Literature DB >> 21203023

Poly[[aqua-[μ(3)-(2,6-H(2))-isonicotinato-κN:O:O'][μ(2)-(2,6-H(2))-isonicotinato-κN:O]manganese(II)] ethanol solvate].

Wei Dai1.   

Abstract

In the title compound, {[Mn(C(6)H(2)D(2)NO(2))(2)(H(2)O)]·C(2)H(6)O}(n), the Mn(II) metal centre displays a slightly distorted octa-hedral coordination geometry, provided by three O and two N atoms of five isonicotinate ligands and one O atom of a water mol-ecule. There are two types of isonicotinate anions, one acting as a bridging tridentate group and the other in a bridging bidentate fashion, to form a polymeric three-dimensional network. The structure is stabilized by intra- and inter-molecular O-H⋯O and C-H⋯O hydrogen-bond inter-actions.

Entities:  

Year:  2008        PMID: 21203023      PMCID: PMC2961953          DOI: 10.1107/S1600536808016206

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Akutagawa et al. (2004 ▶); Cova et al. (2001 ▶); Pavlik & Laohhasurayotin (2005 ▶); Sekiya & Nishikiori (2001 ▶).

Experimental

Crystal data

[Mn(C6H2D2NO2)2(H2O)]·C2H6O M = 367.24 Monoclinic, a = 10.903 (2) Å b = 12.180 (2) Å c = 13.015 (3) Å β = 110.02 (3)° V = 1623.9 (6) Å3 Z = 4 Mo Kα radiation μ = 0.84 mm−1 T = 293 (2) K 0.20 × 0.20 × 0.20 mm

Data collection

Rigaku Mercury2 diffractometer Absorption correction: multi-scan (CrystalClear; Rigaku, 2005 ▶) T min = 0.795, T max = 0.841 16339 measured reflections 3701 independent reflections 3087 reflections with I > 2σ(I) R int = 0.042

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.142 S = 1.06 3701 reflections 248 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.52 e Å−3 Δρmin = −0.52 e Å−3 Data collection: CrystalClear (Rigaku, 2005 ▶); cell refinement: CrystalClear; data reduction: CrystalClear; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536808016206/rz2216sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808016206/rz2216Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Mn(C6H2D2NO2)2(H2O)]·C2H6OF000 = 748
Mr = 367.24Dx = 1.502 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 19580 reflections
a = 10.903 (2) Åθ = 3.0–27.5º
b = 12.180 (2) ŵ = 0.84 mm1
c = 13.015 (3) ÅT = 293 (2) K
β = 110.02 (3)ºBlock, yellow
V = 1623.9 (6) Å30.20 × 0.20 × 0.20 mm
Z = 4
Rigaku Mercury2 (2x2 bin mode) diffractometer3701 independent reflections
Radiation source: fine-focus sealed tube3087 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.042
Detector resolution: 13.6612 pixels mm-1θmax = 27.5º
T = 293(2) Kθmin = 3.0º
CCD profile fitting scansh = −14→14
Absorption correction: multi-scan(CrystalClear; Rigaku, 2005)k = −15→15
Tmin = 0.795, Tmax = 0.841l = −16→16
16339 measured reflections
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.040H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.142  w = 1/[σ2(Fo2) + (0.1P)2] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max < 0.001
3701 reflectionsΔρmax = 0.52 e Å3
248 parametersΔρmin = −0.52 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Mn10.93671 (3)0.50175 (2)0.16410 (2)0.02182 (15)
O50.87201 (17)0.38008 (13)0.03681 (14)0.0391 (4)
O40.79806 (18)0.41661 (16)0.22877 (17)0.0411 (4)
N10.77113 (19)0.61593 (15)0.06381 (16)0.0334 (4)
C70.7734 (2)0.27522 (17)−0.12181 (17)0.0260 (4)
C120.8682 (2)0.36318 (16)−0.05830 (18)0.0268 (4)
C110.6930 (3)0.2208 (2)−0.0751 (2)0.0395 (6)
C50.7818 (2)0.72543 (19)0.0584 (2)0.0376 (5)
C80.7617 (2)0.2480 (2)−0.2283 (2)0.0353 (5)
C10.6582 (2)0.5717 (2)0.0011 (2)0.0404 (6)
C20.5536 (2)0.63237 (19)−0.0664 (2)0.0395 (6)
C30.5668 (2)0.74530 (17)−0.07336 (16)0.0273 (4)
C40.6847 (2)0.79184 (19)−0.00909 (19)0.0358 (5)
C60.4577 (2)0.81308 (17)−0.15183 (17)0.0274 (4)
O30.34326 (15)0.77890 (14)−0.17448 (14)0.0386 (4)
O20.49329 (16)0.89829 (13)−0.18801 (14)0.0385 (4)
O10.9325 (2)0.40991 (17)−0.10687 (17)0.0554 (5)
C100.6056 (3)0.1433 (2)−0.1362 (2)0.0409 (6)
C90.6720 (2)0.1688 (2)−0.2837 (2)0.0355 (5)
N20.59483 (18)0.11618 (15)−0.23923 (15)0.0311 (4)
O60.6716 (3)0.5555 (2)0.3174 (4)0.1366 (18)
H6A0.7151 (3)0.6101 (2)0.3078 (4)0.205*
C140.5578 (4)0.5893 (4)0.3214 (6)0.118 (2)
H14A0.5176 (4)0.6222 (4)0.2618 (6)0.142*
H14B0.5716 (4)0.6358 (4)0.3729 (6)0.142*
C130.4751 (7)0.5076 (5)0.3359 (7)0.132 (3)
H13A0.3950 (7)0.5394 (5)0.3370 (7)0.197*
H13B0.4566 (7)0.4556 (5)0.2771 (7)0.197*
H13C0.5183 (7)0.4711 (5)0.4041 (7)0.197*
H8A0.804 (3)0.287 (2)−0.269 (2)0.038 (7)*
D30.662 (2)0.1472 (19)−0.355 (2)0.028 (6)*
D10.648 (4)0.495 (3)0.008 (3)0.063 (12)*
D40.549 (3)0.109 (2)−0.105 (3)0.044 (7)*
H4A0.701 (3)0.872 (2)−0.015 (2)0.044 (7)*
D20.864 (3)0.758 (2)0.109 (2)0.044 (7)*
H11A0.708 (3)0.236 (3)0.002 (3)0.065 (10)*
H2A0.472 (3)0.591 (3)−0.105 (3)0.066 (10)*
H1W0.758 (4)0.351 (3)0.202 (3)0.069 (10)*
H2W0.751 (4)0.450 (3)0.252 (3)0.066 (11)*
U11U22U33U12U13U23
Mn10.0206 (2)0.0197 (2)0.0215 (2)−0.00130 (10)0.00247 (15)−0.00019 (10)
O50.0464 (10)0.0376 (9)0.0314 (9)−0.0144 (7)0.0108 (7)−0.0118 (7)
O40.0420 (10)0.0345 (9)0.0554 (11)−0.0090 (8)0.0275 (9)−0.0037 (8)
N10.0309 (10)0.0305 (9)0.0331 (10)0.0022 (8)0.0037 (8)0.0083 (7)
C70.0240 (10)0.0263 (10)0.0262 (10)−0.0052 (8)0.0067 (8)−0.0016 (8)
C120.0233 (10)0.0227 (10)0.0313 (11)−0.0033 (8)0.0054 (8)−0.0014 (8)
C110.0475 (14)0.0470 (13)0.0266 (12)−0.0224 (11)0.0159 (10)−0.0072 (10)
C50.0368 (13)0.0316 (11)0.0339 (12)−0.0019 (10)−0.0014 (10)0.0003 (9)
C80.0331 (12)0.0427 (14)0.0344 (12)−0.0145 (10)0.0173 (10)−0.0070 (10)
C10.0309 (12)0.0290 (12)0.0532 (15)−0.0014 (9)0.0042 (10)0.0125 (10)
C20.0299 (12)0.0307 (12)0.0488 (15)−0.0029 (9)0.0018 (10)0.0105 (10)
C30.0280 (10)0.0297 (11)0.0237 (10)0.0024 (8)0.0083 (8)0.0076 (8)
C40.0389 (13)0.0268 (11)0.0337 (12)−0.0038 (10)0.0022 (10)0.0015 (9)
C60.0308 (11)0.0272 (10)0.0228 (10)0.0021 (8)0.0074 (8)0.0046 (8)
O30.0279 (8)0.0365 (9)0.0472 (10)0.0006 (7)0.0074 (7)0.0112 (7)
O20.0381 (9)0.0329 (8)0.0362 (9)−0.0031 (7)0.0021 (7)0.0171 (7)
O10.0586 (12)0.0619 (12)0.0511 (12)−0.0404 (10)0.0255 (10)−0.0110 (9)
C100.0474 (14)0.0483 (14)0.0303 (12)−0.0261 (12)0.0175 (11)−0.0060 (10)
C90.0390 (13)0.0431 (13)0.0277 (12)−0.0136 (10)0.0157 (10)−0.0124 (9)
N20.0320 (10)0.0329 (10)0.0261 (9)−0.0122 (8)0.0071 (7)−0.0055 (7)
O60.103 (2)0.0659 (18)0.295 (5)−0.0334 (17)0.138 (3)−0.077 (3)
C140.064 (3)0.085 (3)0.216 (7)−0.019 (2)0.062 (3)−0.044 (3)
C130.098 (5)0.143 (6)0.184 (8)−0.016 (3)0.087 (5)0.011 (4)
Mn1—O1i2.1151 (18)C2—H2A1.00 (3)
Mn1—O52.1537 (16)C2—C31.389 (3)
Mn1—O2ii2.1806 (16)C3—C41.392 (3)
Mn1—O42.2228 (18)C3—C61.519 (3)
Mn1—N2iii2.2656 (18)C4—H4A1.00 (3)
Mn1—N12.2987 (19)C6—O31.251 (3)
O5—C121.242 (3)C6—O21.255 (3)
O4—H2W0.79 (4)O2—Mn1iv2.1806 (16)
O4—H1W0.92 (4)O1—Mn1i2.1151 (18)
N1—C11.336 (3)C10—N21.346 (3)
N1—C51.343 (3)C10—D40.95 (3)
C7—C81.388 (3)C9—N21.336 (3)
C7—C111.393 (3)C9—D30.93 (3)
C7—C121.521 (3)N2—Mn1v2.2656 (18)
C12—O11.232 (3)O6—H6A0.8499
C11—H11A0.98 (4)O6—C141.325 (5)
C11—C101.384 (3)C14—H14A0.8499
C5—C41.382 (3)C14—H14B0.8500
C5—D20.99 (3)C14—C131.397 (7)
C8—H8A0.95 (3)C13—H13A0.9599
C8—C91.387 (3)C13—H13C0.9600
C1—C21.390 (3)C13—H13B0.9602
C1—D10.94 (3)
O1i—Mn1—O599.32 (7)N1—C1—D1117 (2)
O1i—Mn1—O2ii90.33 (8)C2—C1—D1119 (2)
O5—Mn1—O2ii169.24 (7)H2A—C2—C3124.0 (19)
O1i—Mn1—O4177.07 (8)H2A—C2—C1117 (2)
O5—Mn1—O483.34 (7)C3—C2—C1119.1 (2)
O2ii—Mn1—O487.12 (8)C2—C3—C4117.3 (2)
O1i—Mn1—N2iii92.38 (8)C2—C3—C6120.46 (19)
O5—Mn1—N2iii88.71 (7)C4—C3—C6122.16 (19)
O2ii—Mn1—N2iii86.11 (7)H4A—C4—C5120.1 (17)
O4—Mn1—N2iii88.90 (7)H4A—C4—C3120.4 (17)
O1i—Mn1—N189.17 (8)C5—C4—C3119.5 (2)
O5—Mn1—N189.58 (7)O3—C6—O2126.75 (19)
O2ii—Mn1—N195.35 (7)O3—C6—C3117.77 (18)
O4—Mn1—N189.63 (7)O2—C6—C3115.47 (18)
N2iii—Mn1—N1177.87 (6)C6—O2—Mn1iv139.70 (15)
C12—O5—Mn1140.47 (14)C12—O1—Mn1i170.48 (18)
H2W—O4—H1W107 (3)N2—C10—C11123.2 (2)
H2W—O4—Mn1122 (3)N2—C10—D4118.4 (18)
H1W—O4—Mn1124 (2)C11—C10—D4118.4 (18)
C1—N1—C5116.52 (19)N2—C9—C8123.0 (2)
C1—N1—Mn1118.92 (15)N2—C9—D3114.5 (15)
C5—N1—Mn1124.44 (15)C8—C9—D3122.4 (15)
C8—C7—C11117.73 (19)C9—N2—C10117.39 (19)
C8—C7—C12121.61 (18)C9—N2—Mn1v122.39 (15)
C11—C7—C12120.64 (19)C10—N2—Mn1v119.92 (14)
O1—C12—O5127.2 (2)H6A—O6—C14110
O1—C12—C7116.5 (2)H14A—C14—H14B107.5
O5—C12—C7116.30 (18)H14A—C14—O6108
H11A—C11—C10124 (2)H14B—C14—O6109
H11A—C11—C7117 (2)H14A—C14—C13108
C10—C11—C7119.1 (2)H14B—C14—C13108
N1—C5—C4123.6 (2)O6—C14—C13116.1 (5)
N1—C5—D2115.9 (16)H13A—C13—H13C109.5
C4—C5—D2120.4 (16)H13A—C13—H13B109.5
H8A—C8—C9116.9 (16)H13C—C13—H13B109.5
H8A—C8—C7123.2 (16)H13A—C13—C14110
C9—C8—C7119.5 (2)H13C—C13—C14109
N1—C1—C2123.9 (2)H13B—C13—C14109
D—H···AD—HH···AD···AD—H···A
C11—H11A···O50.98 (4)2.44 (3)2.784 (3)100 (2)
O4—H2W···O60.79 (4)1.90 (4)2.680 (5)166 (4)
O6—H6A···O3ii0.851.902.729 (3)165
C11—H11A···O3vi0.98 (4)2.50 (4)3.404 (4)153 (3)
O4—H1W···O3vi0.92 (4)1.89 (4)2.793 (3)166 (3)
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C11—H11A⋯O50.98 (4)2.44 (3)2.784 (3)100 (2)
O4—H2W⋯O60.79 (4)1.90 (4)2.680 (5)166 (4)
O6—H6A⋯O3i0.851.902.729 (3)165
C11—H11A⋯O3ii0.98 (4)2.50 (4)3.404 (4)153 (3)
O4—H1W⋯O3ii0.92 (4)1.89 (4)2.793 (3)166 (3)

Symmetry codes: (i) ; (ii) .

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