| Literature DB >> 21203174 |
Abstract
The title compound, C(10)H(13)N(2)O(4) (+)·Cl(-), comprises a Cl(-) anion and a protonated aminium cation. The crystal packing is stabilized by cation-anion N-H⋯Cl hydrogen bonds and N-H⋯O hydrogen bonds, building an infinite two-dimensional network parallel to the (001) plane. The S absolute configuration at the chiral center was deduced from the synthetic pathway and confirmed by the X-ray analysis.Entities:
Year: 2008 PMID: 21203174 PMCID: PMC2962090 DOI: 10.1107/S1600536808020874
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C10H13N2O4+·Cl– | |
| Monoclinic, | Mo |
| Hall symbol: P 2yb | Cell parameters from 1445 reflections |
| θ = 2.4–27.5º | |
| µ = 0.32 mm−1 | |
| β = 95.64 (4)º | Block, colourless |
| 0.25 × 0.18 × 0.17 mm | |
| Rigaku Mercury2 diffractometer | 2751 independent reflections |
| Radiation source: fine-focus sealed tube | 2077 reflections with |
| Monochromator: graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.4º |
| θmin = 2.7º | |
| ω scans | |
| Absorption correction: multi-scan(CrystalClear; Rigaku, 2005) | |
| 6215 measured reflections |
| Refinement on | Hydrogen site location: inferred from neighbouring sites |
| Least-squares matrix: full | H-atom parameters constrained |
| | |
| (Δ/σ)max < 0.001 | |
| Δρmax = 0.30 e Å−3 | |
| 2751 reflections | Δρmin = −0.17 e Å−3 |
| 154 parameters | Extinction correction: none |
| 1 restraint | Absolute structure: Flack (1983), 1259 Friedel pairs |
| Primary atom site location: structure-invariant direct methods | Flack parameter: −0.03 (9) |
| Secondary atom site location: difference Fourier map |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| Cl1 | 0.98552 (15) | 0.75535 (11) | 0.54873 (5) | 0.0499 (2) | |
| O3 | 0.8079 (4) | 0.7690 (3) | 0.30131 (12) | 0.0483 (5) | |
| C9 | 0.6109 (5) | 0.7495 (4) | 0.35535 (16) | 0.0362 (6) | |
| O4 | 0.4684 (5) | 0.8525 (3) | 0.38126 (14) | 0.0498 (6) | |
| C8 | 0.5762 (6) | 0.5766 (3) | 0.37686 (18) | 0.0353 (6) | |
| H8A | 0.7584 | 0.5243 | 0.3803 | 0.042* | |
| N2 | 0.4629 (6) | 0.5646 (3) | 0.46458 (15) | 0.0448 (6) | |
| H11A | 0.5788 | 0.6120 | 0.5058 | 0.067* | |
| H11B | 0.4447 | 0.4629 | 0.4787 | 0.067* | |
| H11C | 0.2973 | 0.6119 | 0.4617 | 0.067* | |
| C4 | 0.4967 (6) | 0.4821 (4) | 0.21766 (19) | 0.0400 (7) | |
| C7 | 0.3780 (7) | 0.4943 (4) | 0.3058 (2) | 0.0439 (7) | |
| H7A | 0.3369 | 0.3885 | 0.3262 | 0.053* | |
| H7B | 0.2044 | 0.5530 | 0.2980 | 0.053* | |
| C1 | 0.7171 (8) | 0.4557 (4) | 0.0577 (2) | 0.0493 (8) | |
| C2 | 0.8081 (8) | 0.3560 (5) | 0.1245 (2) | 0.0576 (9) | |
| H2C | 0.9440 | 0.2805 | 0.1165 | 0.069* | |
| C3 | 0.6962 (7) | 0.3682 (4) | 0.2046 (2) | 0.0512 (8) | |
| H3A | 0.7551 | 0.2991 | 0.2506 | 0.061* | |
| C5 | 0.4107 (7) | 0.5812 (4) | 0.1485 (2) | 0.0530 (9) | |
| H5A | 0.2761 | 0.6576 | 0.1561 | 0.064* | |
| C6 | 0.5198 (8) | 0.5697 (5) | 0.0674 (2) | 0.0612 (10) | |
| H6A | 0.4609 | 0.6375 | 0.0207 | 0.073* | |
| N1 | 0.8330 (9) | 0.4439 (5) | −0.0288 (2) | 0.0722 (10) | |
| O1 | 1.0166 (8) | 0.3463 (5) | −0.0366 (2) | 0.1027 (12) | |
| O2 | 0.7365 (9) | 0.5296 (5) | −0.0890 (2) | 0.1057 (12) | |
| C10 | 0.8487 (10) | 0.9318 (4) | 0.2717 (3) | 0.0691 (11) | |
| H10A | 0.9951 | 0.9340 | 0.2331 | 0.104* | |
| H10B | 0.8984 | 0.9983 | 0.3224 | 0.104* | |
| H10C | 0.6794 | 0.9702 | 0.2402 | 0.104* |
| Cl1 | 0.0520 (4) | 0.0476 (4) | 0.0505 (4) | 0.0037 (4) | 0.0075 (3) | −0.0092 (4) |
| O3 | 0.0588 (12) | 0.0420 (12) | 0.0475 (11) | −0.0084 (12) | 0.0217 (10) | 0.0009 (12) |
| C9 | 0.0410 (14) | 0.0359 (14) | 0.0315 (12) | −0.0017 (16) | 0.0027 (11) | −0.0029 (15) |
| O4 | 0.0582 (14) | 0.0403 (12) | 0.0521 (13) | 0.0093 (11) | 0.0123 (11) | 0.0021 (11) |
| C8 | 0.0429 (16) | 0.0342 (15) | 0.0303 (14) | 0.0008 (13) | 0.0109 (12) | 0.0018 (12) |
| N2 | 0.0599 (17) | 0.0372 (14) | 0.0390 (14) | −0.0001 (13) | 0.0135 (12) | 0.0005 (12) |
| C4 | 0.0466 (17) | 0.0353 (15) | 0.0389 (16) | −0.0111 (13) | 0.0074 (14) | −0.0071 (13) |
| C7 | 0.0428 (17) | 0.0444 (18) | 0.0460 (17) | −0.0076 (14) | 0.0114 (14) | −0.0031 (15) |
| C1 | 0.058 (2) | 0.056 (2) | 0.0364 (17) | −0.0125 (17) | 0.0129 (15) | −0.0138 (15) |
| C2 | 0.060 (2) | 0.062 (2) | 0.052 (2) | 0.0040 (19) | 0.0099 (17) | −0.0160 (19) |
| C3 | 0.067 (2) | 0.0434 (18) | 0.0431 (18) | −0.0007 (17) | 0.0073 (16) | −0.0024 (15) |
| C5 | 0.060 (2) | 0.053 (2) | 0.0465 (19) | 0.0070 (17) | 0.0083 (16) | 0.0000 (17) |
| C6 | 0.078 (3) | 0.064 (2) | 0.0403 (19) | −0.006 (2) | 0.0023 (18) | 0.0038 (18) |
| N1 | 0.085 (3) | 0.089 (3) | 0.0451 (19) | −0.023 (2) | 0.0180 (17) | −0.021 (2) |
| O1 | 0.094 (2) | 0.141 (3) | 0.078 (2) | 0.008 (2) | 0.0345 (19) | −0.035 (2) |
| O2 | 0.155 (3) | 0.121 (3) | 0.0465 (16) | −0.005 (3) | 0.0353 (19) | 0.0011 (19) |
| C10 | 0.090 (3) | 0.052 (2) | 0.068 (2) | −0.011 (2) | 0.022 (2) | 0.013 (2) |
| O3—C9 | 1.323 (3) | C1—C2 | 1.353 (5) |
| O3—C10 | 1.462 (4) | C1—C6 | 1.371 (5) |
| C9—O4 | 1.196 (4) | C1—N1 | 1.475 (4) |
| C9—C8 | 1.506 (4) | C2—C3 | 1.377 (4) |
| C8—N2 | 1.486 (3) | C2—H2C | 0.9300 |
| C8—C7 | 1.532 (4) | C3—H3A | 0.9300 |
| C8—H8A | 0.9800 | C5—C6 | 1.384 (5) |
| N2—H11A | 0.8900 | C5—H5A | 0.9300 |
| N2—H11B | 0.8900 | C6—H6A | 0.9300 |
| N2—H11C | 0.8900 | N1—O2 | 1.217 (5) |
| C4—C5 | 1.370 (4) | N1—O1 | 1.223 (5) |
| C4—C3 | 1.387 (5) | C10—H10A | 0.9600 |
| C4—C7 | 1.505 (4) | C10—H10B | 0.9600 |
| C7—H7A | 0.9700 | C10—H10C | 0.9600 |
| C7—H7B | 0.9700 | ||
| C9—O3—C10 | 115.6 (3) | C2—C1—C6 | 122.2 (3) |
| O4—C9—O3 | 125.7 (3) | C2—C1—N1 | 119.8 (4) |
| O4—C9—C8 | 123.5 (3) | C6—C1—N1 | 118.0 (4) |
| O3—C9—C8 | 110.8 (3) | C1—C2—C3 | 118.9 (3) |
| N2—C8—C9 | 108.4 (2) | C1—C2—H2C | 120.6 |
| N2—C8—C7 | 109.6 (2) | C3—C2—H2C | 120.6 |
| C9—C8—C7 | 111.2 (2) | C2—C3—C4 | 121.0 (3) |
| N2—C8—H8A | 109.2 | C2—C3—H3A | 119.5 |
| C9—C8—H8A | 109.2 | C4—C3—H3A | 119.5 |
| C7—C8—H8A | 109.2 | C4—C5—C6 | 121.4 (3) |
| C8—N2—H11A | 109.5 | C4—C5—H5A | 119.3 |
| C8—N2—H11B | 109.5 | C6—C5—H5A | 119.3 |
| H11A—N2—H11B | 109.5 | C1—C6—C5 | 118.2 (3) |
| C8—N2—H11C | 109.5 | C1—C6—H6A | 120.9 |
| H11A—N2—H11C | 109.5 | C5—C6—H6A | 120.9 |
| H11B—N2—H11C | 109.5 | O2—N1—O1 | 123.7 (4) |
| C5—C4—C3 | 118.4 (3) | O2—N1—C1 | 118.1 (4) |
| C5—C4—C7 | 121.4 (3) | O1—N1—C1 | 118.2 (4) |
| C3—C4—C7 | 120.2 (3) | O3—C10—H10A | 109.5 |
| C4—C7—C8 | 112.7 (3) | O3—C10—H10B | 109.5 |
| C4—C7—H7A | 109.1 | H10A—C10—H10B | 109.5 |
| C8—C7—H7A | 109.1 | O3—C10—H10C | 109.5 |
| C4—C7—H7B | 109.1 | H10A—C10—H10C | 109.5 |
| C8—C7—H7B | 109.1 | H10B—C10—H10C | 109.5 |
| H7A—C7—H7B | 107.8 | ||
| C10—O3—C9—O4 | −0.3 (4) | C1—C2—C3—C4 | −1.1 (5) |
| C10—O3—C9—C8 | 176.6 (3) | C5—C4—C3—C2 | 0.9 (5) |
| O4—C9—C8—N2 | −29.2 (4) | C7—C4—C3—C2 | −179.7 (3) |
| O3—C9—C8—N2 | 153.9 (2) | C3—C4—C5—C6 | −0.4 (5) |
| O4—C9—C8—C7 | 91.4 (3) | C7—C4—C5—C6 | −179.9 (3) |
| O3—C9—C8—C7 | −85.5 (3) | C2—C1—C6—C5 | −0.4 (6) |
| C5—C4—C7—C8 | −103.2 (4) | N1—C1—C6—C5 | −180.0 (3) |
| C3—C4—C7—C8 | 77.3 (4) | C4—C5—C6—C1 | 0.2 (5) |
| N2—C8—C7—C4 | −172.3 (2) | C2—C1—N1—O2 | 176.2 (4) |
| C9—C8—C7—C4 | 67.8 (3) | C6—C1—N1—O2 | −4.2 (5) |
| C6—C1—C2—C3 | 0.8 (6) | C2—C1—N1—O1 | −2.3 (5) |
| N1—C1—C2—C3 | −179.6 (3) | C6—C1—N1—O1 | 177.3 (4) |
| H··· | ||||
| N2—H11B···O4i | 0.89 | 2.31 | 2.929 (4) | 127 |
| N2—H11B···Cl1i | 0.89 | 2.71 | 3.380 (3) | 133 |
| N2—H11C···Cl1ii | 0.89 | 2.42 | 3.175 (3) | 143 |
| N2—H11A···Cl1 | 0.89 | 2.34 | 3.151 (3) | 151 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N2—H11 | 0.89 | 2.31 | 2.929 (4) | 127 |
| N2—H11 | 0.89 | 2.71 | 3.380 (3) | 133 |
| N2—H11 | 0.89 | 2.42 | 3.175 (3) | 143 |
| N2—H11 | 0.89 | 2.34 | 3.151 (3) | 151 |
Symmetry codes: (i) ; (ii) .