| Literature DB >> 21202984 |
Sylvain Bernès, Guadalupe Hernández, Roberto Portillo, René Gutiérrez.
Abstract
The structure of the title solvate, C(9)H(6)O(6)·C(2)H(6)OS, was determined 30 years ago [Herbstein, Kapon & Wasserman (1978 ▶). Acta Cryst. B34, 1613-1617], with data collected at room temperature, and refined in the space group P2(1). The present redetermination, based on high-resolution diffraction data, shows that the actual space group is more likely to be P2(1)/m. The crystal structure contains layers of trimesic acid molecules lying on mirror planes. A mirror plane also passes through the S and O atoms of the solvent molecule. The molecules in each layer are inter-connected through strong O-H⋯O hydrogen bonds, forming a two-dimensional supra-molecular network within each layer. The donor groups are the hydroxyls of the trimesic acid mol-ecules, while the acceptors are the carbonyl or the sulfoxide O atoms.Entities:
Year: 2008 PMID: 21202984 PMCID: PMC2961820 DOI: 10.1107/S1600536808018655
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C9H6O6·C2H6OS | |
| Monoclinic, | Mo |
| Hall symbol: -P 2yb | Cell parameters from 45 reflections |
| θ = 4.7–13.8º | |
| µ = 0.28 mm−1 | |
| β = 96.195 (5)º | Cell measurement pressure: 101(2) kPa |
| Prism, colourless | |
| 0.60 × 0.48 × 0.36 mm |
| Siemens P4 diffractometer | 1772 reflections with |
| Radiation source: fine-focus sealed tube | |
| Monochromator: graphite | θmax = 30.0º |
| θmin = 1.9º | |
| 2θ/ω scans | |
| Absorption correction: ψ scan(XSCANS; Siemens, 1996) | |
| 3 standard reflections | |
| 4582 measured reflections | every 97 reflections |
| 2007 independent reflections | intensity decay: <1% |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: difference Fourier map |
| H atoms treated by a mixture of independent and constrained refinement | |
| | |
| (Δ/σ)max < 0.001 | |
| 2007 reflections | Δρmax = 0.38 e Å−3 |
| 123 parameters | Δρmin = −0.30 e Å−3 |
| 20 constraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.040 (9) |
| C1 | 0.60335 (14) | 0.2500 | 0.50040 (13) | 0.0315 (3) | |
| C2 | 0.65053 (16) | 0.2500 | 0.38033 (13) | 0.0356 (3) | |
| H2A | 0.5773 | 0.2500 | 0.3106 | 0.043* | |
| C3 | 0.80576 (16) | 0.2500 | 0.36384 (12) | 0.0355 (3) | |
| C4 | 0.91692 (16) | 0.2500 | 0.46759 (13) | 0.0361 (3) | |
| H4A | 1.0210 | 0.2500 | 0.4567 | 0.043* | |
| C5 | 0.86956 (15) | 0.2500 | 0.58847 (12) | 0.0333 (3) | |
| C6 | 0.71358 (15) | 0.2500 | 0.60405 (13) | 0.0325 (3) | |
| H6A | 0.6829 | 0.2500 | 0.6845 | 0.039* | |
| C7 | 0.43539 (16) | 0.2500 | 0.51484 (15) | 0.0363 (3) | |
| C8 | 0.84857 (18) | 0.2500 | 0.23234 (14) | 0.0428 (4) | |
| C9 | 0.98606 (16) | 0.2500 | 0.70011 (13) | 0.0382 (4) | |
| O1 | 0.40892 (13) | 0.2500 | 0.63458 (12) | 0.0512 (4) | |
| H1 | 0.314 (4) | 0.2500 | 0.640 (3) | 0.079 (9)* | |
| O2 | 0.33561 (13) | 0.2500 | 0.42797 (12) | 0.0527 (4) | |
| O3 | 0.99843 (14) | 0.2500 | 0.22789 (12) | 0.0648 (5) | |
| H3 | 1.018 (4) | 0.2500 | 0.152 (4) | 0.105 (12)* | |
| O4 | 0.75495 (16) | 0.2500 | 0.14056 (11) | 0.0610 (4) | |
| O5 | 0.92574 (13) | 0.2500 | 0.80719 (10) | 0.0548 (4) | |
| H5 | 0.998 (3) | 0.2500 | 0.868 (3) | 0.063 (7)* | |
| O6 | 1.12357 (13) | 0.2500 | 0.69470 (12) | 0.0600 (4) | |
| S1 | 0.28919 (4) | 0.2500 | 0.01135 (3) | 0.04770 (18) | |
| C10 | 0.35278 (17) | 0.0539 (3) | 0.11302 (15) | 0.0600 (4) | |
| H10A | 0.4632 | 0.0522 | 0.1249 | 0.090* | |
| H10B | 0.3158 | −0.0677 | 0.0764 | 0.090* | |
| H10C | 0.3137 | 0.0713 | 0.1927 | 0.090* | |
| O7 | 0.11484 (13) | 0.2500 | 0.00856 (11) | 0.0620 (5) |
| C1 | 0.0208 (5) | 0.0452 (7) | 0.0285 (6) | 0.000 | 0.0028 (4) | 0.000 |
| C2 | 0.0258 (6) | 0.0547 (9) | 0.0257 (6) | 0.000 | 0.0002 (5) | 0.000 |
| C3 | 0.0276 (6) | 0.0578 (9) | 0.0212 (6) | 0.000 | 0.0037 (4) | 0.000 |
| C4 | 0.0239 (6) | 0.0595 (9) | 0.0251 (6) | 0.000 | 0.0043 (5) | 0.000 |
| C5 | 0.0229 (5) | 0.0545 (8) | 0.0226 (5) | 0.000 | 0.0023 (4) | 0.000 |
| C6 | 0.0236 (6) | 0.0498 (8) | 0.0246 (6) | 0.000 | 0.0045 (4) | 0.000 |
| C7 | 0.0227 (6) | 0.0491 (8) | 0.0371 (7) | 0.000 | 0.0032 (5) | 0.000 |
| C8 | 0.0327 (7) | 0.0727 (11) | 0.0236 (6) | 0.000 | 0.0052 (5) | 0.000 |
| C9 | 0.0233 (6) | 0.0678 (10) | 0.0234 (6) | 0.000 | 0.0025 (4) | 0.000 |
| O1 | 0.0227 (5) | 0.0914 (10) | 0.0407 (6) | 0.000 | 0.0092 (4) | 0.000 |
| O2 | 0.0261 (5) | 0.0874 (10) | 0.0433 (7) | 0.000 | −0.0024 (4) | 0.000 |
| O3 | 0.0320 (6) | 0.1391 (16) | 0.0244 (5) | 0.000 | 0.0083 (4) | 0.000 |
| O4 | 0.0401 (6) | 0.1171 (13) | 0.0247 (5) | 0.000 | −0.0012 (4) | 0.000 |
| O5 | 0.0266 (5) | 0.1159 (12) | 0.0218 (5) | 0.000 | 0.0026 (4) | 0.000 |
| O6 | 0.0216 (5) | 0.1258 (13) | 0.0330 (6) | 0.000 | 0.0042 (4) | 0.000 |
| S1 | 0.0287 (2) | 0.0895 (4) | 0.0254 (2) | 0.000 | 0.00491 (13) | 0.000 |
| C10 | 0.0550 (8) | 0.0642 (9) | 0.0587 (8) | −0.0010 (7) | −0.0031 (6) | −0.0050 (7) |
| O7 | 0.0275 (5) | 0.1342 (15) | 0.0238 (5) | 0.000 | 0.0010 (4) | 0.000 |
| C1—C6 | 1.3895 (18) | C8—O4 | 1.2095 (19) |
| C1—C2 | 1.3925 (19) | C8—O3 | 1.3165 (19) |
| C1—C7 | 1.4933 (18) | C9—O6 | 1.2101 (17) |
| C2—C3 | 1.3876 (19) | C9—O5 | 1.3131 (17) |
| C2—H2A | 0.9300 | O1—H1 | 0.84 (3) |
| C3—C4 | 1.3952 (19) | O3—H3 | 0.85 (4) |
| C3—C8 | 1.496 (2) | O5—H5 | 0.86 (3) |
| C4—C5 | 1.4014 (18) | S1—O7 | 1.5217 (12) |
| C4—H4A | 0.9300 | S1—C10i | 1.7781 (17) |
| C5—C6 | 1.3918 (18) | S1—C10 | 1.7781 (17) |
| C5—C9 | 1.4849 (19) | C10—H10A | 0.9600 |
| C6—H6A | 0.9300 | C10—H10B | 0.9600 |
| C7—O2 | 1.2049 (19) | C10—H10C | 0.9600 |
| C7—O1 | 1.3277 (19) | ||
| C6—C1—C2 | 119.26 (12) | O1—C7—C1 | 112.08 (12) |
| C6—C1—C7 | 121.50 (12) | O4—C8—O3 | 124.03 (14) |
| C2—C1—C7 | 119.24 (12) | O4—C8—C3 | 123.31 (15) |
| C3—C2—C1 | 120.60 (12) | O3—C8—C3 | 112.66 (13) |
| C3—C2—H2A | 119.7 | O6—C9—O5 | 122.46 (13) |
| C1—C2—H2A | 119.7 | O6—C9—C5 | 124.08 (13) |
| C2—C3—C4 | 120.37 (12) | O5—C9—C5 | 113.46 (12) |
| C2—C3—C8 | 117.87 (12) | C7—O1—H1 | 110 (2) |
| C4—C3—C8 | 121.76 (13) | C8—O3—H3 | 110 (2) |
| C3—C4—C5 | 119.08 (12) | C9—O5—H5 | 109.3 (19) |
| C3—C4—H4A | 120.5 | O7—S1—C10i | 104.98 (6) |
| C5—C4—H4A | 120.5 | O7—S1—C10 | 104.98 (6) |
| C6—C5—C4 | 120.13 (12) | C10i—S1—C10 | 97.87 (11) |
| C6—C5—C9 | 119.97 (12) | S1—C10—H10A | 109.5 |
| C4—C5—C9 | 119.91 (12) | S1—C10—H10B | 109.5 |
| C1—C6—C5 | 120.56 (12) | H10A—C10—H10B | 109.5 |
| C1—C6—H6A | 119.7 | S1—C10—H10C | 109.5 |
| C5—C6—H6A | 119.7 | H10A—C10—H10C | 109.5 |
| O2—C7—O1 | 123.97 (14) | H10B—C10—H10C | 109.5 |
| O2—C7—C1 | 123.94 (14) | ||
| C6—C1—C2—C3 | 0.0 | C6—C1—C7—O2 | 180.0 |
| C7—C1—C2—C3 | 180.0 | C2—C1—C7—O2 | 0.0 |
| C1—C2—C3—C4 | 0.0 | C6—C1—C7—O1 | 0.0 |
| C1—C2—C3—C8 | 180.0 | C2—C1—C7—O1 | 180.0 |
| C2—C3—C4—C5 | 0.0 | C2—C3—C8—O4 | 0.0 |
| C8—C3—C4—C5 | 180.0 | C4—C3—C8—O4 | 180.0 |
| C3—C4—C5—C6 | 0.0 | C2—C3—C8—O3 | 180.0 |
| C3—C4—C5—C9 | 180.0 | C4—C3—C8—O3 | 0.0 |
| C2—C1—C6—C5 | 0.0 | C6—C5—C9—O6 | 180.0 |
| C7—C1—C6—C5 | 180.0 | C4—C5—C9—O6 | 0.0 |
| C4—C5—C6—C1 | 0.0 | C6—C5—C9—O5 | 0.0 |
| C9—C5—C6—C1 | 180.0 | C4—C5—C9—O5 | 180.0 |
| H··· | ||||
| O1—H1···O6ii | 0.84 (3) | 1.82 (3) | 2.6435 (16) | 165 (3) |
| O3—H3···O7iii | 0.85 (4) | 1.83 (4) | 2.6593 (17) | 164 (4) |
| O5—H5···O7iv | 0.86 (3) | 1.73 (3) | 2.5723 (16) | 169 (3) |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| O1—H1⋯O6i | 0.84 (3) | 1.82 (3) | 2.6435 (16) | 165 (3) |
| O3—H3⋯O7ii | 0.85 (4) | 1.83 (4) | 2.6593 (17) | 164 (4) |
| O5—H5⋯O7iii | 0.86 (3) | 1.73 (3) | 2.5723 (16) | 169 (3) |
Symmetry codes: (i) ; (ii) ; (iii) .