| Literature DB >> 21202977 |
Li-He Yin1, Rong Wan, Feng Han, Bin Wang, Jin-Tang Wang.
Abstract
The title compound, C(18)H(14)FN(3)O(2)S(2), was synthesized by the reaction of 5-(4-fluoro-phen-yl)-N-(4-methoxy-benzyl-idene)-1,3,4-thia-diazol-2-amine and mercaptoacetic acid. The thia-zolidinone ring adopts a twist conformation. The 4-methoxy-phenyl ring is almost perpendicular to the thia-diazole ring, making a dihedral angle of 88.4 (3)°. The 4-fluoro-phenyl ring is nearly coplanar with the thia-diazole ring, the dihedral angle being 6.8 (3)°. The crystal structure involves C-H⋯N, C-H⋯O and C-H⋯S hydrogen bonds.Entities:
Year: 2008 PMID: 21202977 PMCID: PMC2961680 DOI: 10.1107/S1600536808019089
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C18H14FN3O2S2 | |
| Triclinic, | |
| Hall symbol: -P 1 | Melting point = 341–345 K |
| Mo | |
| Cell parameters from 25 reflections | |
| θ = 9–12º | |
| α = 75.78 (3)º | µ = 0.34 mm−1 |
| β = 82.44 (3)º | |
| γ = 71.11 (3)º | Block, colourless |
| 0.10 × 0.05 × 0.05 mm |
| Enraf–Nonius CAD-4 diffractometer | |
| Radiation source: fine-focus sealed tube | θmax = 25.2º |
| Monochromator: graphite | θmin = 1.3º |
| ω/2θ scans | |
| Absorption correction: ψ scan(North | |
| 3 standard reflections | |
| 3421 measured reflections | every 200 reflections |
| 3120 independent reflections | intensity decay: none |
| 2054 reflections with |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| | |
| (Δ/σ)max < 0.001 | |
| 3120 reflections | Δρmax = 0.41 e Å−3 |
| 229 parameters | Δρmin = −0.52 e Å−3 |
| 48 restraints | Extinction correction: none |
| Primary atom site location: structure-invariant direct methods |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| S1 | 0.1232 (3) | 1.32787 (19) | 0.18123 (10) | 0.0698 (5) | |
| S2 | 0.7085 (2) | 0.94841 (16) | 0.40097 (8) | 0.0525 (4) | |
| F | 1.1681 (6) | 0.3585 (4) | 0.7202 (2) | 0.0868 (11) | |
| O1 | 0.3391 (7) | 0.6926 (6) | 0.0237 (3) | 0.0873 (14) | |
| O2 | 0.6785 (6) | 1.2181 (5) | 0.2766 (2) | 0.0669 (11) | |
| N1 | 0.4009 (7) | 1.1081 (5) | 0.2832 (3) | 0.0524 (10) | |
| N2 | 0.3572 (7) | 0.8821 (6) | 0.3839 (3) | 0.0624 (12) | |
| N3 | 0.4550 (7) | 0.7685 (6) | 0.4514 (3) | 0.0615 (12) | |
| C1 | 0.1565 (11) | 0.6619 (9) | −0.0019 (4) | 0.084 (2) | |
| H1A | 0.2071 | 0.5921 | −0.0410 | 0.126* | |
| H1B | 0.0557 | 0.7626 | −0.0281 | 0.126* | |
| H1C | 0.0839 | 0.6105 | 0.0462 | 0.126* | |
| C2 | 0.2971 (9) | 0.7920 (7) | 0.0792 (4) | 0.0628 (14) | |
| C3 | 0.0998 (10) | 0.8504 (8) | 0.1184 (4) | 0.0731 (16) | |
| H3B | −0.0205 | 0.8231 | 0.1084 | 0.088* | |
| C4 | 0.0759 (9) | 0.9502 (8) | 0.1733 (4) | 0.0687 (16) | |
| H4A | −0.0604 | 0.9869 | 0.2006 | 0.082* | |
| C5 | 0.2469 (8) | 0.9971 (7) | 0.1889 (3) | 0.0550 (12) | |
| C6 | 0.4424 (11) | 0.9355 (10) | 0.1499 (5) | 0.107 (3) | |
| H6A | 0.5630 | 0.9621 | 0.1602 | 0.128* | |
| C7 | 0.4704 (12) | 0.8350 (10) | 0.0956 (5) | 0.109 | |
| H7A | 0.6079 | 0.7959 | 0.0697 | 0.131* | |
| C8 | 0.2051 (8) | 1.1190 (6) | 0.2422 (3) | 0.0544 (13) | |
| H8A | 0.0890 | 1.1042 | 0.2852 | 0.065* | |
| C9 | 0.3907 (10) | 1.3489 (8) | 0.1783 (4) | 0.0770 (18) | |
| H9A | 0.4707 | 1.3304 | 0.1258 | 0.092* | |
| H9B | 0.3797 | 1.4573 | 0.1835 | 0.092* | |
| C10 | 0.5063 (9) | 1.2245 (7) | 0.2508 (3) | 0.0567 (13) | |
| C11 | 0.4717 (8) | 0.9827 (6) | 0.3532 (3) | 0.0505 (12) | |
| C12 | 0.6418 (8) | 0.7842 (6) | 0.4677 (3) | 0.0470 (11) | |
| C13 | 0.7762 (8) | 0.6774 (6) | 0.5357 (3) | 0.0480 (11) | |
| C14 | 0.9628 (9) | 0.7058 (7) | 0.5547 (3) | 0.0608 (14) | |
| H14A | 1.0009 | 0.7966 | 0.5243 | 0.073* | |
| C15 | 1.0908 (10) | 0.6009 (7) | 0.6181 (4) | 0.0668 (15) | |
| H15A | 1.2114 | 0.6223 | 0.6324 | 0.080* | |
| C16 | 1.0368 (9) | 0.4640 (7) | 0.6596 (3) | 0.0613 (15) | |
| C17 | 0.8542 (10) | 0.4310 (7) | 0.6425 (3) | 0.0647 (15) | |
| H17A | 0.8189 | 0.3390 | 0.6728 | 0.078* | |
| C18 | 0.7262 (9) | 0.5372 (6) | 0.5799 (3) | 0.0584 (14) | |
| H18A | 0.6044 | 0.5156 | 0.5668 | 0.070* |
| S1 | 0.0724 (10) | 0.0617 (9) | 0.0743 (10) | −0.0157 (8) | −0.0163 (8) | −0.0123 (8) |
| S2 | 0.0476 (7) | 0.0587 (8) | 0.0565 (8) | −0.0219 (6) | −0.0011 (6) | −0.0152 (6) |
| F | 0.092 (3) | 0.081 (2) | 0.075 (2) | −0.008 (2) | −0.022 (2) | −0.0116 (19) |
| O1 | 0.085 (3) | 0.102 (3) | 0.098 (3) | −0.038 (3) | 0.013 (3) | −0.059 (3) |
| O2 | 0.054 (2) | 0.069 (3) | 0.081 (3) | −0.0299 (19) | −0.005 (2) | −0.008 (2) |
| N1 | 0.052 (2) | 0.056 (3) | 0.056 (3) | −0.023 (2) | 0.000 (2) | −0.017 (2) |
| N2 | 0.057 (3) | 0.064 (3) | 0.069 (3) | −0.029 (2) | −0.007 (2) | −0.003 (2) |
| N3 | 0.058 (3) | 0.068 (3) | 0.063 (3) | −0.028 (2) | −0.007 (2) | −0.008 (2) |
| C1 | 0.100 (5) | 0.094 (5) | 0.075 (4) | −0.038 (4) | −0.012 (4) | −0.032 (4) |
| C2 | 0.064 (3) | 0.061 (3) | 0.067 (3) | −0.015 (3) | −0.002 (3) | −0.027 (3) |
| C3 | 0.064 (3) | 0.089 (4) | 0.077 (4) | −0.026 (3) | 0.003 (3) | −0.038 (3) |
| C4 | 0.051 (3) | 0.090 (4) | 0.072 (4) | −0.024 (3) | 0.011 (3) | −0.035 (3) |
| C5 | 0.050 (3) | 0.062 (3) | 0.054 (3) | −0.016 (2) | −0.004 (2) | −0.014 (2) |
| C6 | 0.062 (4) | 0.139 (6) | 0.152 (6) | −0.034 (4) | 0.011 (4) | −0.096 (5) |
| C7 | 0.070 | 0.148 | 0.146 | −0.040 | 0.021 | −0.105 |
| C8 | 0.046 (3) | 0.059 (3) | 0.061 (3) | −0.018 (2) | −0.003 (2) | −0.016 (3) |
| C9 | 0.083 (4) | 0.081 (4) | 0.065 (4) | −0.037 (4) | 0.005 (3) | −0.001 (3) |
| C10 | 0.055 (3) | 0.061 (3) | 0.058 (3) | −0.024 (3) | 0.008 (3) | −0.017 (3) |
| C11 | 0.049 (3) | 0.057 (3) | 0.051 (3) | −0.021 (2) | 0.004 (2) | −0.018 (2) |
| C12 | 0.046 (3) | 0.047 (3) | 0.047 (3) | −0.013 (2) | 0.005 (2) | −0.014 (2) |
| C13 | 0.042 (3) | 0.050 (3) | 0.048 (3) | −0.007 (2) | 0.006 (2) | −0.016 (2) |
| C14 | 0.060 (3) | 0.072 (4) | 0.057 (3) | −0.028 (3) | 0.001 (3) | −0.016 (3) |
| C15 | 0.065 (4) | 0.075 (4) | 0.061 (4) | −0.014 (3) | −0.015 (3) | −0.019 (3) |
| C16 | 0.065 (4) | 0.059 (3) | 0.045 (3) | 0.003 (3) | −0.012 (3) | −0.008 (3) |
| C17 | 0.074 (4) | 0.058 (3) | 0.058 (3) | −0.018 (3) | −0.004 (3) | −0.005 (3) |
| C18 | 0.060 (3) | 0.059 (3) | 0.063 (3) | −0.027 (3) | 0.000 (3) | −0.017 (3) |
| S1—C9 | 1.790 (6) | C4—H4A | 0.9300 |
| S1—C8 | 1.828 (5) | C5—C6 | 1.349 (8) |
| S2—C11 | 1.716 (5) | C5—C8 | 1.497 (7) |
| S2—C12 | 1.741 (5) | C6—C7 | 1.373 (9) |
| F—C16 | 1.359 (6) | C6—H6A | 0.9300 |
| O1—C2 | 1.368 (6) | C7—H7A | 0.9300 |
| O1—C1 | 1.428 (7) | C8—H8A | 0.9800 |
| O2—C10 | 1.221 (6) | C9—C10 | 1.504 (8) |
| N1—C10 | 1.384 (6) | C9—H9A | 0.9700 |
| N1—C11 | 1.402 (6) | C9—H9B | 0.9700 |
| N1—C8 | 1.475 (6) | C12—C13 | 1.454 (7) |
| N2—C11 | 1.309 (6) | C13—C14 | 1.396 (7) |
| N2—N3 | 1.371 (6) | C13—C18 | 1.396 (7) |
| N3—C12 | 1.326 (6) | C14—C15 | 1.377 (8) |
| C1—H1A | 0.9600 | C14—H14A | 0.9300 |
| C1—H1B | 0.9600 | C15—C16 | 1.373 (8) |
| C1—H1C | 0.9600 | C15—H15A | 0.9300 |
| C2—C3 | 1.354 (8) | C16—C17 | 1.381 (8) |
| C2—C7 | 1.371 (8) | C17—C18 | 1.372 (7) |
| C3—C4 | 1.380 (8) | C17—H17A | 0.9300 |
| C3—H3B | 0.9300 | C18—H18A | 0.9300 |
| C4—C5 | 1.373 (7) | ||
| C9—S1—C8 | 93.5 (3) | C5—C8—H8A | 109.0 |
| C11—S2—C12 | 85.8 (2) | S1—C8—H8A | 109.0 |
| C2—O1—C1 | 117.6 (5) | C10—C9—S1 | 106.9 (4) |
| C10—N1—C11 | 122.7 (4) | C10—C9—H9A | 110.3 |
| C10—N1—C8 | 118.0 (4) | S1—C9—H9A | 110.3 |
| C11—N1—C8 | 119.3 (4) | C10—C9—H9B | 110.3 |
| C11—N2—N3 | 110.4 (4) | S1—C9—H9B | 110.3 |
| C12—N3—N2 | 113.4 (4) | H9A—C9—H9B | 108.6 |
| O1—C1—H1A | 109.5 | O2—C10—N1 | 122.5 (5) |
| O1—C1—H1B | 109.5 | O2—C10—C9 | 125.7 (5) |
| H1A—C1—H1B | 109.5 | N1—C10—C9 | 111.7 (5) |
| O1—C1—H1C | 109.5 | N2—C11—N1 | 119.7 (4) |
| H1A—C1—H1C | 109.5 | N2—C11—S2 | 116.8 (4) |
| H1B—C1—H1C | 109.5 | N1—C11—S2 | 123.4 (4) |
| C3—C2—O1 | 125.2 (5) | N3—C12—C13 | 123.5 (5) |
| C3—C2—C7 | 118.1 (6) | N3—C12—S2 | 113.5 (4) |
| O1—C2—C7 | 116.7 (5) | C13—C12—S2 | 123.0 (4) |
| C2—C3—C4 | 120.4 (6) | C14—C13—C18 | 118.8 (5) |
| C2—C3—H3B | 119.8 | C14—C13—C12 | 121.6 (5) |
| C4—C3—H3B | 119.8 | C18—C13—C12 | 119.5 (5) |
| C5—C4—C3 | 122.1 (5) | C15—C14—C13 | 120.7 (5) |
| C5—C4—H4A | 118.9 | C15—C14—H14A | 119.7 |
| C3—C4—H4A | 118.9 | C13—C14—H14A | 119.7 |
| C6—C5—C4 | 116.3 (5) | C16—C15—C14 | 118.6 (5) |
| C6—C5—C8 | 124.1 (5) | C16—C15—H15A | 120.7 |
| C4—C5—C8 | 119.5 (5) | C14—C15—H15A | 120.7 |
| C5—C6—C7 | 122.5 (6) | F—C16—C15 | 118.2 (5) |
| C5—C6—H6A | 118.7 | F—C16—C17 | 119.3 (6) |
| C7—C6—H6A | 118.7 | C15—C16—C17 | 122.5 (5) |
| C2—C7—C6 | 120.5 (6) | C18—C17—C16 | 118.5 (5) |
| C2—C7—H7A | 119.7 | C18—C17—H17A | 120.8 |
| C6—C7—H7A | 119.7 | C16—C17—H17A | 120.8 |
| N1—C8—C5 | 113.5 (4) | C17—C18—C13 | 120.9 (5) |
| N1—C8—S1 | 103.5 (3) | C17—C18—H18A | 119.6 |
| C5—C8—S1 | 112.5 (4) | C13—C18—H18A | 119.6 |
| N1—C8—H8A | 109.0 | ||
| C11—N2—N3—C12 | −1.9 (6) | S1—C9—C10—O2 | −168.3 (5) |
| C1—O1—C2—C3 | 7.2 (9) | S1—C9—C10—N1 | 15.5 (6) |
| C1—O1—C2—C7 | −172.7 (7) | N3—N2—C11—N1 | 179.5 (4) |
| O1—C2—C3—C4 | −180.0 (6) | N3—N2—C11—S2 | 1.2 (6) |
| C7—C2—C3—C4 | 0.0 (10) | C10—N1—C11—N2 | 175.9 (5) |
| C2—C3—C4—C5 | 1.5 (10) | C8—N1—C11—N2 | −3.5 (7) |
| C3—C4—C5—C6 | −2.3 (10) | C10—N1—C11—S2 | −5.9 (7) |
| C3—C4—C5—C8 | 173.7 (6) | C8—N1—C11—S2 | 174.7 (4) |
| C4—C5—C6—C7 | 1.8 (12) | C12—S2—C11—N2 | −0.2 (4) |
| C8—C5—C6—C7 | −174.0 (7) | C12—S2—C11—N1 | −178.4 (4) |
| C3—C2—C7—C6 | −0.5 (12) | N2—N3—C12—C13 | −179.5 (4) |
| O1—C2—C7—C6 | 179.5 (8) | N2—N3—C12—S2 | 1.8 (6) |
| C5—C6—C7—C2 | −0.4 (14) | C11—S2—C12—N3 | −0.9 (4) |
| C10—N1—C8—C5 | 104.3 (5) | C11—S2—C12—C13 | −179.7 (4) |
| C11—N1—C8—C5 | −76.2 (6) | N3—C12—C13—C14 | −174.9 (5) |
| C10—N1—C8—S1 | −17.9 (5) | S2—C12—C13—C14 | 3.7 (7) |
| C11—N1—C8—S1 | 161.6 (4) | N3—C12—C13—C18 | 9.1 (7) |
| C6—C5—C8—N1 | −28.9 (9) | S2—C12—C13—C18 | −172.3 (4) |
| C4—C5—C8—N1 | 155.4 (5) | C18—C13—C14—C15 | −2.4 (8) |
| C6—C5—C8—S1 | 88.3 (7) | C12—C13—C14—C15 | −178.4 (5) |
| C4—C5—C8—S1 | −87.4 (6) | C13—C14—C15—C16 | 2.8 (8) |
| C9—S1—C8—N1 | 22.4 (4) | C14—C15—C16—F | 177.9 (5) |
| C9—S1—C8—C5 | −100.6 (4) | C14—C15—C16—C17 | −2.6 (9) |
| C8—S1—C9—C10 | −22.2 (5) | F—C16—C17—C18 | −178.7 (5) |
| C11—N1—C10—O2 | 6.3 (8) | C15—C16—C17—C18 | 1.9 (9) |
| C8—N1—C10—O2 | −174.3 (5) | C16—C17—C18—C13 | −1.4 (8) |
| C11—N1—C10—C9 | −177.4 (5) | C14—C13—C18—C17 | 1.6 (8) |
| C8—N1—C10—C9 | 2.1 (7) | C12—C13—C18—C17 | 177.7 (5) |
| H··· | ||||
| C6—H6A···N1 | 0.93 | 2.60 | 2.917 (9) | 101 |
| C8—H8A···O2i | 0.98 | 2.52 | 3.233 (7) | 129 |
| C14—H14A···S2 | 0.93 | 2.74 | 3.146 (6) | 107 |
| C18—H18A···N3 | 0.93 | 2.57 | 2.881 (7) | 100 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| C6—H6 | 0.93 | 2.60 | 2.917 (9) | 101 |
| C8—H8 | 0.98 | 2.52 | 3.233 (7) | 129 |
| C14—H14 | 0.93 | 2.74 | 3.146 (6) | 107 |
| C18—H18 | 0.93 | 2.57 | 2.881 (7) | 100 |
Symmetry code: (i) .