 (3)° V = 1100.9 (4) Å3 Z = 2 Mo Kα radiation μ = 8.46 mm−1 T = 291 (2) K 0.21 × 0.20 × 0.18 mm

Data collection

Rigaku R-AXIS RAPID diffractometer Absorption correction: multi-scan (ABSCOR; Higashi, 1995 ▶) T min = 0.266, T max = 0.306 (expected range = 0.189–0.218) 8492 measured reflections 3831 independent reflections 3045 reflections with I > 2σ(I) R int = 0.030

Refinement

R[F 2 > 2σ(F 2)] = 0.035 wR(F 2) = 0.087 S = 1.10 3831 reflections 178 parameters H-atom parameters constrained Δρmax = 1.19 e Å−3 Δρmin = −0.86 e Å−3 Data collection: RAPID-AUTO (Rigaku, 1998 ▶); cell refinement: RAPID-AUTO; data reduction: CrystalStructure (Rigaku/MSC, 2002 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808022393/ng2463sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022393/ng2463Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C10H16N42+·2I3Z = 2
Mr = 953.67F000 = 844
Triclinic, P1Dx = 2.877 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71073 Å
a = 8.4753 (17) ÅCell parameters from 7434 reflections
b = 9.7177 (19) Åθ = 3.0–27.5º
c = 14.110 (3) ŵ = 8.46 mm1
α = 95.77 (3)ºT = 291 (2) K
β = 92.82 (3)ºBlock, yellow
γ = 107.17 (3)º0.21 × 0.20 × 0.18 mm
V = 1100.9 (4) Å3
Rigaku R-AXIS RAPID diffractometer3831 independent reflections
Radiation source: fine-focus sealed tube3045 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.031
T = 291(2) Kθmax = 25.0º
ω scansθmin = 3.0º
Absorption correction: multi-scan(ABSCOR; Higashi, 1995)h = −10→10
Tmin = 0.266, Tmax = 0.307k = −11→11
8492 measured reflectionsl = −16→16
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.035H-atom parameters constrained
wR(F2) = 0.087  w = 1/[σ2(Fo2) + (0.0254P)2 + 5.2161P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
3831 reflectionsΔρmax = 1.19 e Å3
178 parametersΔρmin = −0.86 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.6046 (11)0.3684 (10)0.5506 (6)0.049 (2)
H10.71420.38300.53690.058*
C20.5511 (12)0.4469 (11)0.6176 (7)0.055 (2)
H20.61590.52680.65850.066*
C30.3377 (12)0.2777 (12)0.5469 (7)0.056 (2)
H40.22930.21910.53050.067*
C40.4772 (13)0.1552 (11)0.4282 (6)0.057 (3)
H60.54580.20280.38080.069*
H50.36640.10900.39770.069*
C50.5466 (12)0.0400 (11)0.4628 (7)0.062 (3)
H80.5474−0.02930.40850.075*
H70.66050.08600.48840.075*
C61.0068 (12)0.3316 (11)0.1048 (7)0.055 (2)
H90.93620.29150.14990.066*
C71.1312 (11)0.4573 (11)0.1195 (8)0.057 (3)
H101.16360.52080.17580.068*
C81.1230 (13)0.3611 (11)−0.0302 (7)0.056 (3)
H121.14900.3477−0.09300.067*
C90.8858 (8)0.1352 (8)−0.0341 (6)0.055 (2)
H130.89750.1278−0.10230.066*
H140.77340.1358−0.02470.066*
C100.9139 (8)0.0029 (8)0.0049 (6)0.079 (4)
H150.89230.00550.07180.094*
H160.8364−0.0844−0.02930.094*
I10.55146 (9)0.37444 (7)0.15451 (5)0.05732 (19)
I20.54230 (7)0.06704 (6)0.16015 (4)0.04222 (15)
I30.53942 (8)−0.22804 (7)0.16387 (5)0.0602 (2)
I40.96410 (8)0.34498 (8)0.37380 (5)0.0608 (2)
I50.99004 (7)0.05335 (7)0.33765 (4)0.05118 (17)
I61.03499 (9)−0.23842 (8)0.31071 (5)0.0636 (2)
N11.0024 (9)0.2733 (8)0.0121 (5)0.0471 (18)
N21.1981 (10)0.4712 (9)0.0356 (6)0.060 (2)
H111.29060.52580.02110.072*
N30.4708 (8)0.2639 (8)0.5063 (5)0.0443 (17)
N40.3853 (10)0.3886 (9)0.6146 (6)0.058 (2)
H30.31110.40940.64800.070*
U11U22U33U12U13U23
C10.039 (5)0.053 (6)0.048 (5)0.005 (4)0.007 (4)0.002 (5)
C20.054 (6)0.052 (6)0.049 (6)0.006 (5)−0.003 (5)−0.002 (5)
C30.050 (6)0.068 (7)0.052 (6)0.021 (5)0.009 (5)0.007 (5)
C40.062 (6)0.074 (7)0.038 (5)0.027 (6)0.005 (5)−0.001 (5)
C50.060 (6)0.063 (7)0.067 (7)0.023 (6)0.017 (5)0.002 (5)
C60.052 (6)0.067 (7)0.049 (6)0.026 (6)0.004 (5)−0.003 (5)
C70.039 (5)0.049 (6)0.072 (7)0.005 (5)−0.010 (5)−0.012 (5)
C80.067 (6)0.061 (7)0.050 (6)0.034 (6)0.006 (5)0.011 (5)
C90.051 (5)0.045 (6)0.060 (6)0.003 (5)−0.006 (5)0.006 (5)
C100.056 (6)0.037 (6)0.121 (10)−0.018 (5)−0.001 (7)0.009 (6)
I10.0714 (4)0.0472 (4)0.0598 (4)0.0265 (3)0.0108 (3)0.0079 (3)
I20.0397 (3)0.0447 (3)0.0383 (3)0.0090 (3)0.0015 (2)−0.0012 (2)
I30.0601 (4)0.0393 (4)0.0767 (5)0.0106 (3)−0.0034 (3)0.0040 (3)
I40.0584 (4)0.0562 (4)0.0616 (4)0.0098 (3)0.0076 (3)−0.0007 (3)
I50.0415 (3)0.0630 (4)0.0443 (3)0.0107 (3)−0.0010 (3)0.0020 (3)
I60.0660 (4)0.0729 (5)0.0604 (4)0.0338 (4)0.0089 (3)0.0062 (4)
N10.051 (4)0.048 (5)0.049 (5)0.022 (4)0.004 (4)0.014 (4)
N20.049 (5)0.061 (6)0.075 (6)0.024 (4)0.006 (5)0.017 (5)
N30.040 (4)0.048 (5)0.043 (4)0.009 (4)0.003 (3)0.008 (3)
N40.054 (5)0.065 (6)0.055 (5)0.015 (4)0.015 (4)0.004 (4)
C1—C21.335 (13)C7—N21.340 (13)
C1—N31.354 (11)C7—H100.9300
C1—H10.9300C8—N11.332 (12)
C2—N41.348 (12)C8—N21.324 (12)
C2—H20.9300C8—H120.9300
C3—N41.317 (12)C9—N11.477 (10)
C3—N31.326 (11)C9—C101.5246
C3—H40.9300C9—H130.9700
C4—N31.462 (11)C9—H140.9700
C4—C51.519 (13)C10—C10ii1.489
C4—H60.9700C10—H150.9700
C4—H50.9700C10—H160.9700
C5—C5i1.487 (19)I1—I22.9745 (10)
C5—H80.9700I2—I32.8662 (10)
C5—H70.9700I4—I52.9031 (11)
C6—C71.347 (13)I5—I62.9604 (11)
C6—N11.367 (11)N2—H110.8544
C6—H90.9300N4—H30.8628
C2—C1—N3107.7 (8)N1—C8—H12127.1
C2—C1—H1126.2N2—C8—H12127.1
N3—C1—H1126.2N1—C9—C10112.9
C1—C2—N4107.1 (9)N1—C9—H13109.0
C1—C2—H2126.5C10—C9—H13109.0
N4—C2—H2126.5N1—C9—H14109.0
N4—C3—N3108.2 (9)C10—C9—H14109.0
N4—C3—H4125.9H13—C9—H14107.8
N3—C3—H4125.9C10ii—C10—C9112.0 (5)
N3—C4—C5112.1 (8)C10ii—C10—H15109.2
N3—C4—H6109.2C9—C10—H15109.2
C5—C4—H6109.2C10ii—C10—H16109.2
N3—C4—H5109.2C9—C10—H16109.2
C5—C4—H5109.2H15—C10—H16107.9
H6—C4—H5107.9I3—I2—I1178.89 (3)
C5i—C5—C4114.5 (10)I4—I5—I6176.21 (3)
C5i—C5—H8108.6C8—N1—C6108.7 (9)
C4—C5—H8108.6C8—N1—C9125.1 (8)
C5i—C5—H7108.6C6—N1—C9126.2 (8)
C4—C5—H7108.6C8—N2—C7112.3 (9)
H8—C5—H7107.6C8—N2—H11114.7
C7—C6—N1108.1 (9)C7—N2—H11131.3
C7—C6—H9125.9C3—N3—C1108.0 (8)
N1—C6—H9125.9C3—N3—C4127.3 (8)
C6—C7—N2105.0 (9)C1—N3—C4124.6 (7)
C6—C7—H10127.5C3—N4—C2109.0 (8)
N2—C7—H10127.5C3—N4—H3118.4
N1—C8—N2105.9 (9)C2—N4—H3132.6
D—H···AD—HH···AD···AD—H···A
N2—H11···I3iii0.853.143.690 (9)124
N2—H11···I1iv0.852.993.666 (9)138
N4—H3···I1v0.863.253.714 (9)116
N4—H3···I6i0.863.033.679 (8)134
C6—H9···I40.933.133.823 (10)132
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H11⋯I3i0.853.143.690 (9)124
N2—H11⋯I1ii0.852.993.666 (9)138
N4—H3⋯I1iii0.863.253.714 (9)116
N4—H3⋯I6iv0.863.033.679 (8)134

Symmetry codes: (i) ; (ii) ; (iii) , ; (iv) .

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