| Literature DB >> 21203145 |
Patrick Hakey1, Wayne Ouellette, Jon Zubieta, Timothy Korter.
Abstract
The redetermined structure of 1,3,5-trinitro-1,3,5-triaza-cyclo-hexane, C(3)H(6)N(6)O(6), at 90 (2) K has ortho-rhom-bic (Pbca) symmetry. It is of inter-est with respect to energetic compounds. The structure was originally investigated through X-ray diffraction by Hultgren [(1936). J. Chem. Phys.4, 84]. Later X-ray investigations were completed by McCrone [(1950). Anal. Chem.22, 954-955] and Harris, Reed & Gluyas [(1959). AFOSR-TR-59-165 Ohio State University Research Foundation, Columbus, Ohio, USA]. A single-crystal neutron diffraction study was performed by Choi & Prince [(1972). Acta Cryst. B28, 2857-2862] to ascertain the H-atom positions, which had not been defined by the earlier X-ray diffraction studies. All previous studies were performed at or near room temperature. The structure provided is the α polymorph of the title compound. The ring atoms are arranged in the chair conformation with two nitro groups occupying pseudo-equatorial positions and the remaining nitro group is axial. The crystal packing is stabilized by close intramolecular interactions from one H atom in each methylene group to O atoms of adjacent nitro groups, ranging from 2.251 to 2.593 Å.Entities:
Year: 2008 PMID: 21203145 PMCID: PMC2962061 DOI: 10.1107/S1600536808019727
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C3H6N6O6 | |
| Orthorhombic, | Mo |
| Hall symbol: -P2ac2ab | Cell parameters from 4268 reflections |
| θ = 3.1–28.2º | |
| µ = 0.18 mm−1 | |
| Block, colorless | |
| 0.34 × 0.20 × 0.20 mm |
| Bruker APEX CCD area-detector diffractometer | 1973 independent reflections |
| Monochromator: graphite | 1783 reflections with |
| Detector resolution: 512 pixels mm-1 | |
| θmax = 28.3º | |
| φ and ω scans | θmin = 3.1º |
| Absorption correction: multi-scan(SADABS; Bruker, 2002) | |
| 15555 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| All H-atom parameters refined | |
| | |
| (Δ/σ)max = 0.001 | |
| 1973 reflections | Δρmax = 0.34 e Å−3 |
| 160 parameters | Δρmin = −0.19 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.96483 (8) | 0.36616 (9) | 1.02694 (7) | 0.0224 (2) | |
| O2 | 0.85097 (8) | 0.24565 (9) | 1.11679 (6) | 0.0206 (2) | |
| O3 | 0.81846 (8) | −0.03257 (8) | 1.07225 (7) | 0.0208 (2) | |
| O4 | 0.93294 (8) | −0.10398 (8) | 0.95344 (7) | 0.0213 (2) | |
| O5 | 1.06779 (7) | 0.06532 (8) | 0.73282 (6) | 0.01755 (19) | |
| O6 | 1.09321 (8) | 0.26371 (8) | 0.77072 (7) | 0.0205 (2) | |
| N1 | 0.81806 (8) | 0.26489 (9) | 0.94911 (7) | 0.0121 (2) | |
| N2 | 0.79657 (8) | 0.04040 (9) | 0.91362 (7) | 0.0127 (2) | |
| N3 | 0.93467 (8) | 0.16430 (9) | 0.82559 (7) | 0.0134 (2) | |
| N4 | 0.88448 (9) | 0.29180 (9) | 1.03687 (7) | 0.0144 (2) | |
| N5 | 0.85527 (9) | −0.03513 (9) | 0.98530 (8) | 0.0151 (2) | |
| N6 | 1.03699 (9) | 0.16474 (10) | 0.77253 (7) | 0.0138 (2) | |
| C1 | 0.74033 (10) | 0.15500 (11) | 0.95281 (8) | 0.0126 (2) | |
| C2 | 0.87808 (10) | 0.28363 (10) | 0.85261 (9) | 0.0135 (2) | |
| C3 | 0.85587 (10) | 0.05633 (11) | 0.81621 (9) | 0.0140 (2) | |
| H1A | 0.6771 (13) | 0.1709 (13) | 0.9097 (11) | 0.012 (3)* | |
| H1B | 0.7145 (13) | 0.1409 (13) | 1.0185 (11) | 0.012 (3)* | |
| H2A | 0.8192 (12) | 0.3030 (13) | 0.8023 (11) | 0.010 (3)* | |
| H2B | 0.9329 (13) | 0.3488 (14) | 0.8585 (11) | 0.016 (4)* | |
| H3A | 0.7972 (13) | 0.0760 (14) | 0.7669 (12) | 0.020 (4)* | |
| H3B | 0.8988 (13) | −0.0155 (14) | 0.8005 (11) | 0.014 (3)* |
| O1 | 0.0196 (4) | 0.0205 (5) | 0.0271 (5) | −0.0051 (4) | −0.0064 (4) | −0.0029 (4) |
| O2 | 0.0257 (5) | 0.0252 (5) | 0.0110 (4) | 0.0027 (4) | −0.0017 (3) | −0.0004 (3) |
| O3 | 0.0261 (5) | 0.0210 (4) | 0.0152 (4) | −0.0046 (4) | −0.0036 (4) | 0.0046 (3) |
| O4 | 0.0172 (4) | 0.0146 (4) | 0.0320 (5) | 0.0030 (3) | −0.0054 (4) | −0.0011 (4) |
| O5 | 0.0170 (4) | 0.0202 (4) | 0.0154 (4) | 0.0052 (3) | 0.0031 (3) | −0.0015 (3) |
| O6 | 0.0166 (4) | 0.0196 (4) | 0.0255 (5) | −0.0036 (3) | 0.0044 (4) | 0.0044 (3) |
| N1 | 0.0128 (4) | 0.0137 (4) | 0.0099 (4) | 0.0002 (4) | −0.0010 (3) | −0.0014 (3) |
| N2 | 0.0120 (4) | 0.0129 (4) | 0.0133 (5) | 0.0004 (3) | −0.0002 (3) | 0.0017 (3) |
| N3 | 0.0128 (5) | 0.0122 (4) | 0.0152 (4) | 0.0001 (3) | 0.0041 (4) | −0.0003 (4) |
| N4 | 0.0148 (5) | 0.0140 (5) | 0.0143 (5) | 0.0040 (4) | −0.0031 (4) | −0.0030 (4) |
| N5 | 0.0140 (5) | 0.0116 (4) | 0.0197 (5) | −0.0033 (4) | −0.0050 (4) | 0.0019 (4) |
| N6 | 0.0125 (4) | 0.0181 (5) | 0.0109 (4) | 0.0011 (4) | 0.0003 (3) | 0.0033 (4) |
| C1 | 0.0101 (5) | 0.0152 (5) | 0.0126 (5) | 0.0005 (4) | 0.0010 (4) | −0.0002 (4) |
| C2 | 0.0158 (5) | 0.0114 (5) | 0.0132 (5) | 0.0018 (4) | 0.0022 (4) | 0.0008 (4) |
| C3 | 0.0151 (5) | 0.0131 (5) | 0.0139 (5) | −0.0010 (4) | 0.0021 (4) | −0.0019 (4) |
| O1—N4 | 1.2159 (13) | N2—C1 | 1.4660 (14) |
| O2—N4 | 1.2199 (13) | N3—N6 | 1.3606 (13) |
| O3—N5 | 1.2177 (14) | N3—C3 | 1.4600 (14) |
| O4—N5 | 1.2219 (14) | N3—C2 | 1.4626 (14) |
| O5—N6 | 1.2263 (13) | C1—H1A | 0.934 (15) |
| O6—N6 | 1.2290 (13) | C1—H1B | 0.925 (14) |
| N1—N4 | 1.4093 (13) | C2—H2A | 0.964 (15) |
| N1—C2 | 1.4551 (14) | C2—H2B | 0.934 (15) |
| N1—C1 | 1.4641 (14) | C3—H3A | 0.956 (16) |
| N2—N5 | 1.4056 (13) | C3—H3B | 0.928 (15) |
| N2—C3 | 1.4579 (14) | ||
| N4—N1—C2 | 115.59 (9) | N1—C1—N2 | 112.35 (9) |
| N4—N1—C1 | 117.37 (9) | N1—C1—H1A | 107.8 (9) |
| C2—N1—C1 | 115.01 (9) | N2—C1—H1A | 105.9 (9) |
| N5—N2—C3 | 115.63 (9) | N1—C1—H1B | 110.7 (9) |
| N5—N2—C1 | 116.38 (9) | N2—C1—H1B | 109.5 (9) |
| C3—N2—C1 | 114.59 (9) | H1A—C1—H1B | 110.4 (13) |
| N6—N3—C3 | 119.26 (9) | N1—C2—N3 | 107.57 (9) |
| N6—N3—C2 | 120.05 (9) | N1—C2—H2A | 107.3 (8) |
| C3—N3—C2 | 115.10 (9) | N3—C2—H2A | 109.0 (8) |
| O1—N4—O2 | 126.04 (10) | N1—C2—H2B | 110.1 (9) |
| O1—N4—N1 | 116.69 (10) | N3—C2—H2B | 111.2 (9) |
| O2—N4—N1 | 117.04 (10) | H2A—C2—H2B | 111.5 (12) |
| O3—N5—O4 | 125.82 (10) | N2—C3—N3 | 107.62 (9) |
| O3—N5—N2 | 116.84 (10) | N2—C3—H3A | 107.2 (9) |
| O4—N5—N2 | 117.12 (10) | N3—C3—H3A | 108.6 (9) |
| O5—N6—O6 | 125.00 (10) | N2—C3—H3B | 110.2 (9) |
| O5—N6—N3 | 117.48 (10) | N3—C3—H3B | 109.5 (9) |
| O6—N6—N3 | 117.48 (10) | H3A—C3—H3B | 113.5 (13) |
| C2—N1—N4—O1 | 24.84 (13) | N4—N1—C1—N2 | −93.07 (11) |
| C1—N1—N4—O1 | 165.72 (10) | C2—N1—C1—N2 | 48.04 (12) |
| C2—N1—N4—O2 | −160.30 (10) | N5—N2—C1—N1 | 91.11 (11) |
| C1—N1—N4—O2 | −19.42 (14) | C3—N2—C1—N1 | −48.17 (12) |
| C3—N2—N5—O3 | 167.78 (10) | N4—N1—C2—N3 | 90.33 (11) |
| C1—N2—N5—O3 | 28.92 (13) | C1—N1—C2—N3 | −51.49 (12) |
| C3—N2—N5—O4 | −17.30 (14) | N6—N3—C2—N1 | −148.08 (10) |
| C1—N2—N5—O4 | −156.16 (10) | C3—N3—C2—N1 | 58.46 (12) |
| C3—N3—N6—O5 | −12.18 (14) | N5—N2—C3—N3 | −87.58 (11) |
| C2—N3—N6—O5 | −164.56 (10) | C1—N2—C3—N3 | 52.01 (12) |
| C3—N3—N6—O6 | 170.00 (10) | N6—N3—C3—N2 | 147.49 (9) |
| C2—N3—N6—O6 | 17.63 (15) | C2—N3—C3—N2 | −58.82 (12) |