Literature DB >> 21203015

A new monoclinic polymorph of dichlorido-tetra-kis(dimethyl sulfoxide)-ruthenium(II).

Gergana Georgieva, Galina Gencheva, Boris Lubomirov Shivachev, Rosica Petrova Nikolova.   

Abstract

The title compound, cis,fac-dichloridotetra-kis(dimethyl sulfoxide)-κ(3)S,κO-ruthenium(II), [RuCl(2)(C(2)H(6)OS)(4)], was obtained from newly synthesized ruthenium complexes of 3-amino-2-chloro-pyridine. The Ru atom has a distorted octa-hedral coordination with two cis-oriented chloride ligands and four dimethyl sulfoxide ligands. Three of the sulfoxide ligands are S-bonded in a fac configuration, while the fourth is O-bonded. The title compound represents a new, and fourth, polymorph of the complex. Two other monoclinic forms and an ortho-rhom-bic modification have been reported previously.

Entities:  

Year:  2008        PMID: 21203015      PMCID: PMC2961945          DOI: 10.1107/S160053680801996X

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For the geometric parameters and crystal structures of related polymorphs, see: Alessio et al. (1988 ▶); Attia & Calligaris (1987 ▶); Galanski et al. (2003 ▶); Mercer & Trotter (1975 ▶); Pigge et al. (2005 ▶); Srivastava & Fronczek (2003 ▶).

Experimental

Crystal data

[RuCl2(C2H6OS)4] M = 484.48 Monoclinic, a = 10.1479 (3) Å b = 10.4626 (3) Å c = 18.4280 (4) Å β = 99.795 (14)° V = 1928.04 (12) Å3 Z = 4 Mo Kα radiation μ = 1.53 mm−1 T = 290 (2) K 0.29 × 0.26 × 0.25 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: none 7705 measured reflections 3777 independent reflections 2953 reflections with I > 2σ(I) R int = 0.045 3 standard reflections frequency: 120 min intensity decay: 1%

Refinement

R[F 2 > 2σ(F 2)] = 0.034 wR(F 2) = 0.077 S = 1.03 3777 reflections 172 parameters H-atom parameters constrained Δρmax = 0.36 e Å−3 Δρmin = −0.64 e Å−3 Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: ORTEP-3 for Windows (Farrugia, 1997 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: WinGX (Farrugia, 1999 ▶). Crystal structure: contains datablocks I, global. DOI: 10.1107/S160053680801996X/fj2125sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S160053680801996X/fj2125Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
[RuCl2(C2H6OS)4]F(000) = 984
Mr = 484.48Dx = 1.669 Mg m3
Monoclinic, P21/cMelting point: not measured K
Hall symbol: -P 2ybcMo Kα radiation, λ = 0.71073 Å
a = 10.1479 (3) ÅCell parameters from 22 reflections
b = 10.4626 (3) Åθ = 18.2–19.2°
c = 18.4280 (4) ŵ = 1.53 mm1
β = 99.795 (14)°T = 290 K
V = 1928.04 (12) Å3Prism, orange
Z = 40.29 × 0.26 × 0.25 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.045
Radiation source: Enraf Nonius FR590θmax = 26.0°, θmin = 2.0°
graphiteh = 0→12
non–profiled ω/2θ scansk = −12→12
7705 measured reflectionsl = −22→22
3777 independent reflections3 standard reflections every 120 min
2953 reflections with I > 2σ(I) intensity decay: 1%
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.034Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.077H-atom parameters constrained
S = 1.03w = 1/[σ2(Fo2) + (0.0294P)2] where P = (Fo2 + 2Fc2)/3
3777 reflections(Δ/σ)max < 0.001
172 parametersΔρmax = 0.36 e Å3
0 restraintsΔρmin = −0.64 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
O110.2531 (3)−0.0625 (3)0.32395 (16)0.0530 (8)
O210.0063 (3)0.0806 (3)0.41116 (15)0.0465 (7)
O310.0400 (3)0.1627 (3)0.23279 (15)0.0543 (8)
O410.2122 (3)0.4088 (2)0.42297 (14)0.0400 (6)
C120.5002 (4)0.0204 (5)0.3510 (2)0.0603 (13)
H12A0.55310.09580.34870.09*
H12B0.5283−0.04480.32030.09*
H12C0.5116−0.00950.40090.09*
C130.3327 (5)0.0822 (4)0.2244 (2)0.0566 (13)
H13A0.24480.10370.19920.085*
H13B0.36270.00570.20360.085*
H13C0.39310.15090.21920.085*
C220.1268 (5)0.2105 (4)0.5245 (2)0.0557 (12)
H22A0.08380.29060.51040.084*
H22B0.2140.2260.55270.084*
H22C0.07420.1630.55380.084*
C230.2246 (4)−0.0186 (4)0.4854 (2)0.0539 (12)
H23A0.31440.00270.50770.081*
H23B0.2265−0.08320.44860.081*
H23C0.1769−0.05020.52240.081*
C32−0.0494 (4)0.3293 (5)0.3199 (2)0.0556 (12)
H32A−0.02070.39820.35320.083*
H32B−0.0870.26250.34570.083*
H32C−0.11580.35990.28030.083*
C330.1154 (5)0.4007 (4)0.2276 (2)0.0583 (13)
H33A0.1910.38420.20390.087*
H33B0.1320.47590.25760.087*
H33C0.03720.41340.19090.087*
C420.2707 (6)0.6430 (4)0.3906 (3)0.0814 (19)
H42A0.28910.62650.34210.122*
H42B0.31930.71740.41050.122*
H42C0.17660.65750.38810.122*
C430.2747 (6)0.5653 (6)0.5310 (3)0.094 (2)
H43A0.29690.50160.56860.141*
H43B0.18030.58150.52340.141*
H43C0.32230.64280.5460.141*
Ru10.26756 (3)0.23282 (3)0.374946 (14)0.02744 (9)
Cl10.44805 (10)0.21704 (9)0.48035 (5)0.0419 (2)
Cl20.41776 (11)0.35631 (11)0.31431 (6)0.0504 (3)
S110.32820 (10)0.05696 (9)0.31955 (5)0.0368 (2)
S210.14273 (9)0.12074 (9)0.44360 (5)0.0336 (2)
S310.08979 (10)0.26855 (9)0.28370 (5)0.0367 (2)
S410.32033 (11)0.50995 (9)0.44793 (6)0.0416 (3)
U11U22U33U12U13U23
O110.069 (2)0.0322 (15)0.0534 (18)−0.0047 (15)−0.0011 (16)−0.0051 (13)
O210.0335 (15)0.0581 (18)0.0453 (16)−0.0134 (13)−0.0011 (13)0.0070 (14)
O310.0523 (18)0.0505 (18)0.0508 (18)0.0058 (15)−0.0175 (15)−0.0114 (14)
O410.0403 (15)0.0342 (14)0.0439 (16)−0.0031 (12)0.0024 (13)−0.0058 (12)
C120.046 (3)0.073 (3)0.056 (3)0.024 (2)−0.007 (2)−0.014 (2)
C130.072 (3)0.071 (3)0.027 (2)0.020 (3)0.009 (2)−0.005 (2)
C220.063 (3)0.070 (3)0.037 (2)−0.018 (2)0.019 (2)−0.010 (2)
C230.053 (3)0.051 (3)0.056 (3)−0.001 (2)0.005 (2)0.023 (2)
C320.041 (2)0.071 (3)0.052 (3)0.021 (2)−0.002 (2)0.001 (2)
C330.073 (3)0.058 (3)0.041 (2)0.009 (3)0.001 (2)0.020 (2)
C420.101 (4)0.033 (2)0.096 (4)−0.009 (3)−0.023 (4)0.012 (3)
C430.129 (6)0.099 (5)0.059 (3)−0.055 (4)0.029 (4)−0.043 (3)
Ru10.02955 (16)0.02723 (15)0.02414 (15)−0.00181 (12)0.00061 (11)0.00173 (12)
Cl10.0378 (5)0.0465 (6)0.0364 (5)−0.0057 (4)−0.0081 (4)0.0024 (4)
Cl20.0538 (7)0.0539 (6)0.0456 (6)−0.0136 (5)0.0145 (5)0.0090 (5)
S110.0389 (5)0.0376 (5)0.0310 (5)0.0053 (4)−0.0018 (4)−0.0038 (4)
S210.0341 (5)0.0369 (5)0.0285 (5)−0.0058 (4)0.0010 (4)0.0031 (4)
S310.0396 (5)0.0357 (5)0.0311 (5)0.0054 (4)−0.0045 (4)0.0015 (4)
S410.0448 (6)0.0339 (5)0.0433 (6)−0.0039 (4)−0.0007 (5)−0.0037 (4)
O11—S111.473 (3)C32—S311.779 (4)
O21—S211.473 (3)C32—H32A0.96
O31—S311.484 (3)C32—H32B0.96
O41—S411.538 (3)C32—H32C0.96
O41—Ru12.158 (3)C33—S311.772 (4)
C12—S111.784 (4)C33—H33A0.96
C12—H12A0.96C33—H33B0.96
C12—H12B0.96C33—H33C0.96
C12—H12C0.96C42—S411.769 (4)
C13—S111.781 (4)C42—H42A0.96
C13—H13A0.96C42—H42B0.96
C13—H13B0.96C42—H42C0.96
C13—H13C0.96C43—S411.770 (5)
C22—S211.792 (4)C43—H43A0.96
C22—H22A0.96C43—H43B0.96
C22—H22B0.96C43—H43C0.96
C22—H22C0.96Ru1—S112.2404 (10)
C23—S211.786 (4)Ru1—S212.2640 (10)
C23—H23A0.96Ru1—S312.2780 (10)
C23—H23B0.96Ru1—Cl22.4126 (11)
C23—H23C0.96Ru1—Cl12.4380 (10)
S41—O41—Ru1119.18 (15)S41—C43—H43A109.5
S11—C12—H12A109.5S41—C43—H43B109.5
S11—C12—H12B109.5H43A—C43—H43B109.5
H12A—C12—H12B109.5S41—C43—H43C109.5
S11—C12—H12C109.5H43A—C43—H43C109.5
H12A—C12—H12C109.5H43B—C43—H43C109.5
H12B—C12—H12C109.5O41—Ru1—S11176.60 (8)
S11—C13—H13A109.5O41—Ru1—S2190.19 (8)
S11—C13—H13B109.5S11—Ru1—S2193.00 (4)
H13A—C13—H13B109.5O41—Ru1—S3186.21 (7)
S11—C13—H13C109.5S11—Ru1—S3192.46 (3)
H13A—C13—H13C109.5S21—Ru1—S3192.82 (4)
H13B—C13—H13C109.5O41—Ru1—Cl287.83 (8)
S21—C22—H22A109.5S11—Ru1—Cl289.12 (4)
S21—C22—H22B109.5S21—Ru1—Cl2173.64 (4)
H22A—C22—H22B109.5S31—Ru1—Cl293.07 (4)
S21—C22—H22C109.5O41—Ru1—Cl186.78 (7)
H22A—C22—H22C109.5S11—Ru1—Cl194.59 (4)
H22B—C22—H22C109.5S21—Ru1—Cl186.31 (3)
S21—C23—H23A109.5S31—Ru1—Cl1172.93 (4)
S21—C23—H23B109.5Cl2—Ru1—Cl187.54 (4)
H23A—C23—H23B109.5O11—S11—C13106.3 (2)
S21—C23—H23C109.5O11—S11—C12106.7 (2)
H23A—C23—H23C109.5C13—S11—C1299.4 (2)
H23B—C23—H23C109.5O11—S11—Ru1119.14 (14)
S31—C32—H32A109.5C13—S11—Ru1112.43 (15)
S31—C32—H32B109.5C12—S11—Ru1110.94 (15)
H32A—C32—H32B109.5O21—S21—C23106.15 (19)
S31—C32—H32C109.5O21—S21—C22106.02 (19)
H32A—C32—H32C109.5C23—S21—C2299.8 (2)
H32B—C32—H32C109.5O21—S21—Ru1119.85 (12)
S31—C33—H33A109.5C23—S21—Ru1113.59 (15)
S31—C33—H33B109.5C22—S21—Ru1109.35 (15)
H33A—C33—H33B109.5O31—S31—C33106.36 (19)
S31—C33—H33C109.5O31—S31—C32107.3 (2)
H33A—C33—H33C109.5C33—S31—C3298.3 (2)
H33B—C33—H33C109.5O31—S31—Ru1119.07 (12)
S41—C42—H42A109.5C33—S31—Ru1112.47 (16)
S41—C42—H42B109.5C32—S31—Ru1111.21 (14)
H42A—C42—H42B109.5O41—S41—C42104.3 (2)
S41—C42—H42C109.5O41—S41—C43101.9 (2)
H42A—C42—H42C109.5C42—S41—C4399.7 (3)
H42B—C42—H42C109.5
S41—O41—Ru1—S21135.85 (16)S11—Ru1—S21—C2345.78 (17)
S41—O41—Ru1—S31−131.33 (16)S31—Ru1—S21—C23138.39 (17)
S41—O41—Ru1—Cl2−38.11 (16)Cl1—Ru1—S21—C23−48.64 (17)
S41—O41—Ru1—Cl149.55 (16)O41—Ru1—S21—C22−24.90 (19)
S21—Ru1—S11—O1115.75 (14)S11—Ru1—S21—C22156.27 (17)
S31—Ru1—S11—O11−77.21 (14)S31—Ru1—S21—C22−111.12 (17)
Cl2—Ru1—S11—O11−170.25 (14)Cl1—Ru1—S21—C2261.86 (17)
Cl1—Ru1—S11—O11102.29 (14)O41—Ru1—S31—O31−165.41 (17)
S21—Ru1—S11—C13141.01 (18)S11—Ru1—S31—O3117.72 (16)
S31—Ru1—S11—C1348.05 (18)S21—Ru1—S31—O31−75.41 (16)
Cl2—Ru1—S11—C13−44.99 (18)Cl2—Ru1—S31—O31106.97 (16)
Cl1—Ru1—S11—C13−132.46 (18)O41—Ru1—S31—C3369.24 (19)
S21—Ru1—S11—C12−108.64 (18)S11—Ru1—S31—C33−107.63 (18)
S31—Ru1—S11—C12158.40 (18)S21—Ru1—S31—C33159.24 (17)
Cl2—Ru1—S11—C1265.36 (18)Cl2—Ru1—S31—C33−18.38 (18)
Cl1—Ru1—S11—C12−22.10 (18)O41—Ru1—S31—C32−39.94 (19)
O41—Ru1—S21—O2197.69 (16)S11—Ru1—S31—C32143.19 (18)
S11—Ru1—S21—O21−81.13 (15)S21—Ru1—S31—C3250.06 (18)
S31—Ru1—S21—O2111.48 (15)Cl2—Ru1—S31—C32−127.56 (18)
Cl1—Ru1—S21—O21−175.54 (15)Ru1—O41—S41—C42116.2 (2)
O41—Ru1—S21—C23−135.40 (18)Ru1—O41—S41—C43−140.4 (3)
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