Literature DB >> 21203162

A monoclinic polymorph of N,N'-bis-(2,6-diisopropyl-phen-yl)formamidine.

Jason D Masuda1.   

Abstract

A new polymorph of N,N'-bis-(2,6-diisopropyl-phen-yl)formamidine, C(25)H(36)N(2), is reported, which is different from the previously reported ortho-rhom-bic structure. The mol-ecule crystallizes in the E-anti configuration, with tautomeric disorder of the N-bonded H atoms and no clear distinction between imine and amine functionalities. The mol-ecules form hydrogen-bonded dimers with inter-molecular N⋯N distances shorter than those in the ortho-rhom-bic polymorph.

Entities:  

Year:  2008        PMID: 21203162      PMCID: PMC2962078          DOI: 10.1107/S160053680802076X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the ortho­rhom­bic polymorph, see: Stibrany & Potenza (2006 ▶). For synthetic details and related literature, see: Krahulic et al. (2005 ▶); Perrin (1991 ▶).

Experimental

Crystal data

C25H36N2 M = 364.56 Monoclinic, a = 24.169 (4) Å b = 12.7881 (18) Å c = 19.479 (3) Å β = 126.735 (2)° V = 4824.8 (12) Å3 Z = 8 Mo Kα radiation μ = 0.06 mm−1 T = 291 (2) K 0.45 × 0.34 × 0.30 mm

Data collection

Bruker SMART 1K CCD diffractometer Absorption correction: none 12048 measured reflections 4242 independent reflections 2237 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.051 wR(F 2) = 0.161 S = 1.02 4242 reflections 252 parameters H-atom parameters constrained Δρmax = 0.18 e Å−3 Δρmin = −0.17 e Å−3 Data collection: SMART (Bruker, 2003 ▶); cell refinement: SAINT (Bruker, 2003 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶); software used to prepare material for publication: publCIF (Westrip, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680802076X/bi2287sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680802076X/bi2287Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C25H36N2F000 = 1600
Mr = 364.56Dx = 1.004 Mg m3
Monoclinic, C2/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -C 2ycCell parameters from 2205 reflections
a = 24.169 (4) Åθ = 2.6–21.8º
b = 12.7881 (18) ŵ = 0.06 mm1
c = 19.479 (3) ÅT = 291 (2) K
β = 126.735 (2)ºBlock, colourless
V = 4824.8 (12) Å30.45 × 0.34 × 0.30 mm
Z = 8
Bruker SMART 1K CCD diffractometer2237 reflections with I > 2σ(I)
Radiation source: fine-focus sealed tubeRint = 0.036
Monochromator: graphiteθmax = 25.0º
T = 291(2) Kθmin = 2.1º
φ and ω scansh = −28→28
Absorption correction: nonek = −7→15
12048 measured reflectionsl = −23→23
4242 independent reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.051H-atom parameters constrained
wR(F2) = 0.161  w = 1/[σ2(Fo2) + (0.065P)2 + 2.1873P] where P = (Fo2 + 2Fc2)/3
S = 1.02(Δ/σ)max < 0.001
4242 reflectionsΔρmax = 0.18 e Å3
252 parametersΔρmin = −0.17 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/UeqOcc. (<1)
N20.02590 (9)0.18752 (13)0.69910 (11)0.0465 (5)
H2A0.01130.19190.72990.056*0.50
N10.00186 (10)0.01071 (13)0.67743 (12)0.0502 (5)
H1A−0.00420.00870.71670.060*0.50
C2−0.00791 (13)−0.08218 (17)0.63024 (16)0.0509 (6)
C10.01996 (11)0.09893 (17)0.66139 (14)0.0468 (6)
H10.02900.09850.62120.056*
C140.05632 (11)0.27673 (17)0.68974 (14)0.0463 (6)
C150.01510 (13)0.36571 (18)0.64789 (15)0.0554 (6)
C190.12706 (12)0.27631 (19)0.72640 (16)0.0569 (6)
C70.03995 (14)−0.16434 (18)0.67252 (17)0.0607 (7)
C3−0.06573 (14)−0.0910 (2)0.54441 (16)0.0612 (7)
C110.10007 (15)−0.1590 (2)0.76716 (17)0.0705 (8)
H11A0.0904−0.10150.79170.085*
C8−0.12183 (15)−0.0076 (2)0.50015 (18)0.0746 (8)
H8A−0.10930.04740.54220.090*
C60.03099 (18)−0.2520 (2)0.6239 (2)0.0797 (9)
H6A0.0627−0.30640.64990.096*
C4−0.07140 (17)−0.1813 (2)0.50041 (19)0.0781 (9)
H4A−0.1090−0.18840.44320.094*
C20−0.06095 (13)0.3655 (2)0.60888 (18)0.0692 (8)
H20A−0.06730.31220.63970.083*
C160.04601 (16)0.4528 (2)0.64050 (19)0.0776 (8)
H16A0.01960.51200.61200.093*
C170.11450 (18)0.4525 (2)0.6744 (2)0.0902 (10)
H17A0.13410.51130.66880.108*
C230.17226 (13)0.1832 (2)0.77905 (18)0.0719 (8)
H23A0.14490.12000.75020.086*
C180.15455 (15)0.3660 (2)0.7168 (2)0.0803 (9)
H18A0.20110.36730.73960.096*
C5−0.0236 (2)−0.2596 (2)0.5387 (2)0.0874 (10)
H5A−0.0279−0.31790.50720.105*
C250.23851 (14)0.1727 (3)0.7863 (2)0.0935 (10)
H25A0.22760.17490.73020.140*
H25B0.26050.10740.81330.140*
H25C0.26910.22930.82010.140*
C130.10778 (19)−0.2581 (3)0.8163 (2)0.1084 (12)
H13A0.1433−0.24780.87640.163*
H13B0.1200−0.31580.79630.163*
H13C0.0649−0.27300.80710.163*
C120.16764 (18)−0.1332 (3)0.7815 (2)0.1097 (12)
H12A0.1630−0.06820.75390.165*
H12B0.1788−0.18790.75790.165*
H12C0.2038−0.12730.84180.165*
C10−0.12660 (19)0.0421 (3)0.4259 (2)0.1045 (11)
H10A−0.08230.06970.44610.157*
H10B−0.15990.09760.40210.157*
H10C−0.1406−0.00970.38270.157*
C240.18908 (18)0.1848 (3)0.8679 (2)0.1184 (14)
H24A0.14700.18160.86270.178*
H24B0.21330.24820.89680.178*
H24C0.21750.12580.90020.178*
C21−0.08718 (19)0.4678 (3)0.6196 (3)0.1195 (13)
H21A−0.05740.48920.67850.179*
H21B−0.13320.45810.60260.179*
H21C−0.08750.52070.58440.179*
C9−0.19216 (18)−0.0515 (3)0.4695 (3)0.1260 (14)
H9A−0.1900−0.07400.51810.189*
H9B−0.2038−0.10990.43210.189*
H9C−0.22670.00180.43920.189*
C22−0.10306 (17)0.3317 (4)0.5178 (2)0.1415 (17)
H22A−0.08550.26660.51350.212*
H22B−0.10070.38390.48420.212*
H22C−0.15020.32260.49690.212*
U11U22U33U12U13U23
N20.0542 (12)0.0376 (11)0.0561 (12)−0.0011 (9)0.0376 (10)−0.0006 (9)
N10.0740 (14)0.0368 (11)0.0566 (12)0.0004 (10)0.0481 (11)−0.0005 (9)
C20.0741 (17)0.0376 (13)0.0615 (16)−0.0029 (12)0.0516 (15)−0.0020 (12)
C10.0513 (14)0.0483 (14)0.0475 (13)0.0015 (11)0.0330 (12)0.0025 (12)
C140.0511 (14)0.0420 (13)0.0495 (13)−0.0059 (11)0.0322 (12)−0.0040 (11)
C150.0612 (16)0.0429 (14)0.0589 (16)−0.0023 (12)0.0342 (14)0.0009 (12)
C190.0550 (16)0.0551 (15)0.0616 (16)−0.0068 (13)0.0355 (13)−0.0058 (13)
C70.089 (2)0.0415 (14)0.0725 (18)0.0033 (14)0.0599 (17)0.0001 (13)
C30.0817 (19)0.0557 (16)0.0582 (17)−0.0070 (14)0.0483 (16)−0.0065 (14)
C110.090 (2)0.0576 (17)0.074 (2)0.0200 (15)0.0539 (18)0.0119 (15)
C80.078 (2)0.080 (2)0.0591 (17)−0.0008 (17)0.0373 (16)−0.0067 (15)
C60.120 (3)0.0427 (16)0.100 (3)0.0088 (16)0.079 (2)−0.0006 (16)
C40.106 (2)0.069 (2)0.0666 (19)−0.0134 (18)0.0555 (18)−0.0150 (17)
C200.0616 (17)0.0590 (17)0.079 (2)0.0106 (14)0.0379 (16)0.0132 (15)
C160.086 (2)0.0506 (16)0.095 (2)−0.0034 (15)0.0534 (19)0.0093 (16)
C170.093 (2)0.0605 (19)0.125 (3)−0.0231 (18)0.069 (2)0.003 (2)
C230.0534 (16)0.0719 (18)0.083 (2)0.0030 (14)0.0369 (15)0.0051 (16)
C180.0636 (18)0.076 (2)0.101 (2)−0.0171 (16)0.0493 (18)−0.0044 (18)
C50.139 (3)0.0538 (19)0.096 (3)−0.009 (2)0.084 (2)−0.0201 (18)
C250.0622 (18)0.117 (3)0.094 (2)0.0095 (18)0.0426 (17)−0.009 (2)
C130.146 (3)0.089 (2)0.107 (3)0.024 (2)0.085 (3)0.034 (2)
C120.099 (3)0.127 (3)0.105 (3)0.010 (2)0.062 (2)0.019 (2)
C100.127 (3)0.099 (3)0.088 (2)0.021 (2)0.064 (2)0.022 (2)
C240.097 (2)0.168 (4)0.099 (3)0.056 (3)0.063 (2)0.052 (3)
C210.109 (3)0.097 (3)0.158 (4)0.034 (2)0.084 (3)0.006 (3)
C90.096 (3)0.149 (4)0.137 (3)−0.001 (3)0.071 (3)0.009 (3)
C220.067 (2)0.214 (5)0.096 (3)0.005 (3)0.023 (2)−0.040 (3)
N2—C11.310 (3)C16—H16A0.930
N2—C141.427 (3)C17—C181.373 (4)
N2—H2A0.860C17—H17A0.930
N1—C11.313 (3)C23—C241.523 (4)
N1—C21.432 (3)C23—C251.527 (4)
N1—H1A0.860C23—H23A0.980
C2—C31.402 (3)C18—H18A0.930
C2—C71.407 (3)C5—H5A0.930
C1—H10.930C25—H25A0.960
C14—C191.404 (3)C25—H25B0.960
C14—C151.407 (3)C25—H25C0.960
C15—C161.395 (3)C13—H13A0.960
C15—C201.512 (3)C13—H13B0.960
C19—C181.392 (3)C13—H13C0.960
C19—C231.524 (3)C12—H12A0.960
C7—C61.398 (3)C12—H12B0.960
C7—C111.520 (4)C12—H12C0.960
C3—C41.395 (4)C10—H10A0.960
C3—C81.523 (4)C10—H10B0.960
C11—C121.519 (4)C10—H10C0.960
C11—C131.531 (4)C24—H24A0.960
C11—H11A0.980C24—H24B0.960
C8—C101.520 (4)C24—H24C0.960
C8—C91.532 (4)C21—H21A0.960
C8—H8A0.980C21—H21B0.960
C6—C51.373 (4)C21—H21C0.960
C6—H6A0.930C9—H9A0.960
C4—C51.365 (4)C9—H9B0.960
C4—H4A0.930C9—H9C0.960
C20—C221.487 (4)C22—H22A0.960
C20—C211.522 (4)C22—H22B0.960
C20—H20A0.980C22—H22C0.960
C16—C171.367 (4)
C1—N2—C14120.78 (18)C19—C23—C25114.9 (2)
C1—N2—H2A119.6C24—C23—H23A107.0
C14—N2—H2A119.6C19—C23—H23A107.0
C1—N1—C2120.68 (18)C25—C23—H23A107.0
C1—N1—H1A119.7C17—C18—C19121.5 (3)
C2—N1—H1A119.7C17—C18—H18A119.3
C3—C2—C7121.5 (2)C19—C18—H18A119.3
C3—C2—N1119.7 (2)C4—C5—C6119.7 (3)
C7—C2—N1118.8 (2)C4—C5—H5A120.2
N2—C1—N1123.3 (2)C6—C5—H5A120.2
N2—C1—H1118.3C23—C25—H25A109.5
N1—C1—H1118.3C23—C25—H25B109.5
C19—C14—C15121.5 (2)H25A—C25—H25B109.5
C19—C14—N2119.7 (2)C23—C25—H25C109.5
C15—C14—N2118.7 (2)H25A—C25—H25C109.5
C16—C15—C14117.9 (2)H25B—C25—H25C109.5
C16—C15—C20121.0 (2)C11—C13—H13A109.5
C14—C15—C20121.1 (2)C11—C13—H13B109.5
C18—C19—C14117.5 (2)H13A—C13—H13B109.5
C18—C19—C23121.8 (2)C11—C13—H13C109.5
C14—C19—C23120.6 (2)H13A—C13—H13C109.5
C6—C7—C2117.5 (3)H13B—C13—H13C109.5
C6—C7—C11120.4 (3)C11—C12—H12A109.5
C2—C7—C11122.1 (2)C11—C12—H12B109.5
C4—C3—C2117.4 (3)H12A—C12—H12B109.5
C4—C3—C8120.3 (3)C11—C12—H12C109.5
C2—C3—C8122.2 (2)H12A—C12—H12C109.5
C12—C11—C7112.1 (2)H12B—C12—H12C109.5
C12—C11—C13110.4 (3)C8—C10—H10A109.5
C7—C11—C13113.1 (3)C8—C10—H10B109.5
C12—C11—H11A107.0H10A—C10—H10B109.5
C7—C11—H11A107.0C8—C10—H10C109.5
C13—C11—H11A107.0H10A—C10—H10C109.5
C10—C8—C3111.5 (3)H10B—C10—H10C109.5
C10—C8—C9110.4 (3)C23—C24—H24A109.5
C3—C8—C9111.6 (3)C23—C24—H24B109.5
C10—C8—H8A107.7H24A—C24—H24B109.5
C3—C8—H8A107.7C23—C24—H24C109.5
C9—C8—H8A107.7H24A—C24—H24C109.5
C5—C6—C7121.6 (3)H24B—C24—H24C109.5
C5—C6—H6A119.2C20—C21—H21A109.5
C7—C6—H6A119.2C20—C21—H21B109.5
C5—C4—C3122.1 (3)H21A—C21—H21B109.5
C5—C4—H4A118.9C20—C21—H21C109.5
C3—C4—H4A118.9H21A—C21—H21C109.5
C22—C20—C15111.0 (2)H21B—C21—H21C109.5
C22—C20—C21111.7 (3)C8—C9—H9A109.5
C15—C20—C21114.2 (2)C8—C9—H9B109.5
C22—C20—H20A106.4H9A—C9—H9B109.5
C15—C20—H20A106.4C8—C9—H9C109.5
C21—C20—H20A106.4H9A—C9—H9C109.5
C17—C16—C15121.1 (3)H9B—C9—H9C109.5
C17—C16—H16A119.5C20—C22—H22A109.5
C15—C16—H16A119.5C20—C22—H22B109.5
C16—C17—C18120.5 (3)H22A—C22—H22B109.5
C16—C17—H17A119.7C20—C22—H22C109.5
C18—C17—H17A119.7H22A—C22—H22C109.5
C24—C23—C19110.5 (2)H22B—C22—H22C109.5
C24—C23—C25110.1 (2)
D—H···AD—HH···AD···AD—H···A
N1—H1A···N1i0.862.032.882 (4)171
N2—H2A···N2i0.862.052.910 (3)175
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N1—H1A⋯N1i0.862.032.882 (4)171
N2—H2A⋯N2i0.862.052.910 (3)175

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  A stable N-heterocyclic carbene with a diboron backbone.

Authors:  Kelly E Krahulic; Gary D Enright; Masood Parvez; Roland Roesler
Journal:  J Am Chem Soc       Date:  2005-03-30       Impact factor: 15.419

  2 in total
  1 in total

1.  Validation of experimental molecular crystal structures with dispersion-corrected density functional theory calculations.

Authors:  Jacco van de Streek; Marcus A Neumann
Journal:  Acta Crystallogr B       Date:  2010-09-11
  1 in total

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