Literature DB >> 21202977

3-[5-(4-Fluoro-phen-yl)-1,3,4-thia-diazol-2-yl]-2-(4-methoxy-phen-yl)-1,3-thia-zolidin-4-one.

Li-He Yin1, Rong Wan, Feng Han, Bin Wang, Jin-Tang Wang.   

Abstract

The title compound, C(18)H(14)FN(3)O(2)S(2), was synthesized by the reaction of 5-(4-fluoro-phen-yl)-N-(4-methoxy-benzyl-idene)-1,3,4-thia-diazol-2-amine and mercaptoacetic acid. The thia-zolidinone ring adopts a twist conformation. The 4-methoxy-phenyl ring is almost perpendicular to the thia-diazole ring, making a dihedral angle of 88.4 (3)°. The 4-fluoro-phenyl ring is nearly coplanar with the thia-diazole ring, the dihedral angle being 6.8 (3)°. The crystal structure involves C-H⋯N, C-H⋯O and C-H⋯S hydrogen bonds.

Entities:  

Year:  2008        PMID: 21202977      PMCID: PMC2961680          DOI: 10.1107/S1600536808019089

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For related literature, see: Arun et al. (1999 ▶); Chen et al. (2000 ▶); Kidwai et al. (2000 ▶); Vicentini et al. (1998 ▶); Wasfy et al. (1996 ▶); Allen et al. (1987 ▶).

Experimental

Crystal data

C18H14FN3O2S2 M = 387.44 Triclinic, a = 6.4550 (13) Å b = 8.9200 (18) Å c = 16.483 (3) Å α = 75.78 (3)° β = 82.44 (3)° γ = 71.11 (3)° V = 869.0 (3) Å3 Z = 2 Mo Kα radiation μ = 0.34 mm−1 T = 298 (2) K 0.10 × 0.05 × 0.05 mm

Data collection

Enraf–Nonius CAD-4 diffractometer Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.967, T max = 0.984 3421 measured reflections 3120 independent reflections 2054 reflections with I > 2σ(I) R int = 0.023 3 standard reflections every 200 reflections intensity decay: none

Refinement

R[F 2 > 2σ(F 2)] = 0.070 wR(F 2) = 0.186 S = 1.00 3120 reflections 229 parameters 48 restraints H-atom parameters constrained Δρmax = 0.41 e Å−3 Δρmin = −0.52 e Å−3 Data collection: CAD-4 Software (Enraf–Nonius, 1989 ▶); cell refinement: CAD-4 Software; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: SHELXTL (Sheldrick, 2008 ▶); software used to prepare material for publication: SHELXTL. Crystal structure: contains datablocks global, I. DOI: 10.1107/S1600536808019089/at2579sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536808019089/at2579Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
C18H14FN3O2S2Z = 2
Mr = 387.44F000 = 400
Triclinic, P1Dx = 1.481 Mg m3
Hall symbol: -P 1Melting point = 341–345 K
a = 6.4550 (13) ÅMo Kα radiation λ = 0.71073 Å
b = 8.9200 (18) ÅCell parameters from 25 reflections
c = 16.483 (3) Åθ = 9–12º
α = 75.78 (3)ºµ = 0.34 mm1
β = 82.44 (3)ºT = 298 (2) K
γ = 71.11 (3)ºBlock, colourless
V = 869.0 (3) Å30.10 × 0.05 × 0.05 mm
Enraf–Nonius CAD-4 diffractometerRint = 0.023
Radiation source: fine-focus sealed tubeθmax = 25.2º
Monochromator: graphiteθmin = 1.3º
T = 298(2) Kh = −7→7
ω/2θ scansk = −10→10
Absorption correction: ψ scan(North et al., 1968)l = 0→19
Tmin = 0.967, Tmax = 0.9843 standard reflections
3421 measured reflections every 200 reflections
3120 independent reflections intensity decay: none
2054 reflections with I > 2σ(I)
Refinement on F2Secondary atom site location: difference Fourier map
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.070H-atom parameters constrained
wR(F2) = 0.186  w = 1/[σ2(Fo2) + (0.05P)2 + 2.5P] where P = (Fo2 + 2Fc2)/3
S = 1.00(Δ/σ)max < 0.001
3120 reflectionsΔρmax = 0.41 e Å3
229 parametersΔρmin = −0.52 e Å3
48 restraintsExtinction correction: none
Primary atom site location: structure-invariant direct methods
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.1232 (3)1.32787 (19)0.18123 (10)0.0698 (5)
S20.7085 (2)0.94841 (16)0.40097 (8)0.0525 (4)
F1.1681 (6)0.3585 (4)0.7202 (2)0.0868 (11)
O10.3391 (7)0.6926 (6)0.0237 (3)0.0873 (14)
O20.6785 (6)1.2181 (5)0.2766 (2)0.0669 (11)
N10.4009 (7)1.1081 (5)0.2832 (3)0.0524 (10)
N20.3572 (7)0.8821 (6)0.3839 (3)0.0624 (12)
N30.4550 (7)0.7685 (6)0.4514 (3)0.0615 (12)
C10.1565 (11)0.6619 (9)−0.0019 (4)0.084 (2)
H1A0.20710.5921−0.04100.126*
H1B0.05570.7626−0.02810.126*
H1C0.08390.61050.04620.126*
C20.2971 (9)0.7920 (7)0.0792 (4)0.0628 (14)
C30.0998 (10)0.8504 (8)0.1184 (4)0.0731 (16)
H3B−0.02050.82310.10840.088*
C40.0759 (9)0.9502 (8)0.1733 (4)0.0687 (16)
H4A−0.06040.98690.20060.082*
C50.2469 (8)0.9971 (7)0.1889 (3)0.0550 (12)
C60.4424 (11)0.9355 (10)0.1499 (5)0.107 (3)
H6A0.56300.96210.16020.128*
C70.4704 (12)0.8350 (10)0.0956 (5)0.109
H7A0.60790.79590.06970.131*
C80.2051 (8)1.1190 (6)0.2422 (3)0.0544 (13)
H8A0.08901.10420.28520.065*
C90.3907 (10)1.3489 (8)0.1783 (4)0.0770 (18)
H9A0.47071.33040.12580.092*
H9B0.37971.45730.18350.092*
C100.5063 (9)1.2245 (7)0.2508 (3)0.0567 (13)
C110.4717 (8)0.9827 (6)0.3532 (3)0.0505 (12)
C120.6418 (8)0.7842 (6)0.4677 (3)0.0470 (11)
C130.7762 (8)0.6774 (6)0.5357 (3)0.0480 (11)
C140.9628 (9)0.7058 (7)0.5547 (3)0.0608 (14)
H14A1.00090.79660.52430.073*
C151.0908 (10)0.6009 (7)0.6181 (4)0.0668 (15)
H15A1.21140.62230.63240.080*
C161.0368 (9)0.4640 (7)0.6596 (3)0.0613 (15)
C170.8542 (10)0.4310 (7)0.6425 (3)0.0647 (15)
H17A0.81890.33900.67280.078*
C180.7262 (9)0.5372 (6)0.5799 (3)0.0584 (14)
H18A0.60440.51560.56680.070*
U11U22U33U12U13U23
S10.0724 (10)0.0617 (9)0.0743 (10)−0.0157 (8)−0.0163 (8)−0.0123 (8)
S20.0476 (7)0.0587 (8)0.0565 (8)−0.0219 (6)−0.0011 (6)−0.0152 (6)
F0.092 (3)0.081 (2)0.075 (2)−0.008 (2)−0.022 (2)−0.0116 (19)
O10.085 (3)0.102 (3)0.098 (3)−0.038 (3)0.013 (3)−0.059 (3)
O20.054 (2)0.069 (3)0.081 (3)−0.0299 (19)−0.005 (2)−0.008 (2)
N10.052 (2)0.056 (3)0.056 (3)−0.023 (2)0.000 (2)−0.017 (2)
N20.057 (3)0.064 (3)0.069 (3)−0.029 (2)−0.007 (2)−0.003 (2)
N30.058 (3)0.068 (3)0.063 (3)−0.028 (2)−0.007 (2)−0.008 (2)
C10.100 (5)0.094 (5)0.075 (4)−0.038 (4)−0.012 (4)−0.032 (4)
C20.064 (3)0.061 (3)0.067 (3)−0.015 (3)−0.002 (3)−0.027 (3)
C30.064 (3)0.089 (4)0.077 (4)−0.026 (3)0.003 (3)−0.038 (3)
C40.051 (3)0.090 (4)0.072 (4)−0.024 (3)0.011 (3)−0.035 (3)
C50.050 (3)0.062 (3)0.054 (3)−0.016 (2)−0.004 (2)−0.014 (2)
C60.062 (4)0.139 (6)0.152 (6)−0.034 (4)0.011 (4)−0.096 (5)
C70.0700.1480.146−0.0400.021−0.105
C80.046 (3)0.059 (3)0.061 (3)−0.018 (2)−0.003 (2)−0.016 (3)
C90.083 (4)0.081 (4)0.065 (4)−0.037 (4)0.005 (3)−0.001 (3)
C100.055 (3)0.061 (3)0.058 (3)−0.024 (3)0.008 (3)−0.017 (3)
C110.049 (3)0.057 (3)0.051 (3)−0.021 (2)0.004 (2)−0.018 (2)
C120.046 (3)0.047 (3)0.047 (3)−0.013 (2)0.005 (2)−0.014 (2)
C130.042 (3)0.050 (3)0.048 (3)−0.007 (2)0.006 (2)−0.016 (2)
C140.060 (3)0.072 (4)0.057 (3)−0.028 (3)0.001 (3)−0.016 (3)
C150.065 (4)0.075 (4)0.061 (4)−0.014 (3)−0.015 (3)−0.019 (3)
C160.065 (4)0.059 (3)0.045 (3)0.003 (3)−0.012 (3)−0.008 (3)
C170.074 (4)0.058 (3)0.058 (3)−0.018 (3)−0.004 (3)−0.005 (3)
C180.060 (3)0.059 (3)0.063 (3)−0.027 (3)0.000 (3)−0.017 (3)
S1—C91.790 (6)C4—H4A0.9300
S1—C81.828 (5)C5—C61.349 (8)
S2—C111.716 (5)C5—C81.497 (7)
S2—C121.741 (5)C6—C71.373 (9)
F—C161.359 (6)C6—H6A0.9300
O1—C21.368 (6)C7—H7A0.9300
O1—C11.428 (7)C8—H8A0.9800
O2—C101.221 (6)C9—C101.504 (8)
N1—C101.384 (6)C9—H9A0.9700
N1—C111.402 (6)C9—H9B0.9700
N1—C81.475 (6)C12—C131.454 (7)
N2—C111.309 (6)C13—C141.396 (7)
N2—N31.371 (6)C13—C181.396 (7)
N3—C121.326 (6)C14—C151.377 (8)
C1—H1A0.9600C14—H14A0.9300
C1—H1B0.9600C15—C161.373 (8)
C1—H1C0.9600C15—H15A0.9300
C2—C31.354 (8)C16—C171.381 (8)
C2—C71.371 (8)C17—C181.372 (7)
C3—C41.380 (8)C17—H17A0.9300
C3—H3B0.9300C18—H18A0.9300
C4—C51.373 (7)
C9—S1—C893.5 (3)C5—C8—H8A109.0
C11—S2—C1285.8 (2)S1—C8—H8A109.0
C2—O1—C1117.6 (5)C10—C9—S1106.9 (4)
C10—N1—C11122.7 (4)C10—C9—H9A110.3
C10—N1—C8118.0 (4)S1—C9—H9A110.3
C11—N1—C8119.3 (4)C10—C9—H9B110.3
C11—N2—N3110.4 (4)S1—C9—H9B110.3
C12—N3—N2113.4 (4)H9A—C9—H9B108.6
O1—C1—H1A109.5O2—C10—N1122.5 (5)
O1—C1—H1B109.5O2—C10—C9125.7 (5)
H1A—C1—H1B109.5N1—C10—C9111.7 (5)
O1—C1—H1C109.5N2—C11—N1119.7 (4)
H1A—C1—H1C109.5N2—C11—S2116.8 (4)
H1B—C1—H1C109.5N1—C11—S2123.4 (4)
C3—C2—O1125.2 (5)N3—C12—C13123.5 (5)
C3—C2—C7118.1 (6)N3—C12—S2113.5 (4)
O1—C2—C7116.7 (5)C13—C12—S2123.0 (4)
C2—C3—C4120.4 (6)C14—C13—C18118.8 (5)
C2—C3—H3B119.8C14—C13—C12121.6 (5)
C4—C3—H3B119.8C18—C13—C12119.5 (5)
C5—C4—C3122.1 (5)C15—C14—C13120.7 (5)
C5—C4—H4A118.9C15—C14—H14A119.7
C3—C4—H4A118.9C13—C14—H14A119.7
C6—C5—C4116.3 (5)C16—C15—C14118.6 (5)
C6—C5—C8124.1 (5)C16—C15—H15A120.7
C4—C5—C8119.5 (5)C14—C15—H15A120.7
C5—C6—C7122.5 (6)F—C16—C15118.2 (5)
C5—C6—H6A118.7F—C16—C17119.3 (6)
C7—C6—H6A118.7C15—C16—C17122.5 (5)
C2—C7—C6120.5 (6)C18—C17—C16118.5 (5)
C2—C7—H7A119.7C18—C17—H17A120.8
C6—C7—H7A119.7C16—C17—H17A120.8
N1—C8—C5113.5 (4)C17—C18—C13120.9 (5)
N1—C8—S1103.5 (3)C17—C18—H18A119.6
C5—C8—S1112.5 (4)C13—C18—H18A119.6
N1—C8—H8A109.0
C11—N2—N3—C12−1.9 (6)S1—C9—C10—O2−168.3 (5)
C1—O1—C2—C37.2 (9)S1—C9—C10—N115.5 (6)
C1—O1—C2—C7−172.7 (7)N3—N2—C11—N1179.5 (4)
O1—C2—C3—C4−180.0 (6)N3—N2—C11—S21.2 (6)
C7—C2—C3—C40.0 (10)C10—N1—C11—N2175.9 (5)
C2—C3—C4—C51.5 (10)C8—N1—C11—N2−3.5 (7)
C3—C4—C5—C6−2.3 (10)C10—N1—C11—S2−5.9 (7)
C3—C4—C5—C8173.7 (6)C8—N1—C11—S2174.7 (4)
C4—C5—C6—C71.8 (12)C12—S2—C11—N2−0.2 (4)
C8—C5—C6—C7−174.0 (7)C12—S2—C11—N1−178.4 (4)
C3—C2—C7—C6−0.5 (12)N2—N3—C12—C13−179.5 (4)
O1—C2—C7—C6179.5 (8)N2—N3—C12—S21.8 (6)
C5—C6—C7—C2−0.4 (14)C11—S2—C12—N3−0.9 (4)
C10—N1—C8—C5104.3 (5)C11—S2—C12—C13−179.7 (4)
C11—N1—C8—C5−76.2 (6)N3—C12—C13—C14−174.9 (5)
C10—N1—C8—S1−17.9 (5)S2—C12—C13—C143.7 (7)
C11—N1—C8—S1161.6 (4)N3—C12—C13—C189.1 (7)
C6—C5—C8—N1−28.9 (9)S2—C12—C13—C18−172.3 (4)
C4—C5—C8—N1155.4 (5)C18—C13—C14—C15−2.4 (8)
C6—C5—C8—S188.3 (7)C12—C13—C14—C15−178.4 (5)
C4—C5—C8—S1−87.4 (6)C13—C14—C15—C162.8 (8)
C9—S1—C8—N122.4 (4)C14—C15—C16—F177.9 (5)
C9—S1—C8—C5−100.6 (4)C14—C15—C16—C17−2.6 (9)
C8—S1—C9—C10−22.2 (5)F—C16—C17—C18−178.7 (5)
C11—N1—C10—O26.3 (8)C15—C16—C17—C181.9 (9)
C8—N1—C10—O2−174.3 (5)C16—C17—C18—C13−1.4 (8)
C11—N1—C10—C9−177.4 (5)C14—C13—C18—C171.6 (8)
C8—N1—C10—C92.1 (7)C12—C13—C18—C17177.7 (5)
D—H···AD—HH···AD···AD—H···A
C6—H6A···N10.932.602.917 (9)101
C8—H8A···O2i0.982.523.233 (7)129
C14—H14A···S20.932.743.146 (6)107
C18—H18A···N30.932.572.881 (7)100
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
C6—H6A⋯N10.932.602.917 (9)101
C8—H8A⋯O2i0.982.523.233 (7)129
C14—H14A⋯S20.932.743.146 (6)107
C18—H18A⋯N30.932.572.881 (7)100

Symmetry code: (i) .

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