Literature DB >> 21203122

6-(3-Pyrid-yl)-3-(3,4,5-trimethoxy-phen-yl)-1,2,4-triazolo[3,4-b][1,3,4]thia-diazole.

Haitang Du, Haijun Du, Ying An, Shengnan Li.   

Abstract

In the mol-ecule of the title compound, C(17)H(15)N(5)O(3)S, the planar central heterocylic ring system is oriented with respect to the benzene and pyridine rings at dihedral angles of 6.61 (3) and 19.22 (3)°, respectively. An intra-molecular C-H⋯N hydrogen bond results in the formation of a six-membered ring, adopting a flattened boat conformation. In the crystal structure, inter-molecular C-H⋯N hydrogen bonds link the mol-ecules.

Entities:  

Year:  2008        PMID: 21203122      PMCID: PMC2962035          DOI: 10.1107/S1600536808019855

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For general background, see: Karabasanagouda et al. (2007 ▶); Mathew et al. (2007 ▶). For ring conformation puckering parameters, see: Cremer & Pople (1975 ▶).

Experimental

Crystal data

C17H15N5O3S M = 369.40 Monoclinic, a = 7.4682 (15) Å b = 14.128 (3) Å c = 15.550 (3) Å β = 90.46 (3)° V = 1640.6 (6) Å3 Z = 4 Mo Kα radiation μ = 0.23 mm−1 T = 113 (2) K 0.20 × 0.06 × 0.04 mm

Data collection

Rigaku Saturn CCD area-detector diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku/MSC, 2005 ▶) T min = 0.956, T max = 0.991 18716 measured reflections 3620 independent reflections 3121 reflections with I > 2σ(I) R int = 0.034

Refinement

R[F 2 > 2σ(F 2)] = 0.032 wR(F 2) = 0.108 S = 1.17 3620 reflections 238 parameters H-atom parameters constrained Δρmax = 0.48 e Å−3 Δρmin = −0.41 e Å−3 Data collection: CrystalClear (Rigaku/MSC, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalStructure (Rigaku/MSC, 2005 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808019855/hk2481sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808019855/hk2481Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C17H15N5O3SF000 = 768
Mr = 369.40Dx = 1.496 Mg m3
Monoclinic, P21/cMelting point: 448K K
Hall symbol: -P 2ybcMo Kα radiation λ = 0.71073 Å
a = 7.4682 (15) ÅCell parameters from 4807 reflections
b = 14.128 (3) Åθ = 1.9–27.1º
c = 15.550 (3) ŵ = 0.23 mm1
β = 90.46 (3)ºT = 113 (2) K
V = 1640.6 (6) Å3Prism, colourless
Z = 40.20 × 0.06 × 0.04 mm
Rigaku Saturn CCD area-detector diffractometer3620 independent reflections
Radiation source: rotating anode3121 reflections with I > 2σ(I)
Monochromator: confocalRint = 0.034
Detector resolution: 7.31 pixels mm-1θmax = 27.2º
T = 113(2) Kθmin = 2.0º
φ and ω scansh = −9→9
Absorption correction: multi-scan(CrystalClear; Rigaku/MSC, 2005)k = −18→18
Tmin = 0.956, Tmax = 0.991l = −19→19
18716 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.032H-atom parameters constrained
wR(F2) = 0.108  w = 1/[σ2(Fo2) + (0.0643P)2 + 0.1727P] where P = (Fo2 + 2Fc2)/3
S = 1.17(Δ/σ)max = 0.001
3620 reflectionsΔρmax = 0.48 e Å3
238 parametersΔρmin = −0.41 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.47268 (5)0.30203 (2)0.32685 (2)0.01906 (12)
O10.09766 (15)0.49470 (8)0.82026 (7)0.0250 (3)
O2−0.02336 (14)0.65367 (8)0.74798 (7)0.0239 (3)
O30.02728 (14)0.69219 (7)0.58349 (7)0.0236 (3)
N10.46168 (17)0.25227 (9)0.50417 (8)0.0228 (3)
N20.39750 (17)0.30533 (9)0.57349 (8)0.0217 (3)
N30.36415 (15)0.39115 (8)0.45790 (8)0.0167 (3)
N40.32966 (15)0.45519 (8)0.39312 (7)0.0167 (3)
N50.32739 (18)0.61126 (9)0.16139 (9)0.0242 (3)
C10.24914 (18)0.45989 (10)0.59768 (9)0.0178 (3)
C20.18824 (19)0.54403 (10)0.56074 (9)0.0183 (3)
H20.20850.55690.50170.022*
C30.09733 (18)0.60873 (10)0.61183 (9)0.0184 (3)
C40.07026 (18)0.59006 (10)0.69890 (9)0.0186 (3)
C50.13206 (18)0.50562 (11)0.73504 (9)0.0192 (3)
C60.22174 (18)0.43975 (10)0.68450 (9)0.0189 (3)
H60.26360.38200.70870.023*
C70.1537 (2)0.40859 (12)0.85975 (10)0.0285 (4)
H7A0.09530.35510.83090.043*
H7B0.12060.40920.92060.043*
H7C0.28390.40230.85490.043*
C80.0881 (2)0.72143 (13)0.78883 (11)0.0321 (4)
H8A0.16800.68950.82980.048*
H8B0.01390.76740.81940.048*
H8C0.15960.75430.74550.048*
C90.0629 (2)0.71792 (11)0.49656 (10)0.0240 (3)
H9A0.19220.72580.48900.036*
H9B0.00190.77760.48300.036*
H9C0.01900.66810.45800.036*
C100.33868 (18)0.38808 (10)0.54526 (9)0.0176 (3)
C110.43862 (19)0.30623 (10)0.43654 (10)0.0183 (3)
C120.38009 (18)0.41649 (10)0.32131 (9)0.0166 (3)
C130.36482 (18)0.46502 (10)0.23842 (9)0.0171 (3)
C140.37053 (19)0.41517 (10)0.16155 (9)0.0207 (3)
H140.38650.34850.16140.025*
C150.3526 (2)0.46451 (11)0.08527 (10)0.0237 (3)
H150.35550.43220.03170.028*
C160.3304 (2)0.56120 (11)0.08802 (10)0.0234 (3)
H160.31660.59430.03520.028*
C170.34453 (19)0.56304 (10)0.23455 (10)0.0207 (3)
H170.34280.59730.28710.025*
U11U22U33U12U13U23
S10.0235 (2)0.01467 (19)0.0190 (2)0.00266 (13)0.00292 (15)−0.00077 (12)
O10.0308 (6)0.0273 (6)0.0169 (5)0.0015 (5)0.0062 (4)0.0028 (4)
O20.0222 (5)0.0234 (6)0.0262 (6)0.0008 (4)0.0076 (4)−0.0053 (4)
O30.0308 (6)0.0189 (5)0.0211 (6)0.0049 (4)0.0035 (5)0.0012 (4)
N10.0290 (7)0.0187 (6)0.0208 (7)0.0034 (5)0.0040 (5)0.0011 (5)
N20.0263 (7)0.0186 (6)0.0202 (7)0.0021 (5)0.0023 (5)0.0004 (5)
N30.0183 (6)0.0140 (6)0.0176 (6)0.0004 (5)0.0011 (5)0.0001 (4)
N40.0173 (6)0.0154 (6)0.0172 (6)−0.0005 (4)−0.0001 (5)0.0022 (4)
N50.0308 (7)0.0171 (6)0.0248 (7)0.0010 (5)0.0001 (6)0.0014 (5)
C10.0158 (6)0.0181 (7)0.0194 (7)−0.0026 (5)0.0001 (6)−0.0021 (5)
C20.0194 (7)0.0192 (7)0.0162 (7)−0.0024 (5)0.0011 (5)−0.0001 (5)
C30.0167 (7)0.0165 (7)0.0218 (7)−0.0020 (5)−0.0009 (6)−0.0013 (5)
C40.0161 (6)0.0196 (7)0.0202 (7)−0.0029 (5)0.0042 (6)−0.0042 (6)
C50.0180 (7)0.0230 (7)0.0167 (7)−0.0054 (6)0.0021 (6)−0.0008 (6)
C60.0176 (7)0.0187 (7)0.0206 (7)−0.0019 (6)−0.0003 (6)−0.0001 (5)
C70.0331 (9)0.0328 (9)0.0195 (8)0.0028 (7)0.0024 (7)0.0065 (7)
C80.0359 (9)0.0312 (9)0.0293 (9)0.0037 (7)−0.0016 (7)−0.0147 (7)
C90.0274 (8)0.0205 (7)0.0240 (8)0.0011 (6)0.0009 (6)0.0031 (6)
C100.0180 (7)0.0184 (7)0.0163 (7)−0.0036 (5)0.0005 (5)0.0005 (5)
C110.0187 (7)0.0148 (7)0.0214 (7)0.0004 (5)0.0022 (6)−0.0008 (5)
C120.0162 (6)0.0135 (6)0.0200 (7)−0.0012 (5)0.0007 (5)−0.0013 (5)
C130.0150 (6)0.0171 (7)0.0192 (7)−0.0009 (5)0.0022 (5)0.0003 (5)
C140.0238 (7)0.0159 (7)0.0225 (7)−0.0009 (6)0.0032 (6)−0.0014 (5)
C150.0269 (8)0.0243 (8)0.0199 (7)−0.0032 (6)0.0035 (6)−0.0020 (6)
C160.0249 (7)0.0254 (8)0.0200 (7)−0.0010 (6)0.0000 (6)0.0048 (6)
C170.0247 (7)0.0169 (7)0.0205 (7)0.0009 (6)−0.0004 (6)−0.0023 (5)
S1—C111.7275 (15)C3—C41.396 (2)
S1—C121.7606 (14)C4—C51.396 (2)
O1—C51.3607 (17)C5—C61.393 (2)
O1—C71.4242 (19)C6—H60.9500
O2—C41.3739 (17)C7—H7A0.9800
O2—C81.416 (2)C7—H7B0.9800
O3—C31.3616 (17)C7—H7C0.9800
O3—C91.4269 (18)C8—H8A0.9800
N1—C111.3092 (19)C8—H8B0.9800
N1—N21.4007 (17)C8—H8C0.9800
N2—C101.3225 (19)C9—H9A0.9800
N3—C111.3645 (18)C9—H9B0.9800
N3—C101.3739 (18)C9—H9C0.9800
N3—N41.3767 (16)C12—C131.4637 (19)
N4—C121.3016 (18)C13—C141.388 (2)
N5—C171.331 (2)C13—C171.394 (2)
N5—C161.343 (2)C14—C151.381 (2)
C1—C21.395 (2)C14—H140.9500
C1—C61.396 (2)C15—C161.377 (2)
C1—C101.466 (2)C15—H150.9500
C2—C31.392 (2)C16—H160.9500
C2—H20.9500C17—H170.9500
C11—S1—C1287.47 (7)O2—C8—H8B109.5
C5—O1—C7117.36 (12)H8A—C8—H8B109.5
C4—O2—C8113.05 (11)O2—C8—H8C109.5
C3—O3—C9116.95 (11)H8A—C8—H8C109.5
C11—N1—N2105.24 (12)H8B—C8—H8C109.5
C10—N2—N1109.42 (12)O3—C9—H9A109.5
C11—N3—C10105.84 (12)O3—C9—H9B109.5
C11—N3—N4118.28 (12)H9A—C9—H9B109.5
C10—N3—N4135.86 (12)O3—C9—H9C109.5
C12—N4—N3107.34 (11)H9A—C9—H9C109.5
C17—N5—C16117.03 (13)H9B—C9—H9C109.5
C2—C1—C6121.46 (13)N2—C10—N3107.93 (12)
C2—C1—C10120.62 (13)N2—C10—C1125.37 (13)
C6—C1—C10117.88 (13)N3—C10—C1126.53 (13)
C3—C2—C1118.93 (13)N1—C11—N3111.57 (13)
C3—C2—H2120.5N1—C11—S1138.90 (12)
C1—C2—H2120.5N3—C11—S1109.52 (10)
O3—C3—C2124.89 (13)N4—C12—C13122.53 (13)
O3—C3—C4114.79 (13)N4—C12—S1117.39 (11)
C2—C3—C4120.32 (13)C13—C12—S1120.07 (10)
O2—C4—C5120.23 (13)C14—C13—C17118.08 (14)
O2—C4—C3119.58 (13)C14—C13—C12121.19 (13)
C5—C4—C3120.15 (13)C17—C13—C12120.72 (13)
O1—C5—C6124.69 (14)C15—C14—C13118.68 (14)
O1—C5—C4115.13 (12)C15—C14—H14120.7
C6—C5—C4120.18 (13)C13—C14—H14120.7
C5—C6—C1118.96 (14)C16—C15—C14119.00 (14)
C5—C6—H6120.5C16—C15—H15120.5
C1—C6—H6120.5C14—C15—H15120.5
O1—C7—H7A109.5N5—C16—C15123.50 (14)
O1—C7—H7B109.5N5—C16—H16118.3
H7A—C7—H7B109.5C15—C16—H16118.3
O1—C7—H7C109.5N5—C17—C13123.69 (14)
H7A—C7—H7C109.5N5—C17—H17118.2
H7B—C7—H7C109.5C13—C17—H17118.2
O2—C8—H8A109.5
C11—N1—N2—C100.12 (16)N4—N3—C10—C13.5 (2)
C11—N3—N4—C120.04 (16)C2—C1—C10—N2−178.36 (14)
C10—N3—N4—C12−178.10 (15)C6—C1—C10—N2−0.5 (2)
C6—C1—C2—C3−0.4 (2)C2—C1—C10—N3−3.7 (2)
C10—C1—C2—C3177.37 (13)C6—C1—C10—N3174.15 (13)
C9—O3—C3—C2−5.2 (2)N2—N1—C11—N30.27 (16)
C9—O3—C3—C4175.44 (12)N2—N1—C11—S1−179.02 (14)
C1—C2—C3—O3−178.33 (13)C10—N3—C11—N1−0.54 (16)
C1—C2—C3—C41.0 (2)N4—N3—C11—N1−179.19 (12)
C8—O2—C4—C590.63 (17)C10—N3—C11—S1178.96 (9)
C8—O2—C4—C3−91.79 (17)N4—N3—C11—S10.31 (15)
O3—C3—C4—O20.86 (19)C12—S1—C11—N1178.89 (18)
C2—C3—C4—O2−178.51 (13)C12—S1—C11—N3−0.40 (10)
O3—C3—C4—C5178.45 (13)N3—N4—C12—C13−179.41 (12)
C2—C3—C4—C5−0.9 (2)N3—N4—C12—S1−0.38 (14)
C7—O1—C5—C6−1.6 (2)C11—S1—C12—N40.48 (11)
C7—O1—C5—C4178.36 (13)C11—S1—C12—C13179.54 (12)
O2—C4—C5—O1−2.16 (19)N4—C12—C13—C14−161.57 (13)
C3—C4—C5—O1−179.73 (12)S1—C12—C13—C1419.42 (18)
O2—C4—C5—C6177.85 (13)N4—C12—C13—C1718.6 (2)
C3—C4—C5—C60.3 (2)S1—C12—C13—C17−160.41 (11)
O1—C5—C6—C1−179.70 (13)C17—C13—C14—C15−1.2 (2)
C4—C5—C6—C10.3 (2)C12—C13—C14—C15178.97 (13)
C2—C1—C6—C5−0.2 (2)C13—C14—C15—C160.3 (2)
C10—C1—C6—C5−178.05 (13)C17—N5—C16—C15−0.9 (2)
N1—N2—C10—N3−0.46 (16)C14—C15—C16—N50.9 (2)
N1—N2—C10—C1175.04 (13)C16—N5—C17—C13−0.1 (2)
C11—N3—C10—N20.60 (15)C14—C13—C17—N51.1 (2)
N4—N3—C10—N2178.89 (14)C12—C13—C17—N5−179.02 (13)
C11—N3—C10—C1−174.83 (13)
D—H···AD—HH···AD···AD—H···A
C2—H2···N40.952.403.0869 (19)129
C9—H9A···N1i0.982.603.576 (2)171
C8—H8C···N5ii0.982.633.573 (2)161
C14—H14···N2iii0.952.573.410 (2)148
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C2—H2⋯N40.952.403.0869 (19)129
C9—H9A⋯N1i0.982.603.576 (2)171
C8—H8C⋯N5ii0.982.633.573 (2)161
C14—H14⋯N2iii0.952.573.410 (2)148

Symmetry codes: (i) ; (ii) ; (iii) .

  3 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Studies on synthesis and pharmacological activities of 3,6-disubstituted-1,2,4-triazolo[3,4-b]-1,3,4-thiadiazoles and their dihydro analogues.

Authors:  Vinod Mathew; J Keshavayya; V P Vaidya; D Giles
Journal:  Eur J Med Chem       Date:  2007-01-09       Impact factor: 6.514

3.  Synthesis and antimicrobial activities of some novel 1,2,4-triazolo[3,4-b]-1,3,4-thiadiazoles and 1,2,4-triazolo[3,4-b]-1,3,4-thiadiazines carrying thioalkyl and sulphonyl phenoxy moieties.

Authors:  T Karabasanagouda; Airody Vasudeva Adhikari; N Suchetha Shetty
Journal:  Eur J Med Chem       Date:  2006-12-06       Impact factor: 6.514

  3 in total
  2 in total

1.  3-Methyl-6-trichloro-methyl-1,2,4-triazolo[3,4-b][1,3,4]thia-diazole.

Authors:  Wei-Min Jia; Zhi-Jian Wang; Xiao-Yu Jia; Jing-Jing Zhang; Wei Wang
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2011-04-13

2.  Structural and Energetic Properties of Weak Noncovalent Interactions in Two Closely Related 3,6-Disubstituted-[1,2,4]triazolo[3,4-b][1,3,4]thiadiazole Derivatives: In Vitro Cyclooxygenase Activity, Crystallography, and Computational Investigations.

Authors:  Lamya H Al-Wahaibi; Sekar Karthikeyan; Olivier Blacque; Amal A El-Masry; Hanan M Hassan; M Judith Percino; Ali A El-Emam; Subbiah Thamotharan
Journal:  ACS Omega       Date:  2022-09-16
  2 in total

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