| Literature DB >> 21203023 |
Wei Dai1.
Abstract
In the title compound, {[Mn(C(6)H(2)D(2)NO(2))(2)(H(2)O)]·C(2)H(6)O}(n), the Mn(II) metal centre displays a slightly distorted octa-hedral coordination geometry, provided by three O and two N atoms of five isonicotinate ligands and one O atom of a water mol-ecule. There are two types of isonicotinate anions, one acting as a bridging tridentate group and the other in a bridging bidentate fashion, to form a polymeric three-dimensional network. The structure is stabilized by intra- and inter-molecular O-H⋯O and C-H⋯O hydrogen-bond inter-actions.Entities:
Year: 2008 PMID: 21203023 PMCID: PMC2961953 DOI: 10.1107/S1600536808016206
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [Mn(C6H2D2NO2)2(H2O)]·C2H6O | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yn | Cell parameters from 19580 reflections |
| θ = 3.0–27.5º | |
| µ = 0.84 mm−1 | |
| β = 110.02 (3)º | Block, yellow |
| 0.20 × 0.20 × 0.20 mm | |
| Rigaku Mercury2 (2x2 bin mode) diffractometer | 3701 independent reflections |
| Radiation source: fine-focus sealed tube | 3087 reflections with |
| Monochromator: graphite | |
| Detector resolution: 13.6612 pixels mm-1 | θmax = 27.5º |
| θmin = 3.0º | |
| CCD profile fitting scans | |
| Absorption correction: multi-scan(CrystalClear; Rigaku, 2005) | |
| 16339 measured reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 3701 reflections | Δρmax = 0.52 e Å−3 |
| 248 parameters | Δρmin = −0.52 e Å−3 |
| Primary atom site location: structure-invariant direct methods | Extinction correction: none |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Mn1 | 0.93671 (3) | 0.50175 (2) | 0.16410 (2) | 0.02182 (15) | |
| O5 | 0.87201 (17) | 0.38008 (13) | 0.03681 (14) | 0.0391 (4) | |
| O4 | 0.79806 (18) | 0.41661 (16) | 0.22877 (17) | 0.0411 (4) | |
| N1 | 0.77113 (19) | 0.61593 (15) | 0.06381 (16) | 0.0334 (4) | |
| C7 | 0.7734 (2) | 0.27522 (17) | −0.12181 (17) | 0.0260 (4) | |
| C12 | 0.8682 (2) | 0.36318 (16) | −0.05830 (18) | 0.0268 (4) | |
| C11 | 0.6930 (3) | 0.2208 (2) | −0.0751 (2) | 0.0395 (6) | |
| C5 | 0.7818 (2) | 0.72543 (19) | 0.0584 (2) | 0.0376 (5) | |
| C8 | 0.7617 (2) | 0.2480 (2) | −0.2283 (2) | 0.0353 (5) | |
| C1 | 0.6582 (2) | 0.5717 (2) | 0.0011 (2) | 0.0404 (6) | |
| C2 | 0.5536 (2) | 0.63237 (19) | −0.0664 (2) | 0.0395 (6) | |
| C3 | 0.5668 (2) | 0.74530 (17) | −0.07336 (16) | 0.0273 (4) | |
| C4 | 0.6847 (2) | 0.79184 (19) | −0.00909 (19) | 0.0358 (5) | |
| C6 | 0.4577 (2) | 0.81308 (17) | −0.15183 (17) | 0.0274 (4) | |
| O3 | 0.34326 (15) | 0.77890 (14) | −0.17448 (14) | 0.0386 (4) | |
| O2 | 0.49329 (16) | 0.89829 (13) | −0.18801 (14) | 0.0385 (4) | |
| O1 | 0.9325 (2) | 0.40991 (17) | −0.10687 (17) | 0.0554 (5) | |
| C10 | 0.6056 (3) | 0.1433 (2) | −0.1362 (2) | 0.0409 (6) | |
| C9 | 0.6720 (2) | 0.1688 (2) | −0.2837 (2) | 0.0355 (5) | |
| N2 | 0.59483 (18) | 0.11618 (15) | −0.23923 (15) | 0.0311 (4) | |
| O6 | 0.6716 (3) | 0.5555 (2) | 0.3174 (4) | 0.1366 (18) | |
| H6A | 0.7151 (3) | 0.6101 (2) | 0.3078 (4) | 0.205* | |
| C14 | 0.5578 (4) | 0.5893 (4) | 0.3214 (6) | 0.118 (2) | |
| H14A | 0.5176 (4) | 0.6222 (4) | 0.2618 (6) | 0.142* | |
| H14B | 0.5716 (4) | 0.6358 (4) | 0.3729 (6) | 0.142* | |
| C13 | 0.4751 (7) | 0.5076 (5) | 0.3359 (7) | 0.132 (3) | |
| H13A | 0.3950 (7) | 0.5394 (5) | 0.3370 (7) | 0.197* | |
| H13B | 0.4566 (7) | 0.4556 (5) | 0.2771 (7) | 0.197* | |
| H13C | 0.5183 (7) | 0.4711 (5) | 0.4041 (7) | 0.197* | |
| H8A | 0.804 (3) | 0.287 (2) | −0.269 (2) | 0.038 (7)* | |
| D3 | 0.662 (2) | 0.1472 (19) | −0.355 (2) | 0.028 (6)* | |
| D1 | 0.648 (4) | 0.495 (3) | 0.008 (3) | 0.063 (12)* | |
| D4 | 0.549 (3) | 0.109 (2) | −0.105 (3) | 0.044 (7)* | |
| H4A | 0.701 (3) | 0.872 (2) | −0.015 (2) | 0.044 (7)* | |
| D2 | 0.864 (3) | 0.758 (2) | 0.109 (2) | 0.044 (7)* | |
| H11A | 0.708 (3) | 0.236 (3) | 0.002 (3) | 0.065 (10)* | |
| H2A | 0.472 (3) | 0.591 (3) | −0.105 (3) | 0.066 (10)* | |
| H1W | 0.758 (4) | 0.351 (3) | 0.202 (3) | 0.069 (10)* | |
| H2W | 0.751 (4) | 0.450 (3) | 0.252 (3) | 0.066 (11)* |
| Mn1 | 0.0206 (2) | 0.0197 (2) | 0.0215 (2) | −0.00130 (10) | 0.00247 (15) | −0.00019 (10) |
| O5 | 0.0464 (10) | 0.0376 (9) | 0.0314 (9) | −0.0144 (7) | 0.0108 (7) | −0.0118 (7) |
| O4 | 0.0420 (10) | 0.0345 (9) | 0.0554 (11) | −0.0090 (8) | 0.0275 (9) | −0.0037 (8) |
| N1 | 0.0309 (10) | 0.0305 (9) | 0.0331 (10) | 0.0022 (8) | 0.0037 (8) | 0.0083 (7) |
| C7 | 0.0240 (10) | 0.0263 (10) | 0.0262 (10) | −0.0052 (8) | 0.0067 (8) | −0.0016 (8) |
| C12 | 0.0233 (10) | 0.0227 (10) | 0.0313 (11) | −0.0033 (8) | 0.0054 (8) | −0.0014 (8) |
| C11 | 0.0475 (14) | 0.0470 (13) | 0.0266 (12) | −0.0224 (11) | 0.0159 (10) | −0.0072 (10) |
| C5 | 0.0368 (13) | 0.0316 (11) | 0.0339 (12) | −0.0019 (10) | −0.0014 (10) | 0.0003 (9) |
| C8 | 0.0331 (12) | 0.0427 (14) | 0.0344 (12) | −0.0145 (10) | 0.0173 (10) | −0.0070 (10) |
| C1 | 0.0309 (12) | 0.0290 (12) | 0.0532 (15) | −0.0014 (9) | 0.0042 (10) | 0.0125 (10) |
| C2 | 0.0299 (12) | 0.0307 (12) | 0.0488 (15) | −0.0029 (9) | 0.0018 (10) | 0.0105 (10) |
| C3 | 0.0280 (10) | 0.0297 (11) | 0.0237 (10) | 0.0024 (8) | 0.0083 (8) | 0.0076 (8) |
| C4 | 0.0389 (13) | 0.0268 (11) | 0.0337 (12) | −0.0038 (10) | 0.0022 (10) | 0.0015 (9) |
| C6 | 0.0308 (11) | 0.0272 (10) | 0.0228 (10) | 0.0021 (8) | 0.0074 (8) | 0.0046 (8) |
| O3 | 0.0279 (8) | 0.0365 (9) | 0.0472 (10) | 0.0006 (7) | 0.0074 (7) | 0.0112 (7) |
| O2 | 0.0381 (9) | 0.0329 (8) | 0.0362 (9) | −0.0031 (7) | 0.0021 (7) | 0.0171 (7) |
| O1 | 0.0586 (12) | 0.0619 (12) | 0.0511 (12) | −0.0404 (10) | 0.0255 (10) | −0.0110 (9) |
| C10 | 0.0474 (14) | 0.0483 (14) | 0.0303 (12) | −0.0261 (12) | 0.0175 (11) | −0.0060 (10) |
| C9 | 0.0390 (13) | 0.0431 (13) | 0.0277 (12) | −0.0136 (10) | 0.0157 (10) | −0.0124 (9) |
| N2 | 0.0320 (10) | 0.0329 (10) | 0.0261 (9) | −0.0122 (8) | 0.0071 (7) | −0.0055 (7) |
| O6 | 0.103 (2) | 0.0659 (18) | 0.295 (5) | −0.0334 (17) | 0.138 (3) | −0.077 (3) |
| C14 | 0.064 (3) | 0.085 (3) | 0.216 (7) | −0.019 (2) | 0.062 (3) | −0.044 (3) |
| C13 | 0.098 (5) | 0.143 (6) | 0.184 (8) | −0.016 (3) | 0.087 (5) | 0.011 (4) |
| Mn1—O1i | 2.1151 (18) | C2—H2A | 1.00 (3) |
| Mn1—O5 | 2.1537 (16) | C2—C3 | 1.389 (3) |
| Mn1—O2ii | 2.1806 (16) | C3—C4 | 1.392 (3) |
| Mn1—O4 | 2.2228 (18) | C3—C6 | 1.519 (3) |
| Mn1—N2iii | 2.2656 (18) | C4—H4A | 1.00 (3) |
| Mn1—N1 | 2.2987 (19) | C6—O3 | 1.251 (3) |
| O5—C12 | 1.242 (3) | C6—O2 | 1.255 (3) |
| O4—H2W | 0.79 (4) | O2—Mn1iv | 2.1806 (16) |
| O4—H1W | 0.92 (4) | O1—Mn1i | 2.1151 (18) |
| N1—C1 | 1.336 (3) | C10—N2 | 1.346 (3) |
| N1—C5 | 1.343 (3) | C10—D4 | 0.95 (3) |
| C7—C8 | 1.388 (3) | C9—N2 | 1.336 (3) |
| C7—C11 | 1.393 (3) | C9—D3 | 0.93 (3) |
| C7—C12 | 1.521 (3) | N2—Mn1v | 2.2656 (18) |
| C12—O1 | 1.232 (3) | O6—H6A | 0.8499 |
| C11—H11A | 0.98 (4) | O6—C14 | 1.325 (5) |
| C11—C10 | 1.384 (3) | C14—H14A | 0.8499 |
| C5—C4 | 1.382 (3) | C14—H14B | 0.8500 |
| C5—D2 | 0.99 (3) | C14—C13 | 1.397 (7) |
| C8—H8A | 0.95 (3) | C13—H13A | 0.9599 |
| C8—C9 | 1.387 (3) | C13—H13C | 0.9600 |
| C1—C2 | 1.390 (3) | C13—H13B | 0.9602 |
| C1—D1 | 0.94 (3) | ||
| O1i—Mn1—O5 | 99.32 (7) | N1—C1—D1 | 117 (2) |
| O1i—Mn1—O2ii | 90.33 (8) | C2—C1—D1 | 119 (2) |
| O5—Mn1—O2ii | 169.24 (7) | H2A—C2—C3 | 124.0 (19) |
| O1i—Mn1—O4 | 177.07 (8) | H2A—C2—C1 | 117 (2) |
| O5—Mn1—O4 | 83.34 (7) | C3—C2—C1 | 119.1 (2) |
| O2ii—Mn1—O4 | 87.12 (8) | C2—C3—C4 | 117.3 (2) |
| O1i—Mn1—N2iii | 92.38 (8) | C2—C3—C6 | 120.46 (19) |
| O5—Mn1—N2iii | 88.71 (7) | C4—C3—C6 | 122.16 (19) |
| O2ii—Mn1—N2iii | 86.11 (7) | H4A—C4—C5 | 120.1 (17) |
| O4—Mn1—N2iii | 88.90 (7) | H4A—C4—C3 | 120.4 (17) |
| O1i—Mn1—N1 | 89.17 (8) | C5—C4—C3 | 119.5 (2) |
| O5—Mn1—N1 | 89.58 (7) | O3—C6—O2 | 126.75 (19) |
| O2ii—Mn1—N1 | 95.35 (7) | O3—C6—C3 | 117.77 (18) |
| O4—Mn1—N1 | 89.63 (7) | O2—C6—C3 | 115.47 (18) |
| N2iii—Mn1—N1 | 177.87 (6) | C6—O2—Mn1iv | 139.70 (15) |
| C12—O5—Mn1 | 140.47 (14) | C12—O1—Mn1i | 170.48 (18) |
| H2W—O4—H1W | 107 (3) | N2—C10—C11 | 123.2 (2) |
| H2W—O4—Mn1 | 122 (3) | N2—C10—D4 | 118.4 (18) |
| H1W—O4—Mn1 | 124 (2) | C11—C10—D4 | 118.4 (18) |
| C1—N1—C5 | 116.52 (19) | N2—C9—C8 | 123.0 (2) |
| C1—N1—Mn1 | 118.92 (15) | N2—C9—D3 | 114.5 (15) |
| C5—N1—Mn1 | 124.44 (15) | C8—C9—D3 | 122.4 (15) |
| C8—C7—C11 | 117.73 (19) | C9—N2—C10 | 117.39 (19) |
| C8—C7—C12 | 121.61 (18) | C9—N2—Mn1v | 122.39 (15) |
| C11—C7—C12 | 120.64 (19) | C10—N2—Mn1v | 119.92 (14) |
| O1—C12—O5 | 127.2 (2) | H6A—O6—C14 | 110 |
| O1—C12—C7 | 116.5 (2) | H14A—C14—H14B | 107.5 |
| O5—C12—C7 | 116.30 (18) | H14A—C14—O6 | 108 |
| H11A—C11—C10 | 124 (2) | H14B—C14—O6 | 109 |
| H11A—C11—C7 | 117 (2) | H14A—C14—C13 | 108 |
| C10—C11—C7 | 119.1 (2) | H14B—C14—C13 | 108 |
| N1—C5—C4 | 123.6 (2) | O6—C14—C13 | 116.1 (5) |
| N1—C5—D2 | 115.9 (16) | H13A—C13—H13C | 109.5 |
| C4—C5—D2 | 120.4 (16) | H13A—C13—H13B | 109.5 |
| H8A—C8—C9 | 116.9 (16) | H13C—C13—H13B | 109.5 |
| H8A—C8—C7 | 123.2 (16) | H13A—C13—C14 | 110 |
| C9—C8—C7 | 119.5 (2) | H13C—C13—C14 | 109 |
| N1—C1—C2 | 123.9 (2) | H13B—C13—C14 | 109 |
| H··· | ||||
| C11—H11A···O5 | 0.98 (4) | 2.44 (3) | 2.784 (3) | 100 (2) |
| O4—H2W···O6 | 0.79 (4) | 1.90 (4) | 2.680 (5) | 166 (4) |
| O6—H6A···O3ii | 0.85 | 1.90 | 2.729 (3) | 165 |
| C11—H11A···O3vi | 0.98 (4) | 2.50 (4) | 3.404 (4) | 153 (3) |
| O4—H1W···O3vi | 0.92 (4) | 1.89 (4) | 2.793 (3) | 166 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C11—H11 | 0.98 (4) | 2.44 (3) | 2.784 (3) | 100 (2) |
| O4—H2 | 0.79 (4) | 1.90 (4) | 2.680 (5) | 166 (4) |
| O6—H6 | 0.85 | 1.90 | 2.729 (3) | 165 |
| C11—H11 | 0.98 (4) | 2.50 (4) | 3.404 (4) | 153 (3) |
| O4—H1 | 0.92 (4) | 1.89 (4) | 2.793 (3) | 166 (3) |
Symmetry codes: (i) ; (ii) .