Literature DB >> 21203049

cis-Aqua-bis(2,4-dichloro-6-formyl-phenolato-κO,O')(N,N-dimethyl-formamide-κO)nickel(II).

Fa-Yun Chen, Shu-Hua Zhang, Chen-Min Ge.   

Abstract

In the title compound, [Ni(C(7)H(3)Cl(2)O(2))(2)(C(3)H(7)NO)(H(2)O)], the Ni(II) ion is coordinated by four O atoms from two bidentate 2,4-dichloro-6-formyl-phenolate ligands, one O atom from a water ligand and one O atom from a dimethyl-formamide ligand in a slightly distorted octa-hedral environment. In the crystal structure, centrosymmetric dimers are formed though O-H⋯O and O-H⋯Cl hydrogen bonds; π-π stacking inter-actions, with a centroid-centroid distance of 3.796 (2) Å, are also found.

Entities:  

Year:  2008        PMID: 21203049      PMCID: PMC2961979          DOI: 10.1107/S1600536808022939

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Cohen et al. (1964 ▶); Desiraju (1989 ▶); Mathews & Manohar (1991 ▶); Zaman et al. (2004 ▶); Zhang et al. (2007 ▶); Zordan et al. (2005 ▶).

Experimental

Crystal data

[Ni(C7H3Cl2O2)2(C3H7NO)(H2O)] M = 529.81 Monoclinic, a = 10.404 (2) Å b = 9.6130 (19) Å c = 22.161 (4) Å β = 92.44 (3)° V = 2214.4 (8) Å3 Z = 4 Mo Kα radiation μ = 1.39 mm−1 T = 293 (2) K 0.48 × 0.40 × 0.35 mm

Data collection

Bruker SMART CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▶) T min = 0.555, T max = 0.642 10765 measured reflections 3969 independent reflections 3010 reflections with I > 2σ(I) R int = 0.036

Refinement

R[F 2 > 2σ(F 2)] = 0.042 wR(F 2) = 0.111 S = 1.07 3969 reflections 266 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.59 e Å−3 Δρmin = −0.37 e Å−3 Data collection: SMART (Bruker, 2004 ▶); cell refinement: SAINT (Bruker, 2004 ▶); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808022939/lh2644sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808022939/lh2644Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Ni(C7H3Cl2O2)2(C3H7N1O1)(H2O1)]F000 = 1072
Mr = 529.81Dx = 1.589 Mg m3
Monoclinic, P21/cMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ybcCell parameters from 3969 reflections
a = 10.404 (2) Åθ = 1.8–25.2º
b = 9.6130 (19) ŵ = 1.39 mm1
c = 22.161 (4) ÅT = 293 (2) K
β = 92.44 (3)ºBlock, green
V = 2214.4 (8) Å30.48 × 0.40 × 0.35 mm
Z = 4
Bruker SMART CCD diffractometer3969 independent reflections
Radiation source: fine-focus sealed tube3010 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.036
Detector resolution: 0 pixels mm-1θmax = 25.2º
T = 293(2) Kθmin = 1.8º
ω scansh = −12→12
Absorption correction: multi-scan(SADABS; Sheldrick, 1996)k = −11→11
Tmin = 0.555, Tmax = 0.642l = −23→26
10765 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.042H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.111  w = 1/[σ2(Fo2) + (0.0455P)2 + 2.189P] where P = (Fo2 + 2Fc2)/3
S = 1.07(Δ/σ)max < 0.001
3969 reflectionsΔρmax = 0.59 e Å3
266 parametersΔρmin = −0.37 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger.
xyzUiso*/Ueq
Ni10.20449 (4)0.95403 (5)0.46317 (2)0.03298 (15)
Cl3−0.19959 (10)0.74563 (12)0.37793 (5)0.0551 (3)
Cl10.04788 (11)0.62415 (13)0.61561 (5)0.0620 (3)
Cl4−0.17775 (12)1.10954 (17)0.18744 (5)0.0754 (4)
Cl20.48052 (13)0.70149 (19)0.75310 (6)0.0915 (5)
O20.3577 (2)1.0446 (3)0.51032 (11)0.0395 (6)
O10.1544 (2)0.8520 (3)0.53947 (10)0.0363 (6)
O40.2662 (2)1.0551 (3)0.38720 (11)0.0439 (7)
O60.1041 (2)1.1430 (3)0.48293 (13)0.0384 (6)
H6A0.02721.13320.47430.058*
O30.0510 (2)0.8740 (3)0.41437 (10)0.0374 (6)
O50.3235 (2)0.7792 (3)0.44247 (12)0.0437 (7)
C10.2302 (3)0.8212 (4)0.58538 (15)0.0335 (8)
C70.4025 (3)1.0013 (4)0.55949 (17)0.0393 (9)
H7A0.47751.04440.57420.047*
C80.0074 (3)0.9226 (4)0.36312 (16)0.0335 (8)
C9−0.1159 (3)0.8770 (4)0.33844 (16)0.0381 (9)
C50.4263 (4)0.8523 (5)0.64989 (17)0.0485 (11)
H5A0.50370.89810.65840.058*
C11−0.1049 (4)1.0351 (5)0.25254 (17)0.0491 (11)
C40.3865 (4)0.7480 (5)0.68905 (18)0.0536 (12)
C130.0725 (4)1.0237 (4)0.32556 (16)0.0405 (9)
C120.0161 (4)1.0781 (5)0.27125 (17)0.0491 (11)
H12A0.06041.14220.24860.059*
C60.3515 (3)0.8893 (4)0.59776 (16)0.0363 (9)
C30.2688 (4)0.6781 (5)0.67818 (19)0.0531 (11)
H3A0.24230.60930.70440.064*
C140.2000 (4)1.0767 (4)0.34105 (18)0.0456 (10)
H14A0.23601.13410.31250.055*
C10−0.1696 (4)0.9316 (4)0.28593 (17)0.0450 (10)
H10A−0.25010.90050.27190.054*
C20.1946 (4)0.7137 (4)0.62829 (18)0.0424 (9)
N10.3665 (4)0.5364 (4)0.43658 (16)0.0520 (9)
C150.2951 (4)0.6490 (5)0.45053 (17)0.0454 (10)
H15A0.21690.63100.46780.054*
C160.4864 (5)0.5594 (6)0.4064 (3)0.0785 (16)
H16A0.50390.65740.40490.118*
H16B0.47870.52300.36610.118*
H16C0.55540.51310.42840.118*
C170.3215 (7)0.3854 (5)0.4433 (3)0.102 (2)
H17A0.24170.38400.46350.152*
H17B0.38520.33390.46660.152*
H17C0.30930.34400.40410.152*
H6B0.098 (4)1.144 (5)0.5204 (19)0.053 (14)*
U11U22U33U12U13U23
Ni10.0240 (2)0.0404 (3)0.0343 (3)−0.0019 (2)−0.00076 (18)0.0032 (2)
Cl30.0426 (6)0.0615 (7)0.0608 (7)−0.0183 (5)−0.0015 (5)−0.0011 (5)
Cl10.0498 (6)0.0627 (8)0.0729 (8)−0.0140 (6)−0.0032 (5)0.0246 (6)
Cl40.0634 (8)0.1139 (12)0.0473 (7)0.0148 (7)−0.0164 (6)0.0139 (7)
Cl20.0638 (8)0.1517 (15)0.0571 (8)0.0273 (9)−0.0192 (6)0.0263 (8)
O20.0269 (13)0.0485 (16)0.0427 (15)−0.0026 (12)−0.0017 (11)0.0023 (12)
O10.0250 (12)0.0498 (16)0.0338 (13)−0.0039 (11)−0.0017 (10)0.0079 (12)
O40.0331 (14)0.0597 (18)0.0389 (15)−0.0096 (13)0.0006 (12)0.0086 (13)
O60.0254 (13)0.0477 (17)0.0420 (16)0.0006 (11)0.0006 (11)0.0018 (13)
O30.0291 (13)0.0466 (16)0.0362 (14)−0.0065 (11)−0.0026 (11)0.0037 (12)
O50.0376 (15)0.0380 (16)0.0558 (17)0.0015 (12)0.0049 (12)−0.0017 (13)
C10.0301 (19)0.038 (2)0.0329 (19)0.0057 (16)0.0028 (15)−0.0011 (16)
C70.0231 (17)0.049 (2)0.046 (2)−0.0035 (17)−0.0017 (16)−0.0043 (19)
C80.0279 (18)0.038 (2)0.034 (2)0.0025 (16)0.0010 (15)−0.0049 (16)
C90.033 (2)0.041 (2)0.040 (2)−0.0006 (17)0.0021 (16)−0.0042 (17)
C50.031 (2)0.071 (3)0.043 (2)0.010 (2)−0.0048 (17)−0.008 (2)
C110.042 (2)0.071 (3)0.033 (2)0.010 (2)−0.0061 (17)−0.002 (2)
C40.042 (2)0.082 (3)0.036 (2)0.018 (2)−0.0031 (18)0.007 (2)
C130.033 (2)0.054 (3)0.035 (2)−0.0012 (18)0.0016 (16)−0.0016 (18)
C120.049 (2)0.059 (3)0.040 (2)−0.001 (2)0.0009 (19)0.008 (2)
C60.0258 (18)0.047 (2)0.036 (2)0.0043 (16)0.0015 (15)−0.0056 (17)
C30.045 (2)0.067 (3)0.047 (2)0.012 (2)0.004 (2)0.016 (2)
C140.043 (2)0.057 (3)0.038 (2)−0.011 (2)0.0053 (18)0.0128 (19)
C100.031 (2)0.060 (3)0.044 (2)0.0008 (19)−0.0034 (17)−0.015 (2)
C20.038 (2)0.044 (2)0.045 (2)0.0038 (18)0.0032 (17)0.0064 (19)
N10.056 (2)0.041 (2)0.059 (2)−0.0003 (17)−0.0052 (18)−0.0027 (17)
C150.040 (2)0.053 (3)0.043 (2)−0.010 (2)−0.0007 (18)−0.003 (2)
C160.066 (3)0.075 (4)0.096 (4)0.020 (3)0.015 (3)−0.009 (3)
C170.124 (6)0.037 (3)0.142 (6)−0.015 (3)−0.008 (5)0.001 (3)
Ni1—O32.041 (2)C5—C41.400 (6)
Ni1—O12.041 (2)C5—C61.411 (5)
Ni1—O22.061 (3)C5—H5A0.9300
Ni1—O42.070 (3)C11—C121.372 (6)
Ni1—O52.148 (3)C11—C101.426 (6)
Ni1—O62.150 (3)C4—C31.408 (6)
Cl3—C91.784 (4)C13—C121.416 (5)
Cl1—C21.764 (4)C13—C141.448 (5)
Cl4—C111.754 (4)C12—H12A0.9300
Cl2—C41.748 (4)C3—C21.365 (5)
O2—C71.239 (4)C3—H3A0.9300
O1—C11.295 (4)C14—H14A0.9300
O4—C141.226 (4)C10—H10A0.9300
O6—H6A0.8200N1—C151.356 (5)
O6—H6B0.83 (4)N1—C161.456 (6)
O3—C81.292 (4)N1—C171.534 (6)
O5—C151.301 (5)C15—H15A0.9300
C1—C61.437 (5)C16—H16A0.9600
C1—C21.463 (5)C16—H16B0.9600
C7—C61.483 (5)C16—H16C0.9600
C7—H7A0.9300C17—H17A0.9600
C8—C91.441 (5)C17—H17B0.9600
C8—C131.465 (5)C17—H17C0.9600
C9—C101.374 (5)
O3—Ni1—O192.08 (10)C5—C4—Cl2121.1 (4)
O3—Ni1—O2177.03 (10)C3—C4—Cl2118.0 (3)
O1—Ni1—O290.12 (10)C12—C13—C14114.5 (4)
O3—Ni1—O490.51 (10)C12—C13—C8122.9 (3)
O1—Ni1—O4176.71 (10)C14—C13—C8122.7 (3)
O2—Ni1—O487.36 (10)C11—C12—C13119.2 (4)
O3—Ni1—O592.13 (10)C11—C12—H12A120.4
O1—Ni1—O588.33 (10)C13—C12—H12A120.4
O2—Ni1—O589.92 (10)C5—C6—C1119.4 (4)
O4—Ni1—O589.55 (11)C5—C6—C7116.9 (3)
O3—Ni1—O692.88 (10)C1—C6—C7123.7 (3)
O1—Ni1—O695.38 (10)C2—C3—C4118.5 (4)
O2—Ni1—O684.93 (10)C2—C3—H3A120.8
O4—Ni1—O686.51 (11)C4—C3—H3A120.8
O5—Ni1—O6173.65 (10)O4—C14—C13127.9 (4)
C7—O2—Ni1123.9 (2)O4—C14—H14A116.0
C1—O1—Ni1126.3 (2)C13—C14—H14A116.0
C14—O4—Ni1125.1 (2)C9—C10—C11121.5 (4)
Ni1—O6—H6A109.5C9—C10—H10A119.3
Ni1—O6—H6B106 (3)C11—C10—H10A119.3
H6A—O6—H6B96.5C3—C2—C1123.6 (4)
C8—O3—Ni1124.5 (2)C3—C2—Cl1117.6 (3)
C15—O5—Ni1126.0 (2)C1—C2—Cl1118.9 (3)
O1—C1—C6123.1 (3)C15—N1—C16118.1 (4)
O1—C1—C2120.6 (3)C15—N1—C17124.0 (4)
C6—C1—C2116.3 (3)C16—N1—C17117.4 (4)
O2—C7—C6128.0 (3)O5—C15—N1127.4 (4)
O2—C7—H7A116.0O5—C15—H15A116.3
C6—C7—H7A116.0N1—C15—H15A116.3
O3—C8—C9119.8 (3)N1—C16—H16A109.5
O3—C8—C13125.9 (3)N1—C16—H16B109.5
C9—C8—C13114.4 (3)H16A—C16—H16B109.5
C10—C9—C8121.9 (4)N1—C16—H16C109.5
C10—C9—Cl3119.8 (3)H16A—C16—H16C109.5
C8—C9—Cl3118.3 (3)H16B—C16—H16C109.5
C4—C5—C6121.4 (4)N1—C17—H17A109.5
C4—C5—H5A119.3N1—C17—H17B109.5
C6—C5—H5A119.3H17A—C17—H17B109.5
C12—C11—C10120.1 (4)N1—C17—H17C109.5
C12—C11—Cl4119.0 (3)H17A—C17—H17C109.5
C10—C11—Cl4120.9 (3)H17B—C17—H17C109.5
C5—C4—C3120.9 (4)
D—H···AD—HH···AD···AD—H···A
O6—H6A···O1i0.821.912.714 (3)168
O6—H6B···O3i0.83 (4)2.17 (4)2.850 (4)139 (4)
O6—H6B···Cl3i0.84 (4)2.67 (4)3.374 (3)143 (4)
Table 1

Selected bond lengths (Å)

Ni1—O32.041 (2)
Ni1—O12.041 (2)
Ni1—O22.061 (3)
Ni1—O42.070 (3)
Ni1—O52.148 (3)
Ni1—O62.150 (3)
Table 2

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
O6—H6A⋯O1i0.821.912.714 (3)168
O6—H6B⋯O3i0.83 (4)2.17 (4)2.850 (4)139 (4)
O6—H6B⋯Cl3i0.84 (4)2.67 (4)3.374 (3)143 (4)

Symmetry code: (i) .

  2 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  Supramolecular chemistry of halogens: complementary features of inorganic (M-X) and organic (C-X') halogens applied to M-X...X'-C halogen bond formation.

Authors:  Fiorenzo Zordan; Lee Brammer; Paul Sherwood
Journal:  J Am Chem Soc       Date:  2005-04-27       Impact factor: 15.419

  2 in total
  1 in total

1.  Diaqua-bis(4-bromo-2-formyl-phenolato-κO,O')cobalt(II).

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Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-09-06
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