Literature DB >> 21203158

1-[2-(3,4-Dichloro-phen-yl)-5-(3,4,5-trimethoxy-phen-yl)-2,3-dihydro-1,3,4-oxadiazol-3-yl]ethanone.

Dao-Hang He1, Yong-Chuang Zhu.   

Abstract

The title compound, C(19)H(18)Cl(2)N(2)O(5), was synthesized by the reaction of N'-(3,4-dichloro-benzyl-idene)-3,4,5-trimethoxy-benzo-hydrazide and acetic anhydride. The oxadiazole ring makes dihedral angles of 82.82 (7) and 9.92 (7)° with the 3,4-dichloro-benzene and the 3,4,5-trimethoxy-benzene ring planes, respectively. The crystal structure is stabilized by inter-molecular C-H⋯ O and C-H⋯ N hydrogen bonds. Intra-molecular C-H⋯O and C-H⋯N hydrogen bonds are also present.

Entities:  

Year:  2008        PMID: 21203158      PMCID: PMC2962074          DOI: 10.1107/S1600536808020771

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Abdel et al. (2003 ▶); Abdel-Rahman & Farghaly (2004 ▶); Chai et al. (2002 ▶); Jin et al. (2006 ▶); Mohd et al. (2004 ▶).

Experimental

Crystal data

C19H18Cl2N2O5 M = 425.25 Monoclinic, a = 7.6743 (4) Å b = 15.9516 (8) Å c = 15.7483 (8) Å β = 90.8940 (10)° V = 1927.63 (17) Å3 Z = 4 Mo Kα radiation μ = 0.37 mm−1 T = 173 (2) K 0.47 × 0.39 × 0.32 mm

Data collection

Bruker SMART 1000 CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 2003 ▶) T min = 0.845, T max = 0.890 10032 measured reflections 4159 independent reflections 3238 reflections with I > 2σ(I) R int = 0.025

Refinement

R[F 2 > 2σ(F 2)] = 0.041 wR(F 2) = 0.125 S = 1.04 4159 reflections 257 parameters H-atom parameters constrained Δρmax = 0.34 e Å−3 Δρmin = −0.31 e Å−3 Data collection: SMART (Bruker, 2001 ▶); cell refinement: SAINT-Plus (Bruker, 2003 ▶); data reduction: SAINT-Plus; program(s) used to solve structure: SHELXTL (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXTL; molecular graphics: SHELXTL; software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808020771/wn2269sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808020771/wn2269Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C19H18Cl2N2O5F000 = 880
Mr = 425.25Dx = 1.465 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 5138 reflections
a = 7.6743 (4) Åθ = 2.6–27.1º
b = 15.9516 (8) ŵ = 0.37 mm1
c = 15.7483 (8) ÅT = 173 (2) K
β = 90.8940 (10)ºBlock, colorless
V = 1927.63 (17) Å30.47 × 0.39 × 0.32 mm
Z = 4
Bruker SMART 1000 CCD diffractometer4159 independent reflections
Radiation source: fine-focus sealed tube3238 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.025
T = 173(2) Kθmax = 27.2º
ω scansθmin = 1.8º
Absorption correction: multi-scan(SADABS; Sheldrick, 2003)h = −8→9
Tmin = 0.845, Tmax = 0.891k = −20→18
10032 measured reflectionsl = −13→20
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.041H-atom parameters constrained
wR(F2) = 0.125  w = 1/[σ2(Fo2) + (0.0625P)2 + 1.3473P] where P = (Fo2 + 2Fc2)/3
S = 1.04(Δ/σ)max = 0.001
4159 reflectionsΔρmax = 0.34 e Å3
257 parametersΔρmin = −0.31 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cl10.29475 (7)0.36125 (4)0.89108 (4)0.04132 (18)
Cl20.44596 (8)0.54237 (4)0.85758 (4)0.03835 (17)
C10.7817 (3)0.05267 (12)0.99579 (13)0.0233 (4)
C20.7051 (3)−0.00409 (13)1.05104 (13)0.0243 (4)
H20.66670.01361.10530.029*
C30.6857 (3)−0.08687 (12)1.02552 (13)0.0254 (4)
C40.7416 (3)−0.11303 (12)0.94532 (13)0.0250 (4)
C50.8160 (3)−0.05492 (13)0.89080 (12)0.0239 (4)
C60.8351 (3)0.02847 (12)0.91572 (13)0.0245 (4)
H60.88420.06830.87820.029*
C70.8153 (3)0.13859 (12)1.02448 (13)0.0229 (4)
C80.9032 (3)0.27301 (12)1.00923 (13)0.0240 (4)
H81.02840.29031.00800.029*
C90.7883 (3)0.33955 (12)0.97007 (12)0.0231 (4)
C100.6145 (3)0.32243 (12)0.95089 (13)0.0248 (4)
H100.56760.26850.96190.030*
C110.5100 (3)0.38450 (13)0.91558 (13)0.0262 (4)
C120.5775 (3)0.46408 (12)0.90009 (13)0.0263 (4)
C130.7498 (3)0.48130 (13)0.91895 (14)0.0297 (5)
H130.79630.53540.90810.036*
C140.8548 (3)0.41901 (13)0.95392 (13)0.0268 (4)
H140.97350.43080.96700.032*
C150.9181 (3)0.29242 (13)1.16484 (14)0.0297 (5)
C160.8863 (4)0.25497 (16)1.25067 (15)0.0428 (6)
H16A0.99300.22771.27170.064*
H16B0.79250.21341.24610.064*
H16C0.85250.29931.29020.064*
C170.5778 (3)−0.12792 (16)1.16051 (15)0.0383 (6)
H17A0.6858−0.11001.18920.058*
H17B0.5312−0.17741.18930.058*
H17C0.4923−0.08241.16230.058*
C180.6289 (3)−0.22110 (15)0.85465 (16)0.0368 (5)
H18A0.5145−0.19410.85800.055*
H18B0.6143−0.28210.85440.055*
H18C0.6861−0.20360.80240.055*
C190.9654 (3)−0.03053 (15)0.76156 (14)0.0351 (5)
H19A0.89120.01690.74500.053*
H19B1.0019−0.06070.71060.053*
H19C1.0685−0.00980.79250.053*
N10.7969 (2)0.16636 (10)1.09988 (11)0.0248 (4)
N20.8524 (2)0.25043 (10)1.09633 (10)0.0251 (4)
O10.6131 (2)−0.14829 (9)1.07411 (10)0.0345 (4)
O20.7344 (2)−0.19688 (9)0.92680 (10)0.0354 (4)
O30.8701 (2)−0.08591 (9)0.81492 (9)0.0304 (3)
O40.87792 (19)0.19385 (8)0.96599 (9)0.0265 (3)
O50.9955 (2)0.35859 (10)1.15404 (11)0.0401 (4)
U11U22U33U12U13U23
Cl10.0272 (3)0.0402 (3)0.0563 (4)−0.0036 (2)−0.0087 (2)0.0089 (3)
Cl20.0433 (3)0.0298 (3)0.0419 (3)0.0081 (2)−0.0035 (2)0.0093 (2)
C10.0220 (9)0.0187 (9)0.0290 (10)0.0012 (8)−0.0052 (8)0.0011 (8)
C20.0229 (10)0.0251 (10)0.0249 (10)0.0007 (8)−0.0009 (8)−0.0016 (8)
C30.0252 (10)0.0206 (10)0.0303 (11)−0.0032 (8)−0.0026 (8)0.0056 (8)
C40.0283 (10)0.0160 (9)0.0307 (11)0.0004 (8)−0.0043 (8)0.0000 (8)
C50.0243 (10)0.0225 (10)0.0247 (10)0.0030 (8)−0.0026 (8)−0.0024 (7)
C60.0255 (10)0.0217 (10)0.0261 (10)0.0000 (8)−0.0034 (8)0.0027 (8)
C70.0217 (9)0.0210 (10)0.0260 (10)0.0009 (8)−0.0011 (7)0.0024 (7)
C80.0276 (10)0.0172 (9)0.0273 (10)−0.0030 (8)0.0015 (8)−0.0023 (7)
C90.0280 (10)0.0194 (9)0.0219 (9)0.0003 (8)0.0017 (8)−0.0018 (7)
C100.0277 (10)0.0201 (10)0.0266 (10)−0.0032 (8)0.0012 (8)0.0004 (8)
C110.0243 (10)0.0283 (11)0.0261 (10)−0.0029 (8)0.0004 (8)0.0007 (8)
C120.0328 (11)0.0211 (10)0.0250 (10)0.0042 (8)0.0020 (8)0.0035 (8)
C130.0363 (12)0.0201 (10)0.0328 (11)−0.0040 (9)0.0030 (9)0.0025 (8)
C140.0257 (10)0.0216 (10)0.0332 (11)−0.0039 (8)0.0016 (8)−0.0016 (8)
C150.0363 (12)0.0215 (10)0.0312 (11)0.0032 (9)−0.0006 (9)−0.0070 (8)
C160.0668 (17)0.0339 (13)0.0277 (12)−0.0001 (12)−0.0001 (11)−0.0065 (10)
C170.0478 (14)0.0373 (13)0.0300 (12)−0.0120 (11)0.0034 (10)0.0064 (10)
C180.0350 (12)0.0305 (12)0.0448 (13)−0.0101 (10)−0.0005 (10)−0.0107 (10)
C190.0431 (13)0.0345 (12)0.0279 (11)−0.0098 (10)0.0052 (9)−0.0017 (9)
N10.0291 (9)0.0177 (8)0.0277 (9)−0.0016 (7)−0.0018 (7)−0.0001 (7)
N20.0309 (9)0.0199 (8)0.0245 (9)−0.0015 (7)0.0001 (7)−0.0013 (7)
O10.0480 (10)0.0232 (8)0.0325 (8)−0.0107 (7)0.0041 (7)0.0023 (6)
O20.0520 (10)0.0185 (7)0.0355 (9)−0.0018 (7)−0.0072 (7)−0.0029 (6)
O30.0388 (9)0.0246 (8)0.0278 (8)−0.0043 (6)0.0048 (6)−0.0035 (6)
O40.0367 (8)0.0168 (7)0.0262 (7)−0.0013 (6)0.0029 (6)−0.0010 (5)
O50.0531 (10)0.0255 (8)0.0416 (10)−0.0062 (7)−0.0027 (8)−0.0096 (7)
Cl1—C111.730 (2)C11—C121.394 (3)
Cl2—C121.734 (2)C12—C131.378 (3)
C1—C61.387 (3)C13—C141.388 (3)
C1—C21.392 (3)C13—H130.9500
C1—C71.465 (3)C14—H140.9500
C2—C31.388 (3)C15—O51.224 (3)
C2—H20.9500C15—N21.360 (3)
C3—O11.367 (2)C15—C161.501 (3)
C3—C41.404 (3)C16—H16A0.9800
C4—O21.370 (2)C16—H16B0.9800
C4—C51.392 (3)C16—H16C0.9800
C5—O31.364 (2)C17—O11.429 (3)
C5—C61.394 (3)C17—H17A0.9800
C6—H60.9500C17—H17B0.9800
C7—N11.277 (3)C17—H17C0.9800
C7—O41.368 (2)C18—O21.438 (3)
C8—O41.446 (2)C18—H18A0.9800
C8—N21.476 (3)C18—H18B0.9800
C8—C91.506 (3)C18—H18C0.9800
C8—H81.0000C19—O31.429 (3)
C9—C101.390 (3)C19—H19A0.9800
C9—C141.391 (3)C19—H19B0.9800
C10—C111.385 (3)C19—H19C0.9800
C10—H100.9500N1—N21.409 (2)
C6—C1—C2121.40 (18)C12—C13—H13120.3
C6—C1—C7119.20 (18)C14—C13—H13120.3
C2—C1—C7119.32 (18)C13—C14—C9120.8 (2)
C3—C2—C1118.83 (19)C13—C14—H14119.6
C3—C2—H2120.6C9—C14—H14119.6
C1—C2—H2120.6O5—C15—N2119.3 (2)
O1—C3—C2124.24 (19)O5—C15—C16123.7 (2)
O1—C3—C4115.06 (18)N2—C15—C16117.0 (2)
C2—C3—C4120.70 (18)C15—C16—H16A109.5
O2—C4—C5122.30 (19)C15—C16—H16B109.5
O2—C4—C3118.03 (18)H16A—C16—H16B109.5
C5—C4—C3119.42 (18)C15—C16—H16C109.5
O3—C5—C4115.61 (18)H16A—C16—H16C109.5
O3—C5—C6124.10 (19)H16B—C16—H16C109.5
C4—C5—C6120.27 (19)O1—C17—H17A109.5
C1—C6—C5119.37 (19)O1—C17—H17B109.5
C1—C6—H6120.3H17A—C17—H17B109.5
C5—C6—H6120.3O1—C17—H17C109.5
N1—C7—O4116.60 (17)H17A—C17—H17C109.5
N1—C7—C1126.14 (18)H17B—C17—H17C109.5
O4—C7—C1117.22 (17)O2—C18—H18A109.5
O4—C8—N2100.90 (14)O2—C18—H18B109.5
O4—C8—C9110.42 (16)H18A—C18—H18B109.5
N2—C8—C9113.01 (16)O2—C18—H18C109.5
O4—C8—H8110.7H18A—C18—H18C109.5
N2—C8—H8110.7H18B—C18—H18C109.5
C9—C8—H8110.7O3—C19—H19A109.5
C10—C9—C14119.51 (18)O3—C19—H19B109.5
C10—C9—C8120.30 (18)H19A—C19—H19B109.5
C14—C9—C8120.18 (18)O3—C19—H19C109.5
C11—C10—C9119.63 (19)H19A—C19—H19C109.5
C11—C10—H10120.2H19B—C19—H19C109.5
C9—C10—H10120.2C7—N1—N2104.79 (16)
C10—C11—C12120.43 (19)C15—N2—N1123.09 (17)
C10—C11—Cl1118.75 (16)C15—N2—C8121.12 (17)
C12—C11—Cl1120.82 (16)N1—N2—C8110.70 (15)
C13—C12—C11120.13 (19)C3—O1—C17117.06 (17)
C13—C12—Cl2119.37 (16)C4—O2—C18116.81 (17)
C11—C12—Cl2120.49 (17)C5—O3—C19117.18 (16)
C12—C13—C14119.45 (19)C7—O4—C8106.95 (15)
C6—C1—C2—C31.4 (3)C10—C11—C12—Cl2−178.89 (16)
C7—C1—C2—C3−175.26 (18)Cl1—C11—C12—Cl21.2 (3)
C1—C2—C3—O1179.76 (19)C11—C12—C13—C14−0.4 (3)
C1—C2—C3—C4−0.2 (3)Cl2—C12—C13—C14179.24 (16)
O1—C3—C4—O2−6.1 (3)C12—C13—C14—C90.0 (3)
C2—C3—C4—O2173.88 (18)C10—C9—C14—C130.0 (3)
O1—C3—C4—C5179.51 (18)C8—C9—C14—C13−179.09 (19)
C2—C3—C4—C5−0.5 (3)O4—C7—N1—N2−0.3 (2)
O2—C4—C5—O34.6 (3)C1—C7—N1—N2177.36 (18)
C3—C4—C5—O3178.68 (18)O5—C15—N2—N1165.36 (19)
O2—C4—C5—C6−174.01 (18)C16—C15—N2—N1−16.2 (3)
C3—C4—C5—C60.1 (3)O5—C15—N2—C812.9 (3)
C2—C1—C6—C5−1.8 (3)C16—C15—N2—C8−168.66 (19)
C7—C1—C6—C5174.89 (18)C7—N1—N2—C15−153.3 (2)
O3—C5—C6—C1−177.46 (18)C7—N1—N2—C81.6 (2)
C4—C5—C6—C11.0 (3)O4—C8—N2—C15153.32 (18)
C6—C1—C7—N1−169.31 (19)C9—C8—N2—C15−88.8 (2)
C2—C1—C7—N17.4 (3)O4—C8—N2—N1−2.2 (2)
C6—C1—C7—O48.3 (3)C9—C8—N2—N1115.70 (18)
C2—C1—C7—O4−174.95 (17)C2—C3—O1—C17−9.0 (3)
O4—C8—C9—C1045.1 (2)C4—C3—O1—C17171.03 (19)
N2—C8—C9—C10−67.1 (2)C5—C4—O2—C18−65.1 (3)
O4—C8—C9—C14−135.80 (19)C3—C4—O2—C18120.8 (2)
N2—C8—C9—C14112.0 (2)C4—C5—O3—C19−172.83 (18)
C14—C9—C10—C110.3 (3)C6—C5—O3—C195.7 (3)
C8—C9—C10—C11179.43 (18)N1—C7—O4—C8−1.2 (2)
C9—C10—C11—C12−0.7 (3)C1—C7—O4—C8−179.02 (17)
C9—C10—C11—Cl1179.22 (15)N2—C8—O4—C71.92 (19)
C10—C11—C12—C130.7 (3)C9—C8—O4—C7−117.85 (17)
Cl1—C11—C12—C13−179.17 (16)
D—H···AD—HH···AD···AD—H···A
C6—H6···O40.952.432.772 (2)101
C8—H8···O2i1.002.563.184 (3)121
C10—H10···O1ii0.952.433.302 (3)153
C13—H13···O5iii0.952.533.426 (3)156
C16—H16B···N10.982.422.839 (3)105
C18—H18A···N1ii0.982.533.468 (3)160
C18—H18C···O30.982.362.916 (3)116
C19—H19A···O5iv0.982.583.233 (3)124
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6⋯O40.952.432.772 (2)101
C8—H8⋯O2i1.002.563.184 (3)121
C10—H10⋯O1ii0.952.433.302 (3)153
C13—H13⋯O5iii0.952.533.426 (3)156
C16—H16B⋯N10.982.422.839 (3)105
C18—H18A⋯N1ii0.982.533.468 (3)160
C18—H18C⋯O30.982.362.916 (3)116
C19—H19A⋯O5iv0.982.583.233 (3)124

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

  2 in total

1.  Synthesis, structure, and bioactivity of N'-substituted benzylidene-3,4,5-trimethoxybenzohydrazide and 3-acetyl-2-substituted phenyl-5-(3,4,5-trimethoxyphenyl)-2,3-dihydro-1,3,4-oxadiazole derivatives.

Authors:  Linhong Jin; Jiang Chen; Baoan Song; Zhuo Chen; Song Yang; Qianzhu Li; Deyu Hu; Ruiqing Xu
Journal:  Bioorg Med Chem Lett       Date:  2006-07-28       Impact factor: 2.823

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

  2 in total
  1 in total

1.  2-[4-Acetyl-5-(biphenyl-4-yl)-4,5-dihydro-1,3,4-oxadiazol-2-yl]phenyl acetate.

Authors:  Wagee A Yehye; Azhar Ariffin; Noorsaadah Abdul Rahman; Seik Weng Ng
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2010-03-20
  1 in total

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