Literature DB >> 21203022

catena-Poly[[(2,2'-bipyrimidine-κN,N)diperchloratocopper(II)]-μ-4,4'-bipyridine-κN:N'].

Wei Xu1, Jian-Li Lin, Hong-Zhen Xie.   

Abstract

The central CuN(4)O(2) motif of the title compound, [Cu(ClO(4))(2)(C(8)H(6)N(4))(C(10)H(8)N(2))](n), exhibits a Jahn-Teller-distorted octa-hedral geometry around the metal centre, showing a considerably long Cu-O bond distance of 2.634 (4) Å towards the second perchlorate group occupying the sixth coordination site, giving a (4+1+1)-type coordination mode. The 4,4'-bipyridine (bipy) ligands are highly twisted with respect to each other, the dihedral angle between the two pyridyl ring planes being 38.9 (2)°. The bipy ligands act as bridging ligands between [Cu(ClO(4))(2)(2,2'-bpym)] (2,2'-bpym is 2,2'-bipyrimidine) units, generating an infinite one-dimensional zigzag chain along [010]. Intra- and intermolecular C-H⋯O hydrogen bonds are present in the crystal structure.

Entities:  

Year:  2008        PMID: 21203022      PMCID: PMC2961952          DOI: 10.1107/S1600536808021296

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Biradha & Fujita (2000 ▶); Eddaoudi et al. (2001 ▶); Hathaway (1973 ▶); Kaye & Long (2008 ▶); Kitagawa et al. (2006 ▶); Subramanian & Zaworotko (1995 ▶).

Experimental

Crystal data

[Cu(ClO4)2(C8H6N4)(C10H8N2)] M = 576.75 Monoclinic, a = 11.334 (2) Å b = 14.266 (3) Å c = 13.299 (3) Å β = 96.55 (3)° V = 2136.3 (8) Å3 Z = 4 Mo Kα radiation μ = 1.33 mm−1 T = 295 (2) K 0.32 × 0.26 × 0.15 mm

Data collection

Bruker P4 diffractometer Absorption correction: ψ scan (XSCANS; Siemens, 1996 ▶) T min = 0.664, T max = 0.815 4265 measured reflections 3686 independent reflections 2896 reflections with I > 2σ(I) R int = 0.045 3 standard reflections every 97 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.055 wR(F 2) = 0.160 S = 1.06 3686 reflections 317 parameters H-atom parameters constrained Δρmax = 0.93 e Å−3 Δρmin = −0.61 e Å−3 Data collection: XSCANS (Siemens, 1996 ▶); cell refinement: XSCANS; data reduction: XSCANS; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXL97; software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808021296/im2074sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808021296/im2074Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[Cu(ClO4)2(C8H6N4)(C10H8N2)]F000 = 1164
Mr = 576.75Dx = 1.793 Mg m3
Monoclinic, P21/nMo Kα radiation λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 25 reflections
a = 11.334 (2) Åθ = 5.0–12.5º
b = 14.266 (3) ŵ = 1.34 mm1
c = 13.299 (3) ÅT = 295 (2) K
β = 96.55 (3)ºBlock, purple
V = 2136.3 (8) Å30.32 × 0.26 × 0.15 mm
Z = 4
Bruker P4 diffractometerRint = 0.045
Radiation source: fine-focus sealed tubeθmax = 25.0º
Monochromator: graphiteθmin = 2.1º
T = 295(2) Kh = −13→1
θ/2θ scansk = −1→16
Absorption correction: multi-scan(XSCANS; Siemens, 1996)l = −15→15
Tmin = 0.664, Tmax = 0.8153 standard reflections
4265 measured reflections every 97 reflections
3686 independent reflections intensity decay: none
2896 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.055H-atom parameters constrained
wR(F2) = 0.160  w = 1/[σ2(Fo2) + (0.0889P)2 + 4.3786P] where P = (Fo2 + 2Fc2)/3
S = 1.06(Δ/σ)max = 0.001
3686 reflectionsΔρmax = 0.93 e Å3
317 parametersΔρmin = −0.61 e Å3
Primary atom site location: structure-invariant direct methodsExtinction correction: none
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
Cu0.59615 (4)0.21166 (4)0.34471 (4)0.0296 (2)
Cl10.73943 (10)0.14413 (9)0.10813 (9)0.0398 (3)
Cl20.62782 (13)0.18070 (11)0.60732 (10)0.0534 (4)
N10.6774 (3)0.0876 (3)0.3709 (3)0.0331 (8)
N20.7638 (3)0.2575 (3)0.3759 (3)0.0299 (8)
N30.8653 (4)0.0233 (3)0.4312 (3)0.0459 (11)
N40.9612 (3)0.2015 (3)0.4100 (4)0.0460 (11)
N50.4387 (3)0.1567 (3)0.2901 (3)0.0309 (8)
N6−0.0235 (3)−0.1609 (3)0.1722 (3)0.0307 (8)
C10.6283 (5)0.0024 (3)0.3741 (4)0.0429 (12)
H10.5471−0.00460.35570.051*
C20.6961 (6)−0.0750 (4)0.4043 (5)0.0548 (15)
H20.6629−0.13460.40500.066*
C30.8144 (5)−0.0602 (4)0.4332 (4)0.0518 (14)
H30.8614−0.11130.45530.062*
C40.7946 (4)0.0938 (3)0.3996 (3)0.0328 (10)
C50.8442 (4)0.1889 (3)0.3958 (3)0.0335 (10)
C60.9985 (4)0.2895 (4)0.4055 (5)0.0528 (15)
H61.07980.30090.41470.063*
C70.9233 (5)0.3644 (4)0.3880 (5)0.0562 (15)
H70.95160.42550.38580.067*
C80.8037 (4)0.3446 (4)0.3737 (4)0.0399 (11)
H80.74960.39350.36230.048*
C90.4280 (4)0.1042 (4)0.2051 (4)0.0386 (11)
H90.49100.10290.16610.046*
C100.3281 (4)0.0526 (3)0.1737 (4)0.0378 (11)
H100.32430.01660.11510.045*
C110.3444 (4)0.1639 (3)0.3396 (4)0.0336 (10)
H110.34860.20390.39510.040*
C120.2399 (4)0.1153 (3)0.3132 (4)0.0326 (10)
H120.17560.12280.35010.039*
C130.2324 (4)0.0551 (3)0.2310 (3)0.0295 (9)
C140.1326 (4)−0.0117 (3)0.2077 (4)0.0316 (10)
C150.0802 (4)−0.0526 (4)0.2857 (4)0.0383 (11)
H150.0956−0.02960.35140.046*
C160.0050 (4)−0.1276 (3)0.2654 (4)0.0378 (11)
H16−0.0273−0.15620.31880.045*
C170.0193 (4)−0.1170 (3)0.0946 (4)0.0348 (10)
H17−0.0041−0.13680.02870.042*
C180.0976 (4)−0.0428 (3)0.1113 (3)0.0335 (10)
H180.1269−0.01370.05670.040*
O10.8332 (5)0.1061 (6)0.1735 (4)0.114 (2)
O20.7807 (4)0.1965 (3)0.0279 (3)0.0648 (12)
O30.6646 (5)0.0702 (3)0.0637 (4)0.0770 (14)
O40.6684 (3)0.2050 (3)0.1635 (3)0.0522 (10)
O50.5763 (7)0.1934 (7)0.6933 (5)0.140 (3)
O60.6507 (6)0.0798 (4)0.6044 (5)0.111 (2)
O70.7399 (5)0.2209 (5)0.6042 (5)0.100 (2)
O80.5503 (4)0.1986 (3)0.5175 (3)0.0596 (11)
U11U22U33U12U13U23
Cu0.0195 (3)0.0221 (3)0.0458 (4)0.00049 (19)−0.0030 (2)0.0002 (2)
Cl10.0354 (6)0.0419 (7)0.0432 (7)0.0003 (5)0.0089 (5)0.0013 (5)
Cl20.0532 (8)0.0679 (9)0.0384 (7)−0.0110 (7)0.0023 (6)0.0033 (6)
N10.034 (2)0.0248 (19)0.040 (2)0.0037 (15)0.0016 (16)0.0017 (16)
N20.0261 (18)0.0251 (19)0.036 (2)0.0020 (15)−0.0055 (15)0.0004 (15)
N30.044 (2)0.043 (2)0.051 (3)0.020 (2)0.007 (2)0.011 (2)
N40.0232 (19)0.051 (3)0.061 (3)0.0069 (18)−0.0050 (18)0.000 (2)
N50.0236 (17)0.0280 (19)0.041 (2)−0.0027 (15)0.0019 (15)−0.0057 (16)
N60.0202 (16)0.0299 (19)0.041 (2)−0.0021 (14)−0.0016 (15)−0.0023 (16)
C10.048 (3)0.029 (2)0.051 (3)−0.003 (2)0.006 (2)0.001 (2)
C20.077 (4)0.030 (3)0.059 (4)0.007 (3)0.019 (3)0.006 (2)
C30.069 (4)0.035 (3)0.055 (3)0.023 (3)0.022 (3)0.012 (2)
C40.035 (2)0.033 (2)0.031 (2)0.0108 (19)0.0043 (18)0.0046 (18)
C50.028 (2)0.038 (3)0.033 (2)0.0066 (19)−0.0029 (18)−0.0033 (19)
C60.024 (2)0.058 (4)0.073 (4)−0.005 (2)−0.003 (2)−0.008 (3)
C70.035 (3)0.043 (3)0.088 (5)−0.008 (2)−0.004 (3)−0.004 (3)
C80.028 (2)0.037 (3)0.053 (3)−0.001 (2)−0.002 (2)−0.003 (2)
C90.027 (2)0.045 (3)0.046 (3)−0.008 (2)0.011 (2)−0.011 (2)
C100.030 (2)0.039 (3)0.045 (3)−0.007 (2)0.005 (2)−0.007 (2)
C110.031 (2)0.026 (2)0.043 (3)−0.0042 (18)0.0029 (19)−0.0080 (19)
C120.027 (2)0.032 (2)0.039 (2)−0.0031 (18)0.0076 (18)−0.0071 (19)
C130.024 (2)0.027 (2)0.037 (2)−0.0026 (17)0.0000 (17)−0.0003 (18)
C140.0207 (19)0.029 (2)0.045 (3)−0.0007 (17)0.0016 (18)−0.0006 (19)
C150.031 (2)0.042 (3)0.042 (3)−0.010 (2)0.0049 (19)−0.005 (2)
C160.033 (2)0.041 (3)0.040 (3)−0.011 (2)0.011 (2)−0.002 (2)
C170.032 (2)0.032 (2)0.038 (3)−0.0027 (19)−0.0050 (19)0.000 (2)
C180.034 (2)0.033 (2)0.032 (2)−0.0057 (19)−0.0001 (18)0.0025 (19)
O10.077 (3)0.183 (7)0.078 (4)0.063 (4)−0.006 (3)0.023 (4)
O20.071 (3)0.064 (3)0.065 (3)−0.014 (2)0.036 (2)0.002 (2)
O30.089 (3)0.047 (2)0.099 (4)−0.023 (2)0.028 (3)−0.021 (2)
O40.052 (2)0.053 (2)0.055 (2)−0.0009 (18)0.0210 (18)−0.0097 (18)
O50.116 (5)0.254 (10)0.054 (3)0.016 (6)0.026 (3)−0.011 (5)
O60.126 (5)0.068 (4)0.131 (5)0.011 (3)−0.023 (4)0.034 (4)
O70.083 (4)0.130 (5)0.083 (4)−0.041 (3)−0.004 (3)0.015 (3)
O80.056 (2)0.078 (3)0.044 (2)0.021 (2)0.0044 (18)0.012 (2)
Cu—N6i1.998 (4)C1—H10.9300
Cu—N12.007 (4)C2—C31.369 (9)
Cu—N22.008 (4)C2—H20.9300
Cu—N52.008 (4)C3—H30.9300
Cu—O82.421 (4)C4—C51.471 (7)
Cu—O42.634 (4)C6—C71.370 (8)
Cl1—O11.403 (5)C6—H60.9300
Cl1—O21.424 (4)C7—C81.377 (7)
Cl1—O31.438 (4)C7—H70.9300
Cl1—O41.442 (4)C8—H80.9300
Cl2—O51.354 (6)C9—C101.376 (6)
Cl2—O71.399 (6)C9—H90.9300
Cl2—O81.422 (4)C10—C131.395 (6)
Cl2—O61.464 (6)C10—H100.9300
N1—C11.339 (6)C11—C121.383 (6)
N1—C41.343 (6)C11—H110.9300
N2—C81.323 (6)C12—C131.385 (6)
N2—C51.343 (6)C12—H120.9300
N3—C41.325 (6)C13—C141.484 (6)
N3—C31.325 (7)C14—C181.372 (6)
N4—C61.329 (7)C14—C151.382 (7)
N4—C51.331 (6)C15—C161.376 (7)
N5—C111.321 (6)C15—H150.9300
N5—C91.350 (6)C16—H160.9300
N6—C161.332 (6)C17—C181.383 (6)
N6—C171.344 (6)C17—H170.9300
N6—Cuii1.998 (4)C18—H180.9300
C1—C21.379 (7)
N6i—Cu—N1175.53 (15)C2—C3—H3118.4
N6i—Cu—N295.45 (14)N3—C4—N1125.7 (4)
N1—Cu—N281.19 (15)N3—C4—C5119.4 (4)
N6i—Cu—N588.66 (15)N1—C4—C5114.9 (4)
N1—Cu—N595.15 (15)N4—C5—N2124.9 (5)
N2—Cu—N5169.48 (15)N4—C5—C4119.9 (4)
N6i—Cu—O892.65 (15)N2—C5—C4115.2 (4)
N1—Cu—O884.89 (15)N4—C6—C7123.4 (5)
N2—Cu—O897.45 (15)N4—C6—H6118.3
N5—Cu—O892.00 (15)C7—C6—H6118.3
N6i—Cu—O495.57 (14)C6—C7—C8116.6 (5)
N1—Cu—O486.74 (14)C6—C7—H7121.7
N2—Cu—O479.35 (14)C8—C7—H7121.7
N5—Cu—O490.64 (14)N2—C8—C7121.5 (5)
O8—Cu—O4171.41 (13)N2—C8—H8119.2
O1—Cl1—O2112.1 (4)C7—C8—H8119.2
O1—Cl1—O3109.9 (4)N5—C9—C10122.9 (4)
O2—Cl1—O3107.8 (3)N5—C9—H9118.5
O1—Cl1—O4110.2 (3)C10—C9—H9118.5
O2—Cl1—O4108.5 (3)C9—C10—C13119.0 (4)
O3—Cl1—O4108.3 (3)C9—C10—H10120.5
O5—Cl2—O7116.8 (5)C13—C10—H10120.5
O5—Cl2—O8113.6 (4)N5—C11—C12123.5 (4)
O7—Cl2—O8112.2 (3)N5—C11—H11118.2
O5—Cl2—O6104.4 (5)C12—C11—H11118.2
O7—Cl2—O6103.8 (4)C11—C12—C13119.0 (4)
O8—Cl2—O6104.4 (3)C11—C12—H12120.5
C1—N1—C4116.9 (4)C13—C12—H12120.5
C1—N1—Cu128.4 (3)C12—C13—C10117.7 (4)
C4—N1—Cu114.2 (3)C12—C13—C14122.6 (4)
C8—N2—C5117.6 (4)C10—C13—C14119.4 (4)
C8—N2—Cu128.2 (3)C18—C14—C15117.5 (4)
C5—N2—Cu114.1 (3)C18—C14—C13122.3 (4)
C4—N3—C3116.1 (5)C15—C14—C13119.8 (4)
C6—N4—C5116.0 (4)C16—C15—C14119.3 (5)
C11—N5—C9117.4 (4)C16—C15—H15120.3
C11—N5—Cu121.7 (3)C14—C15—H15120.3
C9—N5—Cu120.7 (3)N6—C16—C15122.6 (4)
C16—N6—C17118.6 (4)N6—C16—H16118.7
C16—N6—Cuii118.8 (3)C15—C16—H16118.7
C17—N6—Cuii121.2 (3)N6—C17—C18121.0 (4)
N1—C1—C2121.1 (5)N6—C17—H17119.5
N1—C1—H1119.5C18—C17—H17119.5
C2—C1—H1119.5C14—C18—C17120.6 (4)
C3—C2—C1117.0 (5)C14—C18—H18119.7
C3—C2—H2121.5C17—C18—H18119.7
C1—C2—H2121.5Cl1—O4—Cu137.6 (2)
N3—C3—C2123.2 (5)Cl2—O8—Cu129.2 (2)
N3—C3—H3118.4
D—H···AD—HH···AD···AD—H···A
C1—H1···O6iii0.932.593.415 (9)147
C6—H6···O2iv0.932.583.425 (7)151
C7—H7···O3v0.932.583.189 (7)124
C9—H9···O30.932.563.480 (7)171
C9—H9···O40.932.493.185 (6)132
C11—H11···O2vi0.932.463.342 (6)159
C16—H16···O4ii0.932.573.299 (6)135
C17—H17···O8ii0.932.473.082 (6)124
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C1—H1⋯O6i0.932.593.415 (9)147
C6—H6⋯O2ii0.932.583.425 (7)151
C7—H7⋯O3iii0.932.583.189 (7)124
C9—H9⋯O30.932.563.480 (7)171
C9—H9⋯O40.932.493.185 (6)132
C11—H11⋯O2iv0.932.463.342 (6)159
C16—H16⋯O4v0.932.573.299 (6)135
C17—H17⋯O8v0.932.473.082 (6)124

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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