Literature DB >> 21203145

Redetermination of cyclo-trimethyl-ene-trinitramine.

Patrick Hakey1, Wayne Ouellette, Jon Zubieta, Timothy Korter.   

Abstract

The redetermined structure of 1,3,5-trinitro-1,3,5-triaza-cyclo-hexane, C(3)H(6)N(6)O(6), at 90 (2) K has ortho-rhom-bic (Pbca) symmetry. It is of inter-est with respect to energetic compounds. The structure was originally investigated through X-ray diffraction by Hultgren [(1936). J. Chem. Phys.4, 84]. Later X-ray investigations were completed by McCrone [(1950). Anal. Chem.22, 954-955] and Harris, Reed & Gluyas [(1959). AFOSR-TR-59-165 Ohio State University Research Foundation, Columbus, Ohio, USA]. A single-crystal neutron diffraction study was performed by Choi & Prince [(1972). Acta Cryst. B28, 2857-2862] to ascertain the H-atom positions, which had not been defined by the earlier X-ray diffraction studies. All previous studies were performed at or near room temperature. The structure provided is the α polymorph of the title compound. The ring atoms are arranged in the chair conformation with two nitro groups occupying pseudo-equatorial positions and the remaining nitro group is axial. The crystal packing is stabilized by close intramolecular interactions from one H atom in each methylene group to O atoms of adjacent nitro groups, ranging from 2.251 to 2.593 Å.

Entities:  

Year:  2008        PMID: 21203145      PMCID: PMC2962061          DOI: 10.1107/S1600536808019727

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Akhavan (2004 ▶); Bachmann & Sheehan (1949 ▶); Brockman et al. (1949 ▶); Choi & Prince (1972 ▶); Ciezak et al. (2007 ▶); Davidson et al. (2008 ▶); Harris et al. (1959 ▶); Henning (1899 ▶); von Herz et al. (1920 ▶); Hultgren (1936 ▶); McCrone (1950 ▶); Yi & Cai (2008 ▶).

Experimental

Crystal data

C3H6N6O6 M = 222.14 Orthorhombic, a = 11.4195 (8) Å b = 10.5861 (7) Å c = 13.1401 (9) Å V = 1588.48 (19) Å3 Z = 8 Mo Kα radiation μ = 0.18 mm−1 T = 90 (2) K 0.34 × 0.20 × 0.20 mm

Data collection

Bruker APEX CCD area-detector diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2002 ▶)T min = 0.943, T max = 0.966 15555 measured reflections 1973 independent reflections 1783 reflections with I > 2σ(I) R int = 0.028

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.082 S = 1.05 1973 reflections 160 parameters All H-atom parameters refined Δρmax = 0.34 e Å−3 Δρmin = −0.20 e Å−3 Data collection: SMART (Bruker, 2002 ▶); cell refinement: SAINT (Bruker, 2002 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: CrystalMaker (Palmer, 2006 ▶); software used to prepare material for publication: SHELXTL (Sheldrick, 2008 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808019727/lh2649sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808019727/lh2649Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C3H6N6O6F000 = 912
Mr = 222.14Dx = 1.858 Mg m3
Orthorhombic, PbcaMo Kα radiation λ = 0.71073 Å
Hall symbol: -P2ac2abCell parameters from 4268 reflections
a = 11.4195 (8) Åθ = 3.1–28.2º
b = 10.5861 (7) ŵ = 0.18 mm1
c = 13.1401 (9) ÅT = 90 (2) K
V = 1588.48 (19) Å3Block, colorless
Z = 80.34 × 0.20 × 0.20 mm
Bruker APEX CCD area-detector diffractometer1973 independent reflections
Monochromator: graphite1783 reflections with I > 2σ(I)
Detector resolution: 512 pixels mm-1Rint = 0.028
T = 90(2) Kθmax = 28.3º
φ and ω scansθmin = 3.1º
Absorption correction: multi-scan(SADABS; Bruker, 2002)h = −15→15
Tmin = 0.943, Tmax = 0.966k = −14→14
15555 measured reflectionsl = −17→17
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032All H-atom parameters refined
wR(F2) = 0.082  w = 1/[σ2(Fo2) + (0.0397P)2 + 0.7623P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
1973 reflectionsΔρmax = 0.34 e Å3
160 parametersΔρmin = −0.19 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O10.96483 (8)0.36616 (9)1.02694 (7)0.0224 (2)
O20.85097 (8)0.24565 (9)1.11679 (6)0.0206 (2)
O30.81846 (8)−0.03257 (8)1.07225 (7)0.0208 (2)
O40.93294 (8)−0.10398 (8)0.95344 (7)0.0213 (2)
O51.06779 (7)0.06532 (8)0.73282 (6)0.01755 (19)
O61.09321 (8)0.26371 (8)0.77072 (7)0.0205 (2)
N10.81806 (8)0.26489 (9)0.94911 (7)0.0121 (2)
N20.79657 (8)0.04040 (9)0.91362 (7)0.0127 (2)
N30.93467 (8)0.16430 (9)0.82559 (7)0.0134 (2)
N40.88448 (9)0.29180 (9)1.03687 (7)0.0144 (2)
N50.85527 (9)−0.03513 (9)0.98530 (8)0.0151 (2)
N61.03699 (9)0.16474 (10)0.77253 (7)0.0138 (2)
C10.74033 (10)0.15500 (11)0.95281 (8)0.0126 (2)
C20.87808 (10)0.28363 (10)0.85261 (9)0.0135 (2)
C30.85587 (10)0.05633 (11)0.81621 (9)0.0140 (2)
H1A0.6771 (13)0.1709 (13)0.9097 (11)0.012 (3)*
H1B0.7145 (13)0.1409 (13)1.0185 (11)0.012 (3)*
H2A0.8192 (12)0.3030 (13)0.8023 (11)0.010 (3)*
H2B0.9329 (13)0.3488 (14)0.8585 (11)0.016 (4)*
H3A0.7972 (13)0.0760 (14)0.7669 (12)0.020 (4)*
H3B0.8988 (13)−0.0155 (14)0.8005 (11)0.014 (3)*
U11U22U33U12U13U23
O10.0196 (4)0.0205 (5)0.0271 (5)−0.0051 (4)−0.0064 (4)−0.0029 (4)
O20.0257 (5)0.0252 (5)0.0110 (4)0.0027 (4)−0.0017 (3)−0.0004 (3)
O30.0261 (5)0.0210 (4)0.0152 (4)−0.0046 (4)−0.0036 (4)0.0046 (3)
O40.0172 (4)0.0146 (4)0.0320 (5)0.0030 (3)−0.0054 (4)−0.0011 (4)
O50.0170 (4)0.0202 (4)0.0154 (4)0.0052 (3)0.0031 (3)−0.0015 (3)
O60.0166 (4)0.0196 (4)0.0255 (5)−0.0036 (3)0.0044 (4)0.0044 (3)
N10.0128 (4)0.0137 (4)0.0099 (4)0.0002 (4)−0.0010 (3)−0.0014 (3)
N20.0120 (4)0.0129 (4)0.0133 (5)0.0004 (3)−0.0002 (3)0.0017 (3)
N30.0128 (5)0.0122 (4)0.0152 (4)0.0001 (3)0.0041 (4)−0.0003 (4)
N40.0148 (5)0.0140 (5)0.0143 (5)0.0040 (4)−0.0031 (4)−0.0030 (4)
N50.0140 (5)0.0116 (4)0.0197 (5)−0.0033 (4)−0.0050 (4)0.0019 (4)
N60.0125 (4)0.0181 (5)0.0109 (4)0.0011 (4)0.0003 (3)0.0033 (4)
C10.0101 (5)0.0152 (5)0.0126 (5)0.0005 (4)0.0010 (4)−0.0002 (4)
C20.0158 (5)0.0114 (5)0.0132 (5)0.0018 (4)0.0022 (4)0.0008 (4)
C30.0151 (5)0.0131 (5)0.0139 (5)−0.0010 (4)0.0021 (4)−0.0019 (4)
O1—N41.2159 (13)N2—C11.4660 (14)
O2—N41.2199 (13)N3—N61.3606 (13)
O3—N51.2177 (14)N3—C31.4600 (14)
O4—N51.2219 (14)N3—C21.4626 (14)
O5—N61.2263 (13)C1—H1A0.934 (15)
O6—N61.2290 (13)C1—H1B0.925 (14)
N1—N41.4093 (13)C2—H2A0.964 (15)
N1—C21.4551 (14)C2—H2B0.934 (15)
N1—C11.4641 (14)C3—H3A0.956 (16)
N2—N51.4056 (13)C3—H3B0.928 (15)
N2—C31.4579 (14)
N4—N1—C2115.59 (9)N1—C1—N2112.35 (9)
N4—N1—C1117.37 (9)N1—C1—H1A107.8 (9)
C2—N1—C1115.01 (9)N2—C1—H1A105.9 (9)
N5—N2—C3115.63 (9)N1—C1—H1B110.7 (9)
N5—N2—C1116.38 (9)N2—C1—H1B109.5 (9)
C3—N2—C1114.59 (9)H1A—C1—H1B110.4 (13)
N6—N3—C3119.26 (9)N1—C2—N3107.57 (9)
N6—N3—C2120.05 (9)N1—C2—H2A107.3 (8)
C3—N3—C2115.10 (9)N3—C2—H2A109.0 (8)
O1—N4—O2126.04 (10)N1—C2—H2B110.1 (9)
O1—N4—N1116.69 (10)N3—C2—H2B111.2 (9)
O2—N4—N1117.04 (10)H2A—C2—H2B111.5 (12)
O3—N5—O4125.82 (10)N2—C3—N3107.62 (9)
O3—N5—N2116.84 (10)N2—C3—H3A107.2 (9)
O4—N5—N2117.12 (10)N3—C3—H3A108.6 (9)
O5—N6—O6125.00 (10)N2—C3—H3B110.2 (9)
O5—N6—N3117.48 (10)N3—C3—H3B109.5 (9)
O6—N6—N3117.48 (10)H3A—C3—H3B113.5 (13)
C2—N1—N4—O124.84 (13)N4—N1—C1—N2−93.07 (11)
C1—N1—N4—O1165.72 (10)C2—N1—C1—N248.04 (12)
C2—N1—N4—O2−160.30 (10)N5—N2—C1—N191.11 (11)
C1—N1—N4—O2−19.42 (14)C3—N2—C1—N1−48.17 (12)
C3—N2—N5—O3167.78 (10)N4—N1—C2—N390.33 (11)
C1—N2—N5—O328.92 (13)C1—N1—C2—N3−51.49 (12)
C3—N2—N5—O4−17.30 (14)N6—N3—C2—N1−148.08 (10)
C1—N2—N5—O4−156.16 (10)C3—N3—C2—N158.46 (12)
C3—N3—N6—O5−12.18 (14)N5—N2—C3—N3−87.58 (11)
C2—N3—N6—O5−164.56 (10)C1—N2—C3—N352.01 (12)
C3—N3—N6—O6170.00 (10)N6—N3—C3—N2147.49 (9)
C2—N3—N6—O617.63 (15)C2—N3—C3—N2−58.82 (12)
  4 in total

1.  High-pressure vibrational spectroscopy of energetic materials: hexahydro-1,3,5-trinitro-1,3,5-triazine.

Authors:  Jennifer A Ciezak; Timothy A Jenkins; Zhenxian Liu; Russell J Hemley
Journal:  J Phys Chem A       Date:  2007-01-11       Impact factor: 2.781

2.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

3.  Nitrolysis of hexamethylenetetramine; preparation of pure cyclonite.

Authors:  F J BROCKMAN; D C DOWNING; G F WRIGHT
Journal:  Can J Res       Date:  1949-05

4.  Synthesis of RDX by nitrolysis of hexamethylenetetramine in fluorous media.

Authors:  Wen-Bin Yi; Chun Cai
Journal:  J Hazard Mater       Date:  2007-10-18       Impact factor: 10.588

  4 in total
  8 in total

1.  Adsorption and decomposition mechanism of hexogen (RDX) on Al(111) surface by periodic DFT calculations.

Authors:  Cai-Chao Ye; Feng-Qi Zhao; Si-Yu Xu; Xue-Hai Ju
Journal:  J Mol Model       Date:  2013-02-24       Impact factor: 1.810

2.  A comparative study of the vibrational and thermodynamic properties of α-RDX and γ-RDX under ambient conditions.

Authors:  Sheng-Hai Zhu; Han Qin; Wei Zeng; Ying-Meng Cai; Xu-Yang Jin; Yu-Hang Wang; Fu-Sheng Liu; Bin Tang; Qi-Jun Liu
Journal:  J Mol Model       Date:  2019-06-07       Impact factor: 1.810

3.  A DFT study of adsorption and decomposition of hexahydro-1,3,5-trinitro-1,3,5-triazine on Mg(0001) surface.

Authors:  Cai-Chao Ye; Feng-Qi Zhao; Si-Yu Xu; Xue-Hai Ju
Journal:  J Mol Model       Date:  2013-08-09       Impact factor: 1.810

4.  Vibrational spectra of an RDX film over an aluminum substrate from molecular dynamics simulations and density functional theory.

Authors:  Julibeth M Martínez de la Hoz; Perla B Balbuena
Journal:  J Mol Model       Date:  2012-10-20       Impact factor: 1.810

5.  Fluorescence-based sensing of 2,4,6-trinitrotoluene (TNT) using a multi-channeled poly(methyl methacrylate) (PMMA) microimmunosensor.

Authors:  Paul T Charles; Andre A Adams; Peter B Howell; Scott A Trammell; Jeffrey R Deschamps; Anne W Kusterbeck
Journal:  Sensors (Basel)       Date:  2010-01-22       Impact factor: 3.576

6.  An ultrasonic-assisted synthesis of leather-derived luminescent graphene quantum dots: catalytic reduction and switch on-off probe for nitro-explosives.

Authors:  Shamsa Kanwal; Shanaz Jahan; Farukh Mansoor
Journal:  RSC Adv       Date:  2020-06-17       Impact factor: 4.036

7.  Strategies for Achieving Balance between Detonation Performance and Crystal Stability of High-Energy-Density Materials.

Authors:  Chongyang Li; Hui Li; He-Hou Zong; Yongli Huang; Michael Gozin; Chang Q Sun; Lei Zhang
Journal:  iScience       Date:  2020-02-26

8.  MoS2 QDs/8-Armed Poly(Ethylene Glycol) Fluorescence Sensor for Three Nitrotoluenes (TNT) Detection.

Authors:  Xiaoyuan Zhang; Zhiqiang Su
Journal:  Biosensors (Basel)       Date:  2021-11-25
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.