Literature DB >> 21202979

4-(2,3-Dimethyl-phen-yl)piperazin-1-ium chloride monohydrate.

Imen Ben Gharbia, Riadh Kefi, Meher El Glaoui, Erwann Jeanneau, Cherif Ben Nasr.   

Abstract

The title compound, C(12)H(19)N(2) (+)·Cl(-)·H(2)O, contains a network of 4-(2,3-dimethyl-phen-yl)piperazin-1-ium cations, water mol-ecules and chloride anions. The crystal packing is influenced by O-H⋯Cl, N-H⋯Cl, N-H⋯O, C-H⋯O and C-H⋯Cl hydrogen bonds, resulting in structure with an open-framework architecture.

Entities:  

Year:  2008        PMID: 21202979      PMCID: PMC2961679          DOI: 10.1107/S1600536808019016

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Ben Gharbia et al. (2005 ▶, 2007 ▶); Bernstein et al. (1995 ▶); Pajewski et al. (2004 ▶); Sessler et al. (2003 ▶); Schmidtchen & Berge (1997 ▶). For the refinement weighting scheme, see: Prince (1982 ▶); Watkin (1994 ▶).

Experimental

Crystal data

C12H19N2 +·Cl−·H2O M = 244.76 Triclinic, a = 7.5439 (3) Å b = 9.4204 (3) Å c = 10.4347 (4) Å α = 72.733 (2)° β = 74.152 (2)° γ = 70.250 (2)° V = 654.05 (4) Å3 Z = 2 Mo Kα radiation μ = 0.28 mm−1 T = 150 K 0.13 × 0.12 × 0.09 mm

Data collection

Nonius KappaCCD diffractometer Absorption correction: none 5719 measured reflections 3073 independent reflections 2601 reflections with I > 2σ(I) R int = 0.016

Refinement

R[F 2 > 2σ(F 2)] = 0.036 wR(F 2) = 0.035 S = 1.10 2491 reflections 145 parameters H-atom parameters constrained Δρmax = 0.25 e Å−3 Δρmin = −0.20 e Å−3 Data collection: COLLECT (Nonius, 2001 ▶); cell refinement: DENZO/SCALEPACK (Otwinowski & Minor, 1997 ▶); data reduction: DENZO/SCALEPACK; program(s) used to solve structure: SIR97 (Altomare et al., 1999 ▶); program(s) used to refine structure: CRYSTALS (Betteridge et al., 2003 ▶); molecular graphics: DIAMOND (Brandenburg, 1998 ▶); software used to prepare material for publication: CRYSTALS. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808019016/cf2207sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808019016/cf2207Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C12H19N2+·Cl·H2OZ = 2
Mr = 244.76F000 = 264
Triclinic, P1Dx = 1.243 Mg m3
Hall symbol: -P 1Mo Kα radiation λ = 0.71069 Å
a = 7.5439 (3) ÅCell parameters from 2750 reflections
b = 9.4204 (3) Åθ = 0.4–27.9º
c = 10.4347 (4) ŵ = 0.28 mm1
α = 72.733 (2)ºT = 150 K
β = 74.152 (2)ºBlock, colorless
γ = 70.250 (2)º0.13 × 0.12 × 0.09 mm
V = 654.05 (4) Å3
Nonius KappaCCD diffractometer2601 reflections with I > 2σ(I)
Monochromator: graphiteRint = 0.016
T = 150 Kθmax = 27.9º
φ and ω scansθmin = 2.1º
Absorption correction: noneh = −9→9
5719 measured reflectionsk = −12→12
3073 independent reflectionsl = −13→13
Refinement on FHydrogen site location: inferred from neighbouring sites
Least-squares matrix: fullH-atom parameters constrained
R[F2 > 2σ(F2)] = 0.036  w = [1-(Fo-Fc)2/36σ2(F)]2/[0.443T0(x) + 0.129T1(x) + 0.131T2(x)] where Ti are Chebychev polynomials and x = Fc/Fmax (Prince, 1982; Watkin, 1994)
wR(F2) = 0.035(Δ/σ)max = 0.0004
S = 1.10Δρmax = 0.25 e Å3
2491 reflectionsΔρmin = −0.20 e Å3
145 parametersExtinction correction: None
Primary atom site location: structure-invariant direct methods
xyzUiso*/Ueq
C1−0.09326 (17)0.26100 (14)0.53871 (13)0.0211
C2−0.08069 (18)0.18226 (14)0.67481 (13)0.0224
C3−0.24822 (19)0.15986 (14)0.76843 (13)0.0243
C4−0.42381 (18)0.21709 (15)0.72522 (14)0.0270
C5−0.43454 (18)0.29399 (16)0.59077 (14)0.0285
C6−0.26999 (18)0.31526 (15)0.49687 (13)0.0255
C70.18840 (18)0.14963 (15)0.38467 (14)0.0276
C80.38588 (19)0.16564 (16)0.30991 (15)0.0313
C90.24578 (19)0.45044 (15)0.26085 (13)0.0260
C100.05184 (17)0.42554 (14)0.33543 (13)0.0230
C110.1080 (2)0.12337 (17)0.72288 (15)0.0320
C12−0.2398 (2)0.07656 (18)0.91485 (14)0.0353
Cl10.77820 (5)0.34324 (4)0.11653 (4)0.0340
O10.78625 (14)0.68790 (12)0.00994 (10)0.0353
N10.07922 (14)0.28419 (12)0.44468 (11)0.0216
N20.36750 (15)0.31276 (13)0.20308 (12)0.0278
H10.78480.59950.05260.0528*
H20.90070.6873−0.01820.0528*
H30.48450.32700.16610.0430*
H40.31440.30850.13580.0437*
H5−0.53850.20580.79160.0322*
H6−0.55650.33520.56100.0341*
H7−0.27700.36590.40450.0295*
H80.11980.14100.32000.0321*
H90.20400.05610.45750.0315*
H100.45880.07900.26440.0369*
H110.45820.16950.37490.0356*
H120.31140.46420.32200.0314*
H130.22990.54290.18500.0309*
H14−0.02660.51620.37730.0269*
H15−0.01410.41800.26840.0273*
H160.20870.15940.65140.0467*
H170.14840.00980.74640.0473*
H180.09400.16060.80470.0484*
H19−0.1476−0.02820.91970.0537*
H20−0.20110.13640.95870.0526*
H21−0.36710.06790.96390.0532*
U11U22U33U12U13U23
C10.0204 (5)0.0193 (5)0.0239 (6)−0.0065 (4)−0.0025 (4)−0.0057 (5)
C20.0250 (6)0.0184 (5)0.0251 (6)−0.0079 (5)−0.0054 (5)−0.0040 (5)
C30.0289 (6)0.0211 (6)0.0243 (6)−0.0104 (5)−0.0022 (5)−0.0059 (5)
C40.0243 (6)0.0269 (6)0.0298 (7)−0.0099 (5)0.0020 (5)−0.0098 (5)
C50.0213 (6)0.0308 (7)0.0331 (7)−0.0073 (5)−0.0039 (5)−0.0081 (6)
C60.0231 (6)0.0273 (6)0.0250 (6)−0.0079 (5)−0.0040 (5)−0.0040 (5)
C70.0241 (6)0.0215 (6)0.0347 (7)−0.0077 (5)0.0025 (5)−0.0088 (5)
C80.0229 (6)0.0274 (7)0.0392 (8)−0.0073 (5)0.0025 (5)−0.0088 (6)
C90.0289 (6)0.0260 (6)0.0255 (6)−0.0128 (5)−0.0024 (5)−0.0061 (5)
C100.0236 (6)0.0224 (6)0.0220 (6)−0.0081 (5)−0.0026 (5)−0.0034 (5)
C110.0286 (7)0.0337 (7)0.0317 (7)−0.0115 (6)−0.0113 (5)0.0038 (6)
C120.0452 (8)0.0378 (8)0.0246 (7)−0.0210 (7)−0.0034 (6)−0.0016 (6)
Cl10.02788 (17)0.0430 (2)0.03519 (18)−0.01831 (14)−0.00224 (13)−0.00861 (14)
O10.0303 (5)0.0377 (6)0.0367 (5)−0.0128 (4)0.0007 (4)−0.0094 (4)
N10.0205 (5)0.0191 (5)0.0234 (5)−0.0059 (4)−0.0013 (4)−0.0044 (4)
N20.0229 (5)0.0332 (6)0.0291 (6)−0.0136 (4)0.0028 (4)−0.0101 (5)
C9—C101.5176 (17)C6—H70.947
C9—N21.4986 (17)C5—C41.3851 (19)
C9—H120.966C5—H60.968
C9—H130.985C4—C31.3957 (19)
C10—N11.4686 (16)C4—H50.965
C10—H141.005C3—C21.4070 (17)
C10—H150.993C3—C121.5038 (19)
C7—C81.5159 (17)C2—C111.5090 (17)
C7—N11.4701 (16)C12—H210.975
C7—H90.974C12—H200.974
C7—H80.991C12—H190.993
C8—N21.4900 (18)C11—H180.983
C8—H110.995C11—H160.981
C8—H100.989C11—H170.981
C1—C61.3979 (17)O1—H10.822
C1—C21.4060 (17)O1—H20.831
C1—N11.4391 (15)N2—H30.900
C6—C51.3886 (18)N2—H40.914
C10—C9—N2109.56 (10)C4—C5—H6120.8
C10—C9—H12111.0C5—C4—C3120.72 (12)
N2—C9—H12108.8C5—C4—H5120.5
C10—C9—H13110.3C3—C4—H5118.7
N2—C9—H13108.5C4—C3—C2119.63 (12)
H12—C9—H13108.6C4—C3—C12119.84 (12)
C9—C10—N1109.41 (10)C2—C3—C12120.53 (12)
C9—C10—H14109.0C3—C2—C1119.20 (11)
N1—C10—H14108.9C3—C2—C11119.40 (12)
C9—C10—H15108.6C1—C2—C11121.39 (11)
N1—C10—H15111.3C3—C12—H21109.5
H14—C10—H15109.6C3—C12—H20109.5
C8—C7—N1110.04 (10)H21—C12—H20107.6
C8—C7—H9108.4C3—C12—H19110.4
N1—C7—H9109.2H21—C12—H19109.8
C8—C7—H8109.4H20—C12—H19109.9
N1—C7—H8110.2C2—C11—H18109.7
H9—C7—H8109.5C2—C11—H16110.8
C7—C8—N2109.88 (11)H18—C11—H16109.0
C7—C8—H11110.1C2—C11—H17110.4
N2—C8—H11107.8H18—C11—H17108.5
C7—C8—H10111.2H16—C11—H17108.4
N2—C8—H10108.0H1—O1—H2107.1
H11—C8—H10109.9C7—N1—C10109.62 (10)
C6—C1—C2120.31 (11)C7—N1—C1112.16 (9)
C6—C1—N1121.24 (11)C10—N1—C1115.19 (10)
C2—C1—N1118.45 (11)C9—N2—C8112.04 (10)
C1—C6—C5119.86 (12)C9—N2—H3107.5
C1—C6—H7119.9C8—N2—H3109.3
C5—C6—H7120.2C9—N2—H4108.6
C6—C5—C4120.27 (12)C8—N2—H4110.2
C6—C5—H6118.9H3—N2—H4109.1
D—H···AD—HH···AD···AD—H···A
N2—H3···Cl10.902.183.069 (1)169
N2—H4···O1i0.911.862.776 (2)175
O1—H1···Cl10.822.323.120 (1)165
O1—H2···Cl1ii0.832.313.136 (1)171
C10—H15···Cl1iii0.992.873.846 (1)168
C12—H20···Cl1iv0.972.843.779 (3)161
C12—H19···O1v0.992.733.448 (2)130
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N2—H3⋯Cl10.902.183.069 (1)169
N2—H4⋯O1i0.911.862.776 (2)175
O1—H1⋯Cl10.822.323.120 (1)165
O1—H2⋯Cl1ii0.832.313.136 (1)171
C10—H15⋯Cl1iii0.992.873.846 (1)168
C12—H20⋯Cl1iv0.972.843.779 (3)161
C12—H19⋯O1v0.992.733.448 (2)130

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

  2 in total

1.  Artificial Organic Host Molecules for Anions.

Authors:  Franz P. Schmidtchen; Michael Berger
Journal:  Chem Rev       Date:  1997-08-05       Impact factor: 60.622

2.  Chloride complexation by heptapeptides: influence of C- and N-terminal sidechains and counterion.

Authors:  Robert Pajewski; Riccardo Ferdani; Paul H Schlesinger; George W Gokel
Journal:  Chem Commun (Camb)       Date:  2003-12-05       Impact factor: 6.222

  2 in total

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