| Literature DB >> 21203083 |
Bing-Yu Zhang1, Jing-Jing Nie, Duan-Jun Xu.
Abstract
In the title compound, [Co(C(8)H(4)O(7)S)(C(12)H(8)N(2))(H(2)O)(3)]·H(2)O, the Co(II) cation is coordinated by one sulfoisophthalate dianion, one bidentate phenathroline (phen) mol-ecule and three water mol-ecules in a distorted cis-CoN(2)O(4) octa-hedral geometry. In the crystal structure, aromatic π-π stacking occurs [centroid-centroid distances 3.7630 (14) and 3.7269 (15) Å], as well as an extensive O-H⋯O and C-H⋯O hydrogen-bonding network.Entities:
Year: 2008 PMID: 21203083 PMCID: PMC2961914 DOI: 10.1107/S1600536808019843
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Co(C8H4O7S)(C12H8N2)(H2O)3]·H2O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 6846 reflections |
| θ = 2.0–25.0º | |
| µ = 0.91 mm−1 | |
| β = 109.645 (14)º | Prism, red |
| 0.36 × 0.24 × 0.20 mm | |
| Rigaku R-AXIS RAPID IP diffractometer | 4490 independent reflections |
| Radiation source: fine-focus sealed tube | 3416 reflections with |
| Monochromator: graphite | |
| Detector resolution: 10.0 pixels mm-1 | θmax = 26.0º |
| θmin = 2.0º | |
| ω scans | |
| Absorption correction: multi-scan(ABSCOR; Higashi, 1995) | |
| 25103 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 4490 reflections | Δρmax = 0.40 e Å−3 |
| 316 parameters | Δρmin = −0.28 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Co | 0.32537 (3) | 0.13651 (2) | 0.35952 (2) | 0.03134 (12) | |
| S | 0.05040 (5) | 0.06815 (4) | 0.78134 (4) | 0.03161 (16) | |
| N1 | 0.52786 (18) | 0.12769 (13) | 0.38882 (13) | 0.0321 (4) | |
| N2 | 0.3431 (2) | 0.14723 (15) | 0.22955 (13) | 0.0387 (5) | |
| O1 | 0.32643 (15) | 0.12435 (12) | 0.48995 (11) | 0.0367 (4) | |
| O2 | 0.11757 (17) | 0.14036 (17) | 0.47225 (13) | 0.0674 (7) | |
| O3 | 0.63866 (15) | 0.09338 (13) | 0.80484 (11) | 0.0418 (4) | |
| O4 | 0.55844 (17) | 0.09929 (17) | 0.91585 (12) | 0.0585 (6) | |
| H4A | 0.6392 | 0.0966 | 0.9595 | 0.088* | |
| O5 | 0.30048 (15) | −0.01239 (12) | 0.33733 (11) | 0.0386 (4) | |
| H5A | 0.2252 | −0.0345 | 0.3241 | 0.058* | |
| H5B | 0.3245 | −0.0352 | 0.2950 | 0.058* | |
| O6 | 0.35517 (15) | 0.28948 (12) | 0.38099 (11) | 0.0388 (4) | |
| H6A | 0.2923 | 0.3108 | 0.3420 | 0.058* | |
| H6B | 0.4197 | 0.3111 | 0.3694 | 0.058* | |
| O7 | 0.12326 (15) | 0.16385 (12) | 0.31242 (11) | 0.0405 (4) | |
| H7A | 0.1099 | 0.1588 | 0.3629 | 0.061* | |
| H7B | 0.0742 | 0.1278 | 0.2734 | 0.061* | |
| O11 | 0.05105 (16) | −0.03233 (12) | 0.80684 (11) | 0.0435 (4) | |
| O12 | 0.07483 (16) | 0.13193 (13) | 0.85730 (12) | 0.0444 (5) | |
| O13 | −0.06484 (15) | 0.09361 (14) | 0.70756 (12) | 0.0465 (5) | |
| O1W | 0.7986 (2) | 0.1114 (2) | 1.02278 (15) | 0.0893 (9) | |
| H1A | 0.8596 | 0.1380 | 0.9985 | 0.134* | |
| H1B | 0.8576 | 0.0794 | 1.0741 | 0.134* | |
| C1 | 0.6184 (2) | 0.11688 (18) | 0.46861 (17) | 0.0395 (6) | |
| H1 | 0.5929 | 0.1065 | 0.5181 | 0.047* | |
| C2 | 0.7504 (3) | 0.12047 (19) | 0.4809 (2) | 0.0488 (7) | |
| H2 | 0.8108 | 0.1121 | 0.5377 | 0.059* | |
| C3 | 0.7901 (2) | 0.13620 (18) | 0.4096 (2) | 0.0482 (7) | |
| H3 | 0.8777 | 0.1396 | 0.4175 | 0.058* | |
| C4 | 0.6977 (2) | 0.14729 (16) | 0.32399 (19) | 0.0393 (6) | |
| C5 | 0.7295 (3) | 0.16124 (19) | 0.2445 (2) | 0.0497 (7) | |
| H5 | 0.8156 | 0.1661 | 0.2486 | 0.060* | |
| C6 | 0.6364 (3) | 0.16742 (19) | 0.1640 (2) | 0.0527 (8) | |
| H6 | 0.6597 | 0.1761 | 0.1134 | 0.063* | |
| C7 | 0.5023 (3) | 0.16096 (18) | 0.15414 (18) | 0.0446 (7) | |
| C8 | 0.4010 (3) | 0.1641 (2) | 0.07230 (19) | 0.0596 (8) | |
| H8 | 0.4191 | 0.1708 | 0.0194 | 0.071* | |
| C9 | 0.2766 (3) | 0.1574 (2) | 0.0696 (2) | 0.0637 (9) | |
| H9 | 0.2094 | 0.1578 | 0.0151 | 0.076* | |
| C10 | 0.2509 (3) | 0.1500 (2) | 0.14981 (19) | 0.0537 (8) | |
| H10 | 0.1653 | 0.1468 | 0.1473 | 0.064* | |
| C11 | 0.4678 (2) | 0.15056 (17) | 0.23164 (17) | 0.0349 (6) | |
| C12 | 0.5665 (2) | 0.14201 (16) | 0.31698 (16) | 0.0323 (5) | |
| C13 | 0.2328 (2) | 0.12619 (17) | 0.51846 (16) | 0.0348 (6) | |
| C14 | 0.2602 (2) | 0.10967 (16) | 0.61750 (15) | 0.0305 (5) | |
| C15 | 0.1576 (2) | 0.09694 (17) | 0.64978 (16) | 0.0320 (5) | |
| H15 | 0.0731 | 0.0971 | 0.6102 | 0.038* | |
| C16 | 0.1814 (2) | 0.08409 (16) | 0.74032 (15) | 0.0293 (5) | |
| C17 | 0.3073 (2) | 0.08407 (16) | 0.80040 (16) | 0.0317 (5) | |
| H17 | 0.3226 | 0.0759 | 0.8613 | 0.038* | |
| C18 | 0.4098 (2) | 0.09629 (17) | 0.76915 (15) | 0.0312 (5) | |
| C19 | 0.3862 (2) | 0.10878 (17) | 0.67763 (16) | 0.0313 (5) | |
| H19 | 0.4551 | 0.1165 | 0.6567 | 0.038* | |
| C20 | 0.5461 (2) | 0.09713 (18) | 0.83179 (16) | 0.0351 (6) |
| Co | 0.02507 (18) | 0.0439 (2) | 0.0262 (2) | −0.00116 (13) | 0.01016 (14) | 0.00125 (14) |
| S | 0.0246 (3) | 0.0425 (3) | 0.0300 (3) | −0.0027 (2) | 0.0122 (3) | −0.0003 (3) |
| N1 | 0.0287 (10) | 0.0399 (11) | 0.0287 (11) | 0.0004 (8) | 0.0110 (9) | 0.0012 (9) |
| N2 | 0.0379 (12) | 0.0501 (13) | 0.0271 (12) | 0.0012 (10) | 0.0095 (10) | 0.0028 (9) |
| O1 | 0.0289 (9) | 0.0581 (11) | 0.0255 (9) | 0.0008 (7) | 0.0122 (7) | 0.0025 (8) |
| O2 | 0.0307 (10) | 0.141 (2) | 0.0324 (11) | 0.0098 (11) | 0.0125 (9) | 0.0141 (12) |
| O3 | 0.0264 (9) | 0.0628 (11) | 0.0378 (10) | −0.0036 (8) | 0.0130 (8) | −0.0111 (9) |
| O4 | 0.0326 (10) | 0.1136 (17) | 0.0280 (10) | −0.0016 (11) | 0.0086 (8) | −0.0058 (11) |
| O5 | 0.0324 (9) | 0.0489 (10) | 0.0370 (10) | −0.0058 (7) | 0.0149 (8) | −0.0054 (8) |
| O6 | 0.0271 (8) | 0.0478 (10) | 0.0438 (10) | 0.0009 (7) | 0.0149 (8) | 0.0058 (8) |
| O7 | 0.0306 (9) | 0.0577 (11) | 0.0318 (10) | −0.0018 (8) | 0.0085 (8) | −0.0016 (8) |
| O11 | 0.0412 (10) | 0.0457 (10) | 0.0476 (11) | −0.0046 (8) | 0.0205 (9) | 0.0054 (9) |
| O12 | 0.0374 (10) | 0.0588 (12) | 0.0421 (11) | −0.0031 (8) | 0.0200 (9) | −0.0150 (9) |
| O13 | 0.0248 (9) | 0.0721 (13) | 0.0401 (11) | −0.0009 (8) | 0.0077 (8) | 0.0100 (9) |
| O1W | 0.0410 (12) | 0.174 (3) | 0.0463 (14) | −0.0109 (14) | 0.0059 (10) | 0.0314 (15) |
| C1 | 0.0319 (13) | 0.0495 (15) | 0.0355 (15) | 0.0006 (11) | 0.0093 (12) | 0.0020 (12) |
| C2 | 0.0343 (14) | 0.0544 (17) | 0.0490 (18) | 0.0024 (12) | 0.0025 (13) | 0.0004 (14) |
| C3 | 0.0264 (13) | 0.0477 (16) | 0.071 (2) | 0.0014 (11) | 0.0164 (14) | −0.0012 (14) |
| C4 | 0.0380 (14) | 0.0310 (13) | 0.0588 (18) | 0.0015 (10) | 0.0291 (14) | 0.0002 (12) |
| C5 | 0.0503 (17) | 0.0424 (16) | 0.072 (2) | 0.0004 (13) | 0.0416 (17) | −0.0008 (14) |
| C6 | 0.077 (2) | 0.0411 (15) | 0.064 (2) | 0.0034 (14) | 0.0561 (19) | 0.0034 (14) |
| C7 | 0.0640 (19) | 0.0398 (15) | 0.0406 (16) | 0.0052 (13) | 0.0316 (15) | 0.0040 (12) |
| C8 | 0.089 (3) | 0.063 (2) | 0.0345 (17) | 0.0117 (18) | 0.0306 (17) | 0.0098 (14) |
| C9 | 0.078 (2) | 0.078 (2) | 0.0265 (16) | 0.0079 (18) | 0.0057 (16) | 0.0064 (15) |
| C10 | 0.0482 (17) | 0.072 (2) | 0.0343 (16) | 0.0018 (15) | 0.0059 (14) | 0.0050 (14) |
| C11 | 0.0438 (15) | 0.0335 (13) | 0.0340 (14) | 0.0020 (10) | 0.0217 (12) | 0.0021 (10) |
| C12 | 0.0350 (13) | 0.0287 (12) | 0.0389 (15) | −0.0009 (10) | 0.0199 (12) | −0.0017 (10) |
| C13 | 0.0285 (13) | 0.0493 (15) | 0.0285 (13) | −0.0020 (11) | 0.0123 (11) | 0.0011 (11) |
| C14 | 0.0306 (12) | 0.0347 (12) | 0.0286 (13) | −0.0025 (10) | 0.0132 (11) | −0.0027 (10) |
| C15 | 0.0261 (12) | 0.0389 (13) | 0.0317 (13) | −0.0010 (10) | 0.0108 (10) | −0.0026 (11) |
| C16 | 0.0277 (12) | 0.0329 (12) | 0.0305 (13) | −0.0019 (9) | 0.0139 (10) | −0.0022 (10) |
| C17 | 0.0305 (12) | 0.0397 (14) | 0.0276 (13) | −0.0024 (10) | 0.0134 (11) | −0.0007 (10) |
| C18 | 0.0287 (12) | 0.0345 (12) | 0.0298 (13) | −0.0038 (10) | 0.0089 (10) | −0.0022 (10) |
| C19 | 0.0270 (12) | 0.0401 (13) | 0.0320 (13) | −0.0019 (10) | 0.0166 (10) | −0.0016 (11) |
| C20 | 0.0269 (12) | 0.0452 (14) | 0.0328 (14) | −0.0028 (11) | 0.0096 (11) | −0.0012 (11) |
| Co—O1 | 2.0730 (16) | C2—C3 | 1.361 (4) |
| Co—O5 | 2.1070 (17) | C2—H2 | 0.9300 |
| Co—O6 | 2.1663 (17) | C3—C4 | 1.405 (4) |
| Co—O7 | 2.1277 (16) | C3—H3 | 0.9300 |
| Co—N1 | 2.1198 (19) | C4—C12 | 1.411 (3) |
| Co—N2 | 2.141 (2) | C4—C5 | 1.431 (4) |
| S—O11 | 1.4569 (18) | C5—C6 | 1.345 (4) |
| S—O12 | 1.4482 (18) | C5—H5 | 0.9300 |
| S—O13 | 1.4509 (17) | C6—C7 | 1.432 (4) |
| S—C16 | 1.783 (2) | C6—H6 | 0.9300 |
| N1—C1 | 1.330 (3) | C7—C8 | 1.399 (4) |
| N1—C12 | 1.359 (3) | C7—C11 | 1.411 (3) |
| N2—C10 | 1.330 (3) | C8—C9 | 1.357 (4) |
| N2—C11 | 1.361 (3) | C8—H8 | 0.9300 |
| O1—C13 | 1.257 (3) | C9—C10 | 1.398 (4) |
| O2—C13 | 1.248 (3) | C9—H9 | 0.9300 |
| O3—C20 | 1.231 (3) | C10—H10 | 0.9300 |
| O4—C20 | 1.295 (3) | C11—C12 | 1.428 (3) |
| O4—H4A | 0.9257 | C13—C14 | 1.515 (3) |
| O5—H5A | 0.8416 | C14—C19 | 1.393 (3) |
| O5—H5B | 0.8608 | C14—C15 | 1.399 (3) |
| O6—H6A | 0.8129 | C15—C16 | 1.383 (3) |
| O6—H6B | 0.8463 | C15—H15 | 0.9300 |
| O7—H7A | 0.8645 | C16—C17 | 1.392 (3) |
| O7—H7B | 0.8385 | C17—C18 | 1.386 (3) |
| O1W—H1A | 0.9530 | C17—H17 | 0.9300 |
| O1W—H1B | 0.9630 | C18—C19 | 1.398 (3) |
| C1—C2 | 1.399 (4) | C18—C20 | 1.495 (3) |
| C1—H1 | 0.9300 | C19—H19 | 0.9300 |
| O1—Co—O5 | 92.48 (6) | C12—C4—C5 | 118.9 (3) |
| O1—Co—N1 | 97.09 (7) | C6—C5—C4 | 120.8 (3) |
| O5—Co—N1 | 92.72 (7) | C6—C5—H5 | 119.6 |
| O1—Co—O7 | 91.14 (6) | C4—C5—H5 | 119.6 |
| O5—Co—O7 | 93.21 (6) | C5—C6—C7 | 121.8 (3) |
| N1—Co—O7 | 169.64 (7) | C5—C6—H6 | 119.1 |
| O1—Co—N2 | 174.74 (7) | C7—C6—H6 | 119.1 |
| O5—Co—N2 | 87.51 (7) | C8—C7—C11 | 116.7 (3) |
| N1—Co—N2 | 77.66 (8) | C8—C7—C6 | 124.7 (3) |
| O7—Co—N2 | 94.11 (7) | C11—C7—C6 | 118.7 (3) |
| O1—Co—O6 | 88.49 (6) | C9—C8—C7 | 120.5 (3) |
| O5—Co—O6 | 178.49 (6) | C9—C8—H8 | 119.8 |
| N1—Co—O6 | 86.00 (6) | C7—C8—H8 | 119.8 |
| O7—Co—O6 | 87.93 (6) | C8—C9—C10 | 119.1 (3) |
| N2—Co—O6 | 91.43 (7) | C8—C9—H9 | 120.4 |
| O12—S—O13 | 112.88 (11) | C10—C9—H9 | 120.4 |
| O12—S—O11 | 112.12 (11) | N2—C10—C9 | 123.1 (3) |
| O13—S—O11 | 112.37 (11) | N2—C10—H10 | 118.5 |
| O12—S—C16 | 106.31 (11) | C9—C10—H10 | 118.5 |
| O13—S—C16 | 105.58 (11) | N2—C11—C7 | 123.1 (2) |
| O11—S—C16 | 106.98 (10) | N2—C11—C12 | 117.3 (2) |
| C1—N1—C12 | 118.0 (2) | C7—C11—C12 | 119.6 (2) |
| C1—N1—Co | 127.59 (17) | N1—C12—C4 | 122.8 (2) |
| C12—N1—Co | 114.17 (15) | N1—C12—C11 | 117.1 (2) |
| C10—N2—C11 | 117.5 (2) | C4—C12—C11 | 120.1 (2) |
| C10—N2—Co | 129.16 (19) | O2—C13—O1 | 125.8 (2) |
| C11—N2—Co | 113.33 (16) | O2—C13—C14 | 116.3 (2) |
| C13—O1—Co | 128.88 (16) | O1—C13—C14 | 118.0 (2) |
| C20—O4—H4A | 120.8 | C19—C14—C15 | 119.1 (2) |
| Co—O5—H5A | 117.7 | C19—C14—C13 | 121.1 (2) |
| Co—O5—H5B | 116.0 | C15—C14—C13 | 119.7 (2) |
| H5A—O5—H5B | 101.8 | C16—C15—C14 | 120.2 (2) |
| Co—O6—H6A | 101.2 | C16—C15—H15 | 119.9 |
| Co—O6—H6B | 114.2 | C14—C15—H15 | 119.9 |
| H6A—O6—H6B | 105.4 | C15—C16—C17 | 120.6 (2) |
| Co—O7—H7A | 98.2 | C15—C16—S | 120.11 (17) |
| Co—O7—H7B | 119.3 | C17—C16—S | 119.32 (17) |
| H7A—O7—H7B | 111.6 | C18—C17—C16 | 119.7 (2) |
| H1A—O1W—H1B | 99.1 | C18—C17—H17 | 120.1 |
| N1—C1—C2 | 122.5 (2) | C16—C17—H17 | 120.1 |
| N1—C1—H1 | 118.7 | C17—C18—C19 | 119.9 (2) |
| C2—C1—H1 | 118.7 | C17—C18—C20 | 121.2 (2) |
| C3—C2—C1 | 119.8 (3) | C19—C18—C20 | 119.0 (2) |
| C3—C2—H2 | 120.1 | C14—C19—C18 | 120.5 (2) |
| C1—C2—H2 | 120.1 | C14—C19—H19 | 119.8 |
| C2—C3—C4 | 119.5 (2) | C18—C19—H19 | 119.8 |
| C2—C3—H3 | 120.3 | O3—C20—O4 | 123.1 (2) |
| C4—C3—H3 | 120.3 | O3—C20—C18 | 122.0 (2) |
| C3—C4—C12 | 117.3 (2) | O4—C20—C18 | 114.8 (2) |
| C3—C4—C5 | 123.8 (2) |
| H··· | ||||
| O1W—H1A···O6i | 0.95 | 2.11 | 2.881 (3) | 137 |
| O1W—H1B···O11ii | 0.96 | 1.93 | 2.873 (3) | 165 |
| O4—H4A···O1W | 0.93 | 1.71 | 2.621 (3) | 166 |
| O5—H5A···O13iii | 0.84 | 1.86 | 2.695 (3) | 175 |
| O5—H5B···O3iv | 0.86 | 1.94 | 2.798 (2) | 174 |
| O6—H6A···O3v | 0.81 | 2.08 | 2.803 (2) | 149 |
| O6—H6B···O12vi | 0.85 | 1.95 | 2.790 (3) | 173 |
| O7—H7A···O2 | 0.86 | 1.73 | 2.579 (3) | 168 |
| O7—H7B···O11iii | 0.84 | 2.03 | 2.859 (2) | 172 |
| C1—H1···O5iv | 0.93 | 2.56 | 3.249 (3) | 131 |
| C2—H2···O13vii | 0.93 | 2.59 | 3.506 (4) | 167 |
| C3—H3···O2vii | 0.93 | 2.48 | 3.399 (3) | 168 |
| C6—H6···O1Wviii | 0.93 | 2.59 | 3.391 (4) | 145 |
| C9—H9···O12viii | 0.93 | 2.47 | 3.373 (4) | 164 |
Selected bond lengths (Å)
| Co—O1 | 2.0730 (16) |
| Co—O5 | 2.1070 (17) |
| Co—O6 | 2.1663 (17) |
| Co—O7 | 2.1277 (16) |
| Co—N1 | 2.1198 (19) |
| Co—N2 | 2.141 (2) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1 | 0.95 | 2.11 | 2.881 (3) | 137 |
| O1 | 0.96 | 1.93 | 2.873 (3) | 165 |
| O4—H4 | 0.93 | 1.71 | 2.621 (3) | 166 |
| O5—H5 | 0.84 | 1.86 | 2.695 (3) | 175 |
| O5—H5 | 0.86 | 1.94 | 2.798 (2) | 174 |
| O6—H6 | 0.81 | 2.08 | 2.803 (2) | 149 |
| O6—H6 | 0.85 | 1.95 | 2.790 (3) | 173 |
| O7—H7 | 0.86 | 1.73 | 2.579 (3) | 168 |
| O7—H7 | 0.84 | 2.03 | 2.859 (2) | 172 |
| C1—H1⋯O5iv | 0.93 | 2.56 | 3.249 (3) | 131 |
| C2—H2⋯O13vii | 0.93 | 2.59 | 3.506 (4) | 167 |
| C3—H3⋯O2vii | 0.93 | 2.48 | 3.399 (3) | 168 |
| C6—H6⋯O1 | 0.93 | 2.59 | 3.391 (4) | 145 |
| C9—H9⋯O12viii | 0.93 | 2.47 | 3.373 (4) | 164 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) ; (vii) ; (viii) .